Reactivity of mitomycin C with synthetic polyribonucleotides containing guanine or guanine analogs

The guanine residues in nucleic acids are believed to be the major covalent binding site of the antibiotic mitomycin C. To identify the specific functional group in guanine which reacts with mitomycin C, reactions were run between the antibiotic and poly(G) analogs in which guanine was blocked at the N-7 or O-6 position, or lacked the 2-amino group. Binding ratios were affected to a small extent in the two former cases, but binding was significantly decreased in the absence of the 2-amino group. These results indicate that the most likely binding site of mitomycin C in synthetic polyribonucleotides is the 2-amino group of guanine residues.     

Haemoprotein formation in yeast

Summary A procedure was described for the isolation of mutants affected in the regulation of catalase activity. Two such mutants, cgr 1 and cgr 2 were obtained. Both of them show catalase activity that is resistant to repression by glucose, but is sensitive to anoxia to the same extent as the wild type.     

RNAlyzer—novel approach for quality analysis of RNA structural models

The continuously increasing amount of RNA sequence and experimentally determined 3D structure data drives the development of computational methods supporting exploration of these data. Contemporary functional analysis of RNA molecules, such as ribozymes or riboswitches, covers various issues, among which tertiary structure modeling becomes more and more important. A growing number of tools to model and predict RNA structure calls for an evaluation of these tools and the quality of outcomes their produce. Thus, the development of reliable methods designed to meet this need is relevant in the context of RNA tertiary structure analysis and can highly influence the quality and usefulness of RNA tertiary structure prediction in the nearest future. Here, we present RNAlyzer—a computational method for comparison of RNA 3D models with the reference structure and for discrimination between the correct and incorrect models. Our approach is based on the idea of local neighborhood, defined as a set of atoms included in the sphere centered around a user-defined atom. A unique feature of the RNAlyzer is the simultaneous visualization of the model-reference structure distance at different levels of detail, from the individual residues to the entire molecules.     

Biological effects of lipoteichoic acids.

Pneumococcal lipoteichoic acid (Forssman antigen) added to the medium of growing pneumococcal cultures caused chain formation, prevented culture lysis in the stationary phase of growth, and inhibited lysis by penicillin and by the pneumococcal bacteriophage Dp-1.     

Temporal dynamics of bird community composition: an analysis of baseline conditions from long-term data

Numerous anthropogenic activities threaten the biodiversity found on earth. Because all ecological communities constantly experience temporal turnover due to natural processes, it is important to distinguish between change due to anthropogenic impact and the underlying natural rate of change. In this study, we used data sets on breeding bird communities that covered at least 20 consecutive years, from a variety of terrestrial ecosystems, to address two main questions. (1) How fast does the composition of bird communities change over time, and can we identify a baseline of natural change that distinguishes primeval systems from systems experiencing varying degrees of human impact? (2) How do patterns of temporal variation in composition vary among bird communities in ecosystems with different anthropogenic impacts? Time lag analysis (TLA) showed a pattern of increasing rate of temporal compositional change from large-scale primeval systems to disturbed and protected systems to distinctly successional systems. TLA slopes of <0.04 were typical for breeding bird communities with natural turnover, while communities subjected to anthropogenic impact were characterised by TLA slopes of >0.04. Most of the temporal variability of breeding bird communities was explained by slow changes occurring over decades, regardless of the intensity of human impact. In most of the time series, medium- and short-wave periodicity was not detected, with the exception of breeding bird communities subjected to periodic pulses (e.g. caterpillar outbreaks causing food resource peaks).     

Postglacial history of vegetation,human activity and lake-level changes at Jezioro Linówek in northeast Poland,based on multi-proxy data

We present the postglacial history of vegetation, human activities and changes in lake level in the context of climate change in northeast Poland from ~14,000 cal. b.p. to the present day. The palaeoecological reconstruction is based on the results of high-resolution plant macrofossil analyses as well as records from pollen, Cladocera and radiocarbon dating. Climate fluctuations and human activity have caused many changes in vegetation development in Jezioro Linówek and in the vicinity of this lake. The Early Holocene warming that occurred at ~9500 b.c. caused an increase in Betula and the colonisation of Linówek by Potamogeton lucens, Nymphaea alba and Chara sp. At ~2300 b.c., climate cooling was accompanied by the spread of Picea abies and the appearance of Potamogeton alpinus and Nuphar pumila in the lake. The first traces of farming in the form of Cerealia pollen have been dated back to ~2100 b.c. The cultivation of Triticum began at ~250 b.c., Secale at ~a.d. 550, and Fagopyrum at ~a.d. 1720. The rapid increase in human activity at ~a.d. 1700 and the simultaneous loss of woodland is associated with the establishment of villages in the area and is expressed by the decline of tree curves. In Linówek, which was formed ~14,000 cal. b.p., three periods of high water level occurred (12000–9400, 7000–4000 and 1450 b.c.–a.d. 650), and two periods of low water level (9400–7100 and 3700–1700 b.c.). The changes of water level correspond well with other sites in central and northern Europe.     

Stomatal differentiation and abnormal stomata in hornworts

This light and electron microscope study reveals considerable uniformity in hornwort stomata morphology and density in contrast to common spatial and developmental abnormalities in tracheophytes and mosses. Stomata arise from a median longitudinal division of sporophyte epidermal cells morphologically indistinguishable from their neighbours apart from the retention of a single chloroplast whilst those in the other epidermal cells fragment. Chloroplast division and side-by-side repositioning of the two daughter chloroplasts determines the division plane in the stomatal mother cell. The nascent guard cells contain giant, starch-filled chloroplasts which subsequently divide and, post aperture opening, regain their spherical shape. Accumulation of wall material over the guard cells and of wax rodlets lining the pores follows opening. While the majority of stomata are bilaterally symmetrical those lining the dehiscence furrows display dextral and sinistral asymmetry due to differential expansion of the adjacent epidermal cells.

The ubiquity of open stomata suggests that these never close with the maturational wall changes rendering movement extremely unlikely. These structural limitations, a liquid-filled stage in the ontogeny of the intercellular spaces, and spores already at the tetrad stage when stomata open, suggest that their primary role is facilitating sporophyte desiccation leading to dehiscence and spore dispersal rather than gaseous exchange. Stomata ontogeny and very low densities, like those in Devonian fossils, suggest either ancient origins at a time when atmospheric carbon dioxide levels were much greater than today or a function other than gaseous exchange regulation. We found no evidence for stomatal homology between hornworts, mosses and tracheophytes.