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871.
Yubuki N Céza V Cepicka I Yabuki A Inagaki Y Nakayama T Inouye I Leander BS 《The Journal of eukaryotic microbiology》2010,57(6):554-561
Ultrastructural and molecular phylogenetic evidence indicate that the Parabasalia consists of seven main subgroups: the Trichomonadida, Honigbergiellida, Hypotrichomonadida, Tritrichomonadida, Cristamonadida, Spirotrichonymphida, and Trichonymphida. Only five species of free-living parabasalids are known: Monotrichomonas carabina, Ditrichomonas honigbergii, Honigbergiella sp., Tetratrichomonas undula, and Pseudotrichomonas keilini. Phylogenetic analyses show that free-living species do not form a clade and instead branch in several different positions within the context of their parasitic relatives. Because the diversity of free-living parabasalids is poorly understood, the systematics of these lineages is in a significant state of disarray. In order to better understand the phylogenetic distribution of free-living parabasalids, we sequenced the small subunit rDNA from three different strains reminiscent of P. keilini; the strains were isolated from different geographical locations: (1) mangrove sediments in Japan and (2) sediments in Cyprus. These data demonstrated that the free-living parabasalids P. keilini and Lacusteria cypriaca n. g., n. sp., form a paraphyletic assemblage near the origin of a clade consisting mostly of parasitic trichomonadids (e.g. Trichomonas vaginalis). This paraphyletic distribution of similar morphotypes indicates that free-living trichomonadids represent a compelling example of morphostasis that provides insight into the suite of features present in the most recent free-living ancestor of their parasitic relatives. 相似文献
872.
Suzuki A Kobayashi M Matsuda K Matsumoto T Kawakubo M Kumazawa S Koide N Miyagawa S Ota H 《Helicobacter》2010,15(6):538-548
873.
Eriko Nishimura Emi Suzaki Mami Irie Hisae Nagashima Tadaki Hirose 《Ecological Research》2010,25(2):383-393
Light climates strongly influence plant architecture and mass allocation. Using the metamer concept, we quantitatively described
branching architecture and growth of Chenopodium album plants grown solitarily or in a dense stand. Metamer is a unit of plant construction that is composed of an internode and
the upper node with a leaf and a subtended axillary bud. The number of metamers on the main-axis stem increased with plant
growth, but did not differ between solitary and dense-stand plants. Solitary plants had shorter thicker internodes with branches
larger in size and number than the plant in the dense stand. Leaf area on the main stem was not different. Larger leaf area
in solitary plants was due to a larger number of leaves on branches. Leaf mass per area (LMA) was higher in solitary plants.
It did not significantly differ between the main axis and branches in solitary plants, whereas in the dense stand it was smaller
on branches. Dry mass was allocated most to leaves in solitary plants and to stems in the dense stand in vegetative growth.
Reproductive allocation was not significantly different. Branch/main stem mass ratio was higher in solitary than dense-stand
plants, and leaf/stem mass ratio higher in branches than in the main axis. Nitrogen use efficiency (NUE) (dry mass growth
per unit N uptake) was higher and light use efficiency (LUE) (dry mass growth per unit light interception) was lower in the
plant grown solitarily than in the dense stand. 相似文献
874.
875.
Gotoh T Ono H Kikuchi K Nirasawa S Takahashi S 《Bioscience, biotechnology, and biochemistry》2010,74(10):2154-2157
An aspartic protease that is significantly produced by baculovirus-infected Spodoptera frugiperda Sf9 insect cells was purified to homogeneity from a growth medium. To monitor aspartic protease activity, an internally quenched fluoresce (IQF) substrate specific to cathepsin D was used. The purified aspartic protease showed a single protein band on SDS-PAGE with an apparent molecular mass of 40 kDa. The N-terminal amino acid sequence of the enzyme had a high homology to a Bombyx mori aspartic protease. The enzyme showed greatest affinity for the IQF substrate at pH 3.0 with a K(m) of 0.85 μM. The k(cat) and k(cat)/K(m) values were 13 s(-1) and 15 s(-1) μM(-1) respectively. Pepstatin A proved to be a potent competitive inhibitor with inhibitor constant, K(i), of 25 pM. 相似文献
876.
Masayuki Oda Minoru Saito Takeshi Tsumuraya Ikuo Fujii 《Journal of molecular recognition : JMR》2010,23(3):263-270
We analyzed the binding of the 7C8 antibody to the chloramphenicol phosphonate antigens—one containing a trifluoroacetyl group (CP‐F) and the other containing an acetyl group (CP‐H)—by using isothermal titration calorimetry (ITC). The thermodynamic difference due to the substitution of F by H was evaluated using free energy calculations based on molecular dynamics (MD) simulations. We have previously shown that another antibody, namely, 6D9, binds more weakly to CP‐H than to CP‐F, mainly due to the different hydration free energies of the dissociated state and not due to the unfavorable hydrophobic interactions with the antibody in the bound state. Unlike in the binding of the trifluoroacetyl group with 6D9, in its binding with 7C8, it is exposed to the solvent, as seen in the crystal structure of the complex of 7C8 with CP‐F. The thermodynamic analysis performed in this study showed that the binding affinity of 7C8 for CP‐H is similar to that for CP‐F, but this binding to CP‐H is accompanied with less favorable enthalpy and more favorable entropy changes. The free energy calculations indicated that, upon the substitution of F by H, enthalpy and entropy changes in the associated and dissociated states were decreased, but the magnitude of enthalpy and entropy changes in the dissociated state was larger than that in the associated state. The differences in binding free energy, enthalpy, and entropy changes determined by the free energy calculations for the substitution of F by H are in good agreement with the experimental results. Copyright © 2009 John Wiley & Sons, Ltd. 相似文献
877.
Takashi L. Shimada Tomoo Shimada Ikuko Hara‐Nishimura 《The Plant journal : for cell and molecular biology》2010,61(3):519-528
The creation of transgenic plants has contributed extensively to the advancement of plant science. Establishing homozygous transgenic lines is time‐consuming and laborious, and using antibiotics or herbicides to select transformed plants may adversely affect the growth of some transgenic plants. Here we describe a novel technology, which we have named FAST (fluorescence‐accumulating seed technology), that overcomes these difficulties. Although this technology was designed for use in Arabidopsis thaliana, it may be adapted for use in other plants. The technology is based on the expression of a fluorescent co‐dominant screenable marker FAST, under the control of a seed‐specific promoter, on the oil body membrane. The FAST marker harbors a fusion gene encoding either GFP or RFP with an oil body