印度木薯花叶病毒DNA在寄主植物中可能存在的形式

从印度木薯花叶病毒（ＩＣＭＶ）侵染的植物中纯化特异的核酸,经ＲＮＡａｓｅ,ＤＮＡａｓｃ,Ｎｕｃｌｅ－ａｓｅＳｌ,ＥｘｏｎｕｃｌｅａｓｅⅢ和ＥｃｏＲＩ酶切,Ｓｏｕｔｈｅｒｎ和Ｄｏｔｂｌｏｔｓ杂交证实,在感病的植株中,存在两种形式的病毒核酸：环状双链ＤＮＡ和环状单链ＤＮＡ,后者可能是病毒ＤＮＡ的（－）链,环状双链ＤＮＡ经限制性内切酶作用可得２．７ｋｂ的线性双链ＤＮＡ纯化的病毒核酸含ＤＮＡ１和ＤＮＡ２两个分子量相近的组份。     

Genomic concatemerization/deletion in rotaviruses: a new mechanism for generating rapid genetic change of potential epidemiological importance.

Three variants of group A rotavirus with large changes in their gene 5 structures have been analyzed at the molecular level. The first of these, P9 delta 5, was obtained during plaque purification undertaken as part of the biological cloning of a field isolate of virus. The gene 5 homolog in this isolate migrated just ahead of the normal segment 6 RNA, giving an estimated size of 1,300 bp. Molecular cloning and sequencing of this homolog revealed it to have a single 308-bp deletion in the center of the normal gene 5 sequence extending between nucleotides 460 and 768 of the normal gene sequence. This deletion caused a frameshift in the gene such that a stop codon was encountered 8 amino acids downstream of the deletion point, giving a predicted size for the protein product of this gene of 150 amino acids compared with the 490 amino acids of its normal-size counterpart. Attempts to detect this shortened protein in virus-infected cells were not successful, indicating that it was much less stable than the full-length protein and/or had suffered a large change in its antigenicity. The second two variants, brvA and brvE, were generated in an earlier study following the high-multiplicity passage of the UKtc strain of bovine rotavirus. Polyacrylamide gel electrophoresis analysis of these nondefective variants showed that brvA had a gene 5 homolog approximately equal in size to the normal RNA segment 2 (approximately 2,700 bp) and that brvE had a size of approximately 2,300 bp. Both variants showed changes in their gene 5 protein products, with brvA mimicking P9 delta 5 in failing to produce a detectable product whereas brvE produced a new virus-specific protein approximately 80 kDa in size. Full-length cDNA clones of the brvE gene 5 homolog were isolated, and analysis of their structure revealed a head-to-tail concatemerization of the normal gene 5 sequence with the first copy of the concatemer covering nucleotides 1 to 808 and the second covering nucleotides 92 to 1579, giving a total length of 2,296 bp. Sequencing across the junction region of the two copies of the gene showed that they were joined in frame to give a predicted combined open reading frame of 728 amino acids with the amino-terminal region consisting of amino acids 1 to 258 fused at the carboxy terminus to amino acids 21 to 490.(ABSTRACT TRUNCATED AT 400 WORDS)     

川西峨眉晚白垩世夹关期河流沉积中的痕迹化石群落*

晚白垩世夹关组中的痕迹化石群落至少由12个痕迹属17个痕迹种组成,其中包括5个新痕迹种,即Cystichrtium cuwatitivum,Steinichnus laryus,Paradidymaulichnus emeiertsis,Monmorphichnus lineates和Rusophycus univalvis.这一化石群落主要是无脊椎动物的进食迹、觅食迹、爬迹、停息迹和居住迹,其中多数呈下浮痕和全浮痕保存,并形成于经常干旱的河流环境(大多出现在泛滥平原沉积中).该群落可识别出两个痕迹化石组合,即1) Scoyenia-Steinichnus-Rusophycus组合,它主要产自泛滥平原和漫滩环境;2)Skolithos-Arenicolites组合,它代表一种水道砂坝或曲流砂坝环境.     

Culture of rotifers with reference to some physico-chemical properties of water in nursery pond

Rotifers were cultured with five different organic and inorganic fertilizers in nursery ponds. Of the fertilizers used, mustard oil cake gave significantly (p < 0.01) higher production of rotifers than that of mohua oil cake followed by cow-dung, wheat bran, mixture of NPK and control. The higher production of rotifers was directly related with the higher doses of fertilizers. Among the rotifer species identified, the abundance of Brachionus caudatus and B. forficula were significantly (p < 0.01) higher than others. Available N, available P, exchangeable K and exchangeable Ca and exchangeable Mg were generally higher in ponds where organic fertilizers were used. Proximate composition of rotifers varied depending on the kinds of fertilizers. The multiple correlations of physico-chemical properties were highly significant (p < 0.01) with the growth and production of B. caudatus (R = 0.995), B. forficula (R = 0.932), Trichocerca capucina (R = 0.917), B. patulus (R = 0.901) and B. angularis (R = 0.892) and simply significant (p < 0.05) in the case of Keratella tropica (R = 0.880), Hexarthra intermadia (R = 0.875), B. calyciflorus (R = 0.864) and Filinia spp. (R = 0.856) contributing 91.20%, 86.86%, 84.09%, 81.18%, 79.57%, 77.44%, 76.56%, 74.65% and 73.27% of total effect of water properties on the growth of these species, respectively. The residual effect of nine different physico-chemical properties of water on the production of rotifers was 78.92% which indicates that these properties of water had only 21.08% influence on the production of rotifers.     

