Isolation of 80S ribosomes from spores of Aspergillus fumigatus and their antigenicity in rabbits

Ribosomes were obtained from spores of Aspergillus fumigatus by mechanical disruption and differential centrifugation. The initial preparation (crude ribosomes) contained spore components which appeared to be broken fragments of plasmalemma with or without organelles. Purified ribosomes free of membranous material were prepared by gel filtration chromatography on Sepharose CL-4B. Monomeric 80S ribosomes consisting of 40% protein and 60% RNA, and morphologically characteristic of fungal ribosomes were isolated.Serological reactions in sera from rabbits injected with crude or purified ribosomes were similar indicating that the purification process did not change or eliminate antigens that stimulated antibody detectable either by indirect hemagglutination (IHA) or in gel precipitin tests.     

Shrub expansion in the Arctic may induce large‐scale carbon losses due to changes in plant‐soil interactions

Background

Tall deciduous shrubs are increasing in range, size and cover across much of the Arctic, a process commonly assumed to increase carbon (C) storage. Major advances in remote sensing have increased our ability to monitor changes aboveground, improving quantification and understanding of arctic greening. However, the vast majority of C in the Arctic is stored in soils, where changes are more uncertain.

Scope

We present pilot data to argue that shrub expansion will cause changes in rhizosphere processes, including the development of new mycorrhizal associations that have the potential to promote soil C losses that substantially exceed C gains in plant biomass. However, current observations are limited in their spatial extent, and mechanistic understanding is still developing. Extending measurements across different regions and tundra types would greatly increase our ability to predict the biogeochemical consequences of arctic vegetation change, and we present a simple method that would allow such data to be collected.

Conclusions

Shrub expansion in the Arctic could promote substantial soil C losses that are unlikely to be offset by increases in plant biomass. However, confidence in this prediction is limited by a lack of information on how soil C stocks vary between contrasting Arctic vegetation communities; this needs to be addressed urgently.

     

Residual stress and osmotic swelling of the periodontal ligament

Biomechanics and Modeling in Mechanobiology - Osmotic swelling and residual stress are increasingly recognized as important factors in soft tissue biomechanics. Little attention has been given to...     

The infundibular balance organ in amphioxus larvae and related aspects of cerebral vesicle organization

Serial EM reconstructions were used to examine the organization and constituent cell types of the infundibular region of the cerebral vesicle (c.v.) in a 12.5-day larva of Branchiostoma floridae . The balance organ lies just in front of the infundibular cells and consists of 10 electron-dense cells with long, bulbous cilia, each surrounded by a ring of accessory cells. The ciliary bulb cells have axons that terminate in vesicle-filled swellings that lack identifiable synapses. The accessory cells have short basal processes that are minor contributors to the adjacent neuropile. Based on morphology, we suggest a mechanosensory function for the ciliary bulb cells, possibly related to balance or motion detection. Scattered cells of similar type are found elsewhere in the cerebral vesicle, along with a variety of other neurones with caudally projecting axons and varicosities, but few synapses. Instead, nonsynaptic, paracrine secretion appears to be the predominant mode of transmitter release in the neuropile and ventral tracts of the cerebral vesicle. The closest vertebrate homologue of this part of the amphioxus brain is arguably the limbic core of the caudal diencephalon and mesencephalon, including the homeostatic control centres of the hypothalamus. We postulate that this limbic core is an ancient structure traceable at least as far back in evolution as the common ancestor of amphioxus and vertebrates.     

Bile acid interactions with rabbit ileal lipid binding protein and an engineered helixless variant reveal novel ligand binding properties of a versatile beta-clam shell protein scaffold

The intracellular ileal lipid binding proteins (ILBPs) are involved in the transport and enterohepatic circulation of bile acids. ILBPs from different species show high sequence and structural homology and have been shown to bind multiple bile acid ligands with differing degrees of selectivity and positive co-operativity. Human ILBP binds bile acid derivatives in a well-characterised 2:1 ligand:protein complex, however, we show that the highly homologous rabbit ILBP (82% sequence identity) with seven conservative substitutions preferentially binds multiple conjugated deoxycholate ligands in a novel 3:1 binding mode essentially within the same beta-clam shell structure. We have extended these studies to investigate the role of the alpha-helical capping motif (residues 9-35) in controlling the dimensions of the binding cavity and ligand uptake. Substituting the alpha-helical motif (residues 9-35) with a short Gly-Gly-Ser-Gly linker dramatically affects the protein stability such that under physiological conditions the mutant (Deltaalpha-ILBP) is highly disordered. However, we show that the inability of the mutant to adopt a stable three-dimensional structure under these conditions is no barrier to binding ligands with near-native affinity. These structural modifications not only demonstrate the possibility of strong coupling between ligand binding and protein folding, but result in changes in bile acid selectivity and binding stoichiometry, which we characterise in detail using isothermal calorimetry and mass spectrometry.