Ticks (Acari: Ixodidae) of the state of Amazonas,Brazil

The tick fauna of Brazil is currently composed by 72 species. The state of Amazonas is the largest of Brazil, with an area of ≈ 19% of the Brazilian land. Besides its vast geographic area, only 19 tick species have been reported for Amazonas. Herein, lots containing ticks from the state of Amazonas were examined in three major tick collections from Brazil. A total of 5933 tick specimens were examined and recorded, comprising 2693 males, 1247 females, 1509 nymphs, and 484 larvae. These ticks were identified into the following 22 species: Amblyomma cajennense sensu lato, Amblyomma calcaratum, Amblyomma coelebs, Amblyomma dissimile, Amblyomma dubitatum, Amblyomma geayi, Amblyomma goeldii, Amblyomma humerale, Amblyomma latepunctatun, Amblyomma longirostre, Amblyomma naponense, Amblyomma oblongoguttatum, Amblyomma ovale, Amblyomma rotundatum, Amblyomma scalpturatum, Amblyomma varium, Dermacentor nitens, Haemaphysalis juxtakochi, Ixodes cf. Ixodes fuscipes, Ixodes luciae, Rhipicephalus microplus, Rhipicephalus sanguineus sensu lato. Ticks were collected from 17 (27.4%) out of the 62 municipalities that currently compose the state of Amazonas. The following four species are reported for the first time in the state of Amazonas: A. coelebs, A. dubitatum, H. juxtakochi, and Ixodes cf. I. fuscipes. The only tick species previously reported for Amazonas and not found in the present study is Amblyomma parvum. This study provides a great expansion of geographical and host records of ticks for the state of Amazonas, which is now considered to have a tick fauna composed by 23 species. It is noteworthy that we report 1391 Amblyomma nymphs that were identified to 13 different species.     

Marine sponges (Porifera) from the Bahía San Antonio (North Patagonian Gulfs,Argentina), with additions to the phylogeography of the widely distributed Cliona aff. celata and Hymeniacidon perlevis,and the description of two new species

Six sponge species from Bahía San Antonio (north Argentinean Patagonia) are (re)described, including two new species, namely Halichondria (Halichondria) elenae sp. nov. and Clathria (Microciona) saoensis sp. nov., and three new records for the Argentinean coast. Halichondria (H.) elenae sp. nov. is the only yellowish-greenish SW Atlantic Halichondria with oxeas up to 450?µm. The new species’ 18S rRNA blasted with Halichondria bowerbanki from Ireland, but it is argued that co-specificity is unlikely, in view of their rather distinct morphologies. Clathria (M.) saoensis sp. nov. is the only C. (Microciona) in the SW Atlantic, SE Pacific, and (sub)Antarctic regions with smooth (or nearly so) principal megascleres, mostly below 500?µm long, as well as moderately curved toxas, and isochelae of regular non-cleistochelate shape. Cliona aff. celata and Hymeniacidon perlevis had their identifications confirmed by the sequencing of their 28S and 18S rRNA genes, respectively, and mitochondrial CO1. Both of them clustered with previously sequenced specimens from the Temperate North Atlantic, apart from additional samples from SE Brazil, in the case of C. aff. celata, and China and South Korea, in the case of H. perlevis.     

Periphyton nutrient content,biomass and algal community on artificial substrate: response to experimental nutrient enrichment and the effect of its interruption in a tropical reservoir

Periphyton plays an important functional role in the retention of nutrients in aquatic ecosystems, especially phosphorus. We evaluated the effects of enrichment with N and P and the effect after 20 days of no additional N and P on periphyton on artificial substratum in open-bottom mesocosms. The aim was to jointly evaluate periphyton, phytoplankton and zooplankton in the presence of macrophytes. Experimental conditions simulated natural conditions and nutrient addition was based on the maximum concentration recorded in mesotrophic reservoir. Our hypothesis is that the periphyton is sensitive to the effects of N and P enrichment and its interruption, despite the positive response of phytoplankton and zooplankton. Two treatments were designed using open-bottom mesocosms (n = 3): control (no nutrient addition); NP+ (combined phosphorus and nitrogen addition). Sampling for the measurement of biotic and abiotic variables was performed, with 10 days of continuous enrichment, on the 3rd, 6th and 11th, and 20 days after enrichment had ended (31st day). Periphyton chlorophyll a, dry mass and algal density increased significantly with the addition of N and P and decreased 20 days after the interruption of the enrichment. The highest periphyton P content was found in the NP+ treatment. The enrichment had a positive effect on Chrysophyceae (Chromulina spp.) and rotifer (Polyarthra spp.) density and the interruption of enrichment favored Bacillariophyceae (Gomphonema sp.) and rotifers (Gastropus stylifer). Phytoplankton responded positively to enrichment. Along with the high macrophyte coverage over the experimental period, we evidenced the positive effect enrichment had on phytoplankton biomass and zooplankton abundance. Therefore, periphyton on artificial substrate was sensitive to effects of N and P enrichment and its interruption, responding promptly to changes in nutrient availability in a scenario of high competition and grazing.     

Expansion and diversification of the gibberellin receptor GIBBERELLIN INSENSITIVE DWARF1 (GID1) family in land plants

Key message

Here we uncover the major evolutionary events shaping the evolution of the GID1 family of gibberellin receptors in land plants at the sequence, structure and gene expression levels.