低剂量CO2激光对茄子,青椒叶绿体超微结构影响的初步观察

本试验用功率密度为825mw/cm~2的CO_2激光照射茄子干种子(含水量8.33％)13s、青椒干种子(含水量5.4％)3s,分别以Os为对照(ck)。照射后播于生长箱内,出苗10天分苗于玻璃温室内,于四叶期取样观察成熟叶片叶绿体的超微结构。发现激光照射处理的茄子、青椒的叶绿体的基质片层、基粒片层有明显的吸胀现象。     

用HPLC证实单糖在酸性处理中的变化

<正> 在碱性条件下,醛糖与酮糖之间会发生结构互变。然而美国学者Feather M S等经过十多年的研究,发现在酸性条件下,葡萄糖、甘露糖和果糖之间也有分子内的互变,并应用~3H放射标记等技术,提出了互变的反应机理,这一互变的存在给寡糖及多糖的组份分析带来了一个问题,即用酸性条件水解寡糖或多糖后,如何确定其中的葡萄糖、甘露糖或果糖     

UreB immunodominant epitope-specific CD8+ T-cell responses were beneficial in reducing gastric symptoms in Helicobacter pylori-infected individuals

Background and aims

Although Helicobacter pylori is recognized as an extracellular infection bacterium, it can lead to an increase in the number of CD8⁺ T cells after infection. At present, the characteristics of H. pylori antigen-specific CD8⁺ T cells and the epitope response have not been elucidated. This study was focused on putative protective antigen UreB to detect specific CD8⁺ T-cell responses in vitro and screen for predominant response epitopes.

Methods

The PBMCs collected from H. pylori-infected individuals were stimulated by UreB peptide pools in vitro to identify the immunodominant CD8⁺ T-cell epitopes. Furthermore, their HLA restriction characteristics were detected accordingly by NGS. Finally, the relationship between immunodominant responses and appearance of gastric symptoms after H. pylori infection was conducted.

Results

UreB-specific CD8⁺ T-cell responses were detected in H. pylori-infected individuals. Three of UreB dominant epitopes (A-2 (UreB_443–451: GVKPNMIIK), B-4 (UreB_420–428: SEYVGSVEV), and C-1 (UreB_5–13: SRKEYVSMY)) were firstly identified and mainly presented by HLA-A*1101, HLA-B*4001 and HLA-C*0702 alleles, respectively. C-1 responses were mostly occurred in H. pylori-infected subjects without gastric symptoms and may alleviate the degree of gastric inflammation.

Conclusions

The UreB dominant epitope-specific CD8⁺ T-cell response was closely related to the gastric symptoms after H. pylori infection, and the C-1 (UreB_5-13) dominant peptides may be protective epitopes.     

TaTPP-7A positively feedback regulates grain filling and wheat grain yield through T6P-SnRK1 signalling pathway and sugar–ABA interaction

Grain size and filling are two key determinants of grain thousand-kernel weight (TKW) and crop yield, therefore they have undergone strong selection since cereal was domesticated. Genetic dissection of the two traits will improve yield potential in crops. A quantitative trait locus significantly associated with wheat grain TKW was detected on chromosome 7AS flanked by a simple sequence repeat marker of Wmc17 in Chinese wheat 262 mini-core collection by genome-wide association study. Combined with the bulked segregant RNA-sequencing (BSR-seq) analysis of an F₂ genetic segregation population with extremely different TKW traits, a candidate trehalose-6-phosphate phosphatase gene located at 135.0 Mb (CS V1.0), designated as TaTPP-7A, was identified. This gene was specifically expressed in developing grains and strongly influenced grain filling and size. Overexpression (OE) of TaTPP-7A in wheat enhanced grain TKW and wheat yield greatly. Detailed analysis revealed that OE of TaTPP-7A significantly increased the expression levels of starch synthesis- and senescence-related genes involved in abscisic acid (ABA) and ethylene pathways. Moreover, most of the sucrose metabolism and starch regulation-related genes were potentially regulated by SnRK1. In addition, TaTPP-7A is a crucial domestication- and breeding-targeted gene and it feedback regulates sucrose lysis, flux, and utilization in the grain endosperm mainly through the T6P-SnRK1 pathway and sugar–ABA interaction. Thus, we confirmed the T6P signalling pathway as the central regulatory system for sucrose allocation and source–sink interactions in wheat grains and propose that the trehalose pathway components have great potential to increase yields in cereal crops.     

旌节花科植物上的二个小煤炱科新种

本文报道了寄生在旌节花科植物上的二个小煤炱科新种。它们是(1)旌节花附丝壳(Appendiculella stachyuri Y.X.Hu et B.Song sp.nov.);(2)旌节花小光壳炱(Asteridie-lla stachyuri Y.S.Ouyang et B.Song sp.nov.)。旌节花科分布于东亚,是小煤炱菌寄主的世界新记录。新种有拉丁文和汉文描述。模式标本存放在广东省微生物研究所(GDIM)。