TSG101 promotes the proliferation,migration and invasion of hepatocellular carcinoma cells by regulating the PEG10

The tumour susceptibility gene 101 (TSG101) is reported to play important roles in the development and progression of several human cancers. However, its potential roles and underlined mechanisms in human hepatocellular carcinoma (HCC) are still needed to be further clarified. In the present study, we reported that knock down of TSG101 suppressed the proliferation, migration and invasion of HCC cells, while overexpression of TSG101 facilitated them. Molecularly, the results revealed that knock down of TSG101 significantly decreased the cell cycle related regulatory factor p53 and p21. In another point, knock down of TSG101 also obviously decreased the level of metallopeptidase inhibitor TIMP1 (Tissue inhibitors of metalloproteinases 1), which results in inhibition of MMP2, MMP7 and MMP9. In contrast, overexpression of TSG101 had opposite effects. The iTRAQ proteomics analysis identified that oncogenic protein PEG10 (Paternally expressed gene 10) might be a potential downstream target of TSG101. Further investigation showed that TSG101 interacted with PEG10 and protected it from proteasomal degradation thereby regulating the expression of p53, p21 and MMPs. Finally, we found that both TSG101 and PEG10 proteins are up‐regulated and presented a direct correlation in HCC patients. In conclusion, these results suggest that TSG101 is up‐regulated in human HCC patients, which may accelerate the proliferation, migration and invasion of HCC cells through regulating PEG10.     

好氧-厌氧混合污泥启动微生物燃料电池产电性能及微生物群落动态特征

【目的】为探讨好氧-厌氧混合污泥启动微生物燃料电池(Microbial fuel cell,MFC)产电性能以及MFC对微生物群落的选择作用,【方法】以乳酸为底物,应用不依赖于培养的微生物分子生物学技术解析单室MFC启动过程中微生物群落的组成和结构动态学特征。【结果】结果表明,MFC经过3个周期启动成功,最高输出电压230 m V。当MFC外电阻为1656Ω时,最大功率密度11.15 W/m3,电池运行稳定。混合污泥启动MFC以后,阳极生物膜微生物群落结构同种泥差异较大,且多样性降低。生物膜中微生物类群按丰度依次为β-变形菌纲(Betaproteobacteria)24.90%、拟杆菌门(Bacteroidetes)21.30%、厚壁菌门(Firmicutes)9.70%、γ-变形菌纲(Gammaproteobacteria)8.50%、δ-变形菌纲(Deltaproteobacteria)7.90%、绿弯菌门(Chloroflexi)4.20%以及α-变形菌纲(Alphaproteobacteria)3.60%。有利于生物膜形成与稳定的动胶菌属(Zoogloea)和不动杆菌属(Acinetobacter)序列丰度分别占生物膜群落的5.00%和3.90%,与MFC产电能力直接相关的地杆菌属(Geobacter)序列由混合污泥中的0.60%上升至阳极生物膜中的2.60%。【结论】本研究表明,MFC阳极生物膜在驯化过程中对污泥中的微生物进行淘汰和选择,最终驯化形成了有利于生物膜形成与稳定、有机物厌氧发酵与产电的微生物菌群。     

Development of thermodynamic optimum searching (TOS) to improve the prediction accuracy of flux balance analysis

Flux balance analysis (FBA) has been widely used in calculating steady‐state flux distributions that provide important information for metabolic engineering. Several thermodynamics‐based methods, for example, quantitative assignment of reaction directionality and energy balance analysis have been developed to improve the prediction accuracy of FBA. However, these methods can only generate a thermodynamically feasible range, rather than the most thermodynamically favorable solution. We therefore developed a novel optimization method termed as thermodynamic optimum searching (TOS) to calculate the thermodynamically optimal solution, based on the second law of thermodynamics, the minimum magnitude of the Gibbs free energy change and the maximum entropy production principle (MEPP). Then, TOS was applied to five physiological conditions of Escherichia coli to evaluate its effectiveness. The resulting prediction accuracy was found significantly improved (10.7–48.5%) by comparing with the ¹³C‐fluxome data, indicating that TOS can be considered an advanced calculation and prediction tool in metabolic engineering. Biotechnol. Bioeng. 2013; 110: 914–923. © 2012 Wiley Periodicals, Inc.     

Expression of baculovirus anti-apoptotic genes p35 and op-iap in cotton (Gossypium hirsutum L.) enhances tolerance to verticillium wilt

Background

Programmed cell death plays an important role in mediating plant adaptive responses to the environment such as the invasion of pathogens. Verticillium wilt, caused by the necrotrophic pathogen Verticillium dahliae, is a serious vascular disease responsible for great economic losses to cotton, but the molecular mechanisms of verticillium disease and effective, safe methods of resistance to verticillium wilt remain unexplored.

Methodology/Principal Findings

In this study, we introduced baculovirus apoptosis inhibitor genes p35 and op-iap into the genome of cotton via Agrobacterium-mediated transformation and analyzed the response of transgenic plants to verticillium wilt. Results showed that p35 and op-iap constructs were stably integrated into the cotton genome, expressed in the transgenic lines, and inherited through the T₃ generation. The transgenic lines had significantly increased tolerance to verticillium wilt throughout the developmental stages. The disease index of T₁–T₃ generation was lower than 19, significantly (P<0.05) better than the negative control line z99668. After treatment with 250 mg/L VD-toxins for 36 hours, DNA from negative control leaves was fragmented, whereas fragmentation in the transgenic leaf DNA did not occur. The percentage of cell death in transgenic lines increased by 7.11% after 60 mg/L VD-toxin treatment, which was less than that of the negative control lines''s 21.27%. This indicates that p35 and op-iap gene expression partially protects cells from VD-toxin induced programmed cell death (PCD).

Conclusion/Significance

Verticillium dahliae can trigger plant cells to die through induction of a PCD mechanism involved in pathogenesis. This paper provides a potential strategy for engineering broad-spectrum necrotrophic disease resistance in plants.     

中国顶丝藻科（Acrochaetiaceae）新记录I

中国顶丝藻科新记录６种。密集旋体藻Ａｕｄｏｕｉｎｅｌｌｅｄｅｎｓａ,亮管旋体藻Ａ．ｈｙａｌｏｓｉｐｈｏｎｉａｅ,小旋体藻Ａ．ｐａｒｖｕｌａ,羽状旋体藻Ａ．ｐｌｕｍｏｓａ,顶生旋体藻Ａ．ｔｅｒｍｉｎａｌｉｓ,图氏旋体藻Ａ．ｔｈｕｒｅｔｉｉ。     

二性霉素B与β-escin混合穿孔电极液在人心房肌细胞SK2电流记录中的应用

目的:为研究钙离子对人心房肌细胞小电导钙激活钾通道电流(ISK2)的调节作用,建立用二性霉素B(amphotericin B)与β-escin穿孔的膜片钳(PPR)技术。方法:体外循环术中取得右心耳,应用急性酶分离获得单个人体心房肌细胞,用二性霉素B和/或β-escin作为穿孔电极液,进行穿孔膜片钳实验,在此模式下测试钙离子对人心房肌细胞SK2电流的调控作用,并用胞内钙测试系统验证穿孔前后胞内钙变化。结果:混合使用穿孔电极液6.88μg/mlβ-escin和150μg/ml二性霉素B与单独用150μg/ml二性霉素B或6.88μg/mlβ-escin相比,前一种方法细胞容易封接,能形成稳定的穿孔膜片钳记录模式,可观察到SK2电流有激活,且胞内钙测试系统检测时可观察到穿孔后电极液至细胞内的游离钙离子浓度的增加,F340/380增强。结论:适当浓度的二性霉素B与β-escin混合使用进行穿孔膜片钳实验是一种稳定的全细胞膜片的记录技术,可以用于胞内游离钙离子对SK2电流调控的研究。     

杂交稻特殊配合力与杂种优势、亲本间遗传距离的相 关性

杂交水稻育种的实质是配合力育种, 筛选高特殊配合力的杂交水稻组合才能选育出在生产上有实用价值的强优势组合。文章利用SSR标记检测了9个三系杂交稻亲本(5个不育系和4个恢复系)之间的遗传距离, 结合20个杂交稻组合(5×4 NCII)的产量表现, 分析了杂交水稻特殊配合力(Special combining ability, SCA)效应与产量杂种优势、亲本间遗传距离的相关性。结果表明, 特殊配合力效应与对照优势(相关系数r₁=0.5609)、平均优势(相关系数_r2=0.541)之间均呈显著正相关, 而与亲本遗传距离之间相关不显著, 相关系数(r=0.2143)较小。说明本研究所配组合的特殊配合力效应能充分反映杂种优势, 选用的杂交亲本能组配出强优势组合; 而杂交亲本遗传距离的大小并不能反映特殊配合力效应, 分子标记遗传距离与特殊配合力的相关性还有待于进一步的探讨。     

漆酶及其应用

结合当今该领域的最新研究进展,综述了漆酶来源、结构、作用机制、介体系统及其在水相和非水相中的应用,以期为漆酶催化性能的进一步研究提供一定的借鉴和参考.     

香溪河河流连续统特征研究

以香溪河附石藻类密度、藻类叶绿素a浓度、Shannon-Wiener多样性指数及生态系统初级生产力随河流级别的变化为例探索该河流的连续统特征。结果表明,附石藻类密度、藻类叶绿素a浓度和Shannon-Wiener多样性指数总体上都有随着河流级别增加而增加的趋势,但在1～3级河段之间这种趋势并不明显,甚至出现了逆转。河流初级生产力也有随河流级别增加而增加的趋势,并在第4级河流达到最大,随后有所下降。在全水系范围内河流初级生产力(P)与群落呼吸(R)比值P／R均大于1,说明香溪河是一条以自养生产为主的河流。所研究的特征并不完全与连续统概念的预测相一致,表明河流已经受到了一定程度的人为干扰。     

裸盖菇和斑褶菇属真菌菌种的有效分离方法

【目的】探讨获取裸盖菇属及斑褶菇属真菌纯培养的有效分离方法。【方法】采用菌褶接种法和孢子弹射法进行分离,以形态鉴定为基础,通过ITS区测序并与DNA序列库中已知序列进行比对的分子鉴定方法鉴别分离培养物的真伪,以确定分离方法的可靠性。【结果】对采自云南的28个裸盖菇属和斑褶菇属菌株进行了分离,菌褶接种法有24个菌株分离纯化成功,成功率达86%,而孢子弹射法仅有7个菌株分离成功,成功率为25%。【结论】菌褶接种法对于裸盖菇属和斑褶菇属真菌是一种有效而简便易行的分离方法,该法利用菌褶为产孢组织的优势,无需对菌褶进行表面消毒,易于纯化成功,值得在其他类似的腐生小型薄盖伞菌类群的分离中尝试应用。