Abstract

Gibberellic acid (gibberellin, GA) controls key developmental processes in the life cycle of land plants. By interacting with the GIBBERELLIN INSENSITIVE DWARF1 (GID1) receptor, GA regulates the expression of a wide range of genes through different pathways. Here we report the systematic identification and classification of GID1s in 54 plants genomes, encompassing from bryophytes and lycophytes, to several monocots and eudicots. We investigated the evolutionary relationship of GID1s using a comparative genomics framework and found strong support for a previously proposed phylogenetic classification of this family in land plants. We identified lineage-specific expansions of particular subfamilies (i.e. GID1ac and GID1b) in different eudicot lineages (e.g. GID1b in legumes). Further, we found both, shared and divergent structural features between GID1ac and GID1b subgroups in eudicots that provide mechanistic insights on their functions. Gene expression data from several species show that at least one GID1 gene is expressed in every sampled tissue, with a strong bias of GID1b expression towards underground tissues and dry legume seeds (which typically have low GA levels). Taken together, our results indicate that GID1ac retained canonical GA signaling roles, whereas GID1b specialized in conditions of low GA concentrations. We propose that this functional specialization occurred initially at the gene expression level and was later fine-tuned by mutations that conferred greater GA affinity to GID1b, including a Phe residue in the GA-binding pocket. Finally, we discuss the importance of our findings to understand the diversification of GA perception mechanisms in land plants.

     

Evaluating the role of morphological characters in the phylogeny of some trypanosomatid genera (Excavata,Kinetoplastea, Trypanosomatida)

Over the last three decades, it has been progressively assumed that morphology has become obsolete for trypanosomatid systematics. Traditional taxonomy, based on the occurrence of specific kinds of cell morphotypes during life cycles and the morphometry of such cells, is often rejected by molecular phylogenies inferred mostly from 18S rDNA alone or combined with GAPDH. In such context, we hypothesized the affinities of 35 representatives of seven trypanosomatid genera from separated and combined cladistics analyses of morphological and 18S matrices. Morphology is shown to be more consistent and to have stronger synapomorphy retention than the 18S data. The strict consensus of cladograms from separated analyses was mostly unresolved, while combined analysis produced a meaningful and robust phylogenetic pattern, as evidenced by partition congruence index, Bremer support and frequencies of groups present/contradicted. The results (1) corroborate the separation of Angomonas and Strigomonas from Crithidia, which is now shown to be monophyletic, (2) support the revalidation of the genus Wallaceina, and (3) place the genera Herpetomonas, Leptomonas and Phytomonas within a single clade. Overall, we demonstrate the belief that morphological characters are inferior to molecular ones for trypanosomatid systematics is a consequence of neglecting their inclusion in phylogenetic analyses.     

Phlebotomine fauna (Diptera,Psychodidae) in Rio Preto State Park,Southern Espinhaço Range,Minas Gerais,Brazil

A study of the phlebotomine sand fly fauna was carried out in the Rio Preto State Park (Minas Gerais, Brazil) aiming to associate the presence of vector species with the risk of leishmaniasis transmission in that region. Sand flies were captured using HP light traps for four months from January to October 2013. The traps were exposed continuously for 40 h each month, in nine fixed sites. A total of 3129 sand flies were captured, belonging to 19 species. Lutzomyia evandroi (Costa Lima & Antunes 1936) was the predominant species (76.48%). The distribution of the phlebotomine sand flies and climatic factors (temperature, humidity, and rainfall) was evaluated. The summer was the season with higher occurrence of insects captured (82.4%). The presence of cutaneous and visceral vector species in park areas requires attention and regular monitoring of sand fly fauna in this conservation area to ensure the well-being of visitors and the regional ecotourism.     

Effect of flood pulses on the trophic ecology of four piscivorous fishes from the eastern Amazon

This study investigated the effect of hydrological periods on the feeding activity and trophic interactions of four piscivorous fishes from the middle Xingu River, Brazil: pike‐characid Boulengerella cuvieri, dogtooth characin Hydrolycus armatus, dogtooth characin Hydrolycus tatauaia and South American silver croaker Plagioscion squamosissimus. Repletion Index (I_R%), Alimentary Index (I_Ai%) and food web properties were calculated for each species. A total of 825 specimens were collected. The I_R showed changes in feeding intensity of B. cuvieri, H. armatus and H. tatauaia among hydrological periods. Flood pulse showed no influence on composition and importance of food items consumed. Trophic connections showed that connectivity ranged from 0.025 to 0.038. The highest number of trophic connections (75) occurred in the high‐water period, when 51 food items were recorded and the lowest number of trophic connections (43) occurred in receding water, with 31 food items. In all food webs, over 45% of food items were consumed by only one species (ultra‐peripheral items), which is common in piscivorous fishes.     

Growth rate correlates negatively with protein turnover in Arabidopsis accessions

Previous studies with Arabidopsis accessions revealed that biomass correlates negatively to dusk starch content and total protein, and positively to the maximum activities of enzymes in photosynthesis. We hypothesized that large accessions have lower ribosome abundance and lower rates of protein synthesis, and that this is compensated by lower rates of protein degradation. This would increase growth efficiency and allow more investment in photosynthetic machinery. We analysed ribosome abundance and polysome loading in 19 accessions, modelled the rates of protein synthesis and compared them with the observed rate of growth. Large accessions contained less ribosomes than small accessions, due mainly to cytosolic ribosome abundance falling at night in large accessions. The modelled rates of protein synthesis resembled those required for growth in large accessions, but were up to 30% in excess in small accessions. We then employed ¹³CO₂ pulse‐chase labelling to measure the rates of protein synthesis and degradation in 13 accessions. Small accessions had a slightly higher rate of protein synthesis and much higher rates of protein degradation than large accessions. Protein turnover was negligible in large accessions but equivalent to up to 30% of synthesised protein day^?1 in small accessions. We discuss to what extent the decrease in growth in small accessions can be quantitatively explained by known costs of protein turnover and what factors may lead to the altered diurnal dynamics and increase of ribosome abundance in small accessions, and propose that there is a trade‐off between protein turnover and maximisation of growth rate.