Microvascular Ultrastructure after Perfusion Fixation and Injection of an Electron Dense Medium

Injection of a silicon rubber compound has been used to demonstrate the microvascular architecture of various tissues and organs (Reynolds 1968, Cortel 1969, Beeuwkes 1971, Beeuwkes and Bonventre 1975, Plyley and Groom 1975).     

Cell wall organic matrix composition and biomineralization across reef-building coralline algae under global change

Crustose coralline algae (CCA) are one of the most important benthic substrate consolidators on coral reefs through their ability to deposit calcium carbonate on an organic matrix in their cell walls. Discrete polysaccharides have been recognized for their role in biomineralization, yet little is known about the carbohydrate composition of organic matrices across CCA taxa and whether they have the capacity to modulate their organic matrix constituents amidst environmental change, particularly the threats of ocean acidification (OA) and warming. We simulated elevated pCO₂ and temperature (IPCC RCP 8.5) and subjected four mid-shelf Great Barrier Reef species of CCA to 2 months of experimentation. To assess the variability in surficial monosaccharide composition and biomineralization across species and treatments, we determined the monosaccharide composition of the polysaccharides present in the cell walls of surficial algal tissue and quantified calcification. Our results revealed dissimilarity among species' monosaccharide constituents, which suggests that organic matrices are composed of different polysaccharides across CCA taxa. We also observed that species differentially modulate composition in response to ocean acidification and warming. Our findings suggest that both variability in composition and ability to modulate monosaccharide abundance may play a crucial role in surficial biomineralization dynamics under the stress of OA and global warming.     

Effects of carbon dioxide sequestration on California margin deep-sea foraminiferal assemblages

Deep-sea sequestration of CO₂ is being considered as a possible mitigation tool to decrease atmospheric CO₂ concentrations and its associated negative effects. This study investigated potential effects of liquid carbon dioxide (CO₂) injection on deep-sea foraminiferal assemblages. Foraminifera are ideal for this ecological impact investigation because of differing test composition (calcareous and non-calcareous) and thickness, and diverse epifaunal and infaunal depth preferences. The experiment was conducted on August–September 2003, at 3600 m off the coast of Monterey Bay, California, aboard the R/V Western Flyer using the ROV Tiburon. The pH of the site was monitored throughout the experiment. Sediment push-cores were collected (both from the experimental and control sites) and stained to distinguish live (stained) from dead (unstained) individuals. Effects of CO₂ injection on assemblages have been tracked both vertically (to 10 cm depth below sea floor) and horizontally (up to 10 m from CO₂ injection sites), as well as between live and dead individuals. Within corrals (containing the injected CO₂) and their underlying sediments, severe pH changes (near 4.0 units) were recorded. This compares with a record of small average reductions in ocean pH (− 0.05 units) combined with large episodic excursions (− 1.7 units) over the experimental area due to the injection of CO₂. Exposure to this gradient of low pH caused increased mortality and dissolution of calcareous forms within corrals, as far as 5 m from the injection site, and to at least 10 cm depth in the sediments.This experiment revealed several major effects of CO₂ injection on foraminiferal assemblages in surficial sediments: 1) total number of foraminifera in a sample decreases; 2) foraminiferal species richness decreases in both stained and unstained specimens; and 3) relative percentage of stained (live) forms in the remaining tests increases. Down-core trends (to 10 cm below sea floor) have revealed: 1) percent agglutinated forms decline and calcareous forms increase with depth; 2) agglutinated species richness decreases with depth; and 3) experimental core assemblages become increasingly similar with depth to those in control cores not subjected to CO₂ injection. These results imply almost complete initial mortality and dissolution in the upper 10 cm throughout the corrals following liquid CO₂ injection. Since calcareous foraminifera represent more than 50% of the total assemblages, this clearly indicates that emplacement of CO₂ will result in negative effects to diversity and survivorship of the deep-sea benthic meiofauna.     

Trait-based approaches reveal fungal adaptations to nutrient-limiting conditions

The dependency of microbial activity on nutrient availability in soil is only partly understood, but highly relevant for nutrient cycling dynamics. In order to achieve more insight on microbial adaptations to nutrient limiting conditions, precise physiological knowledge is needed. Therefore, we developed an experimental system assessing traits of 16 saprobic fungal isolates in nitrogen (N) limited conditions. We tested the hypotheses that (1) fungal traits are negatively affected by N deficiency to a similar extent and (2) fungal isolates respond in a phylogenetically conserved fashion. Indeed, mycelial density, spore production and fungal activity (respiration and enzymatic activity) responded similarly to limiting conditions by an overall linear decrease. By contrast, mycelial extension and hyphal elongation peaked at lowest N supply (C:N 200), causing maximal biomass production at intermediate N contents. Optimal N supply rates differed among isolates, but only the extent of growth reduction was phylogenetically conserved. In conclusion, growth responses appeared as a switch from explorative growth in low nutrient conditions to exploitative growth in nutrient-rich patches, as also supported by responses to phosphorus and carbon limitations. This detailed trait-based pattern will not only improve fungal growth models, but also may facilitate interpretations of microbial responses observed in field studies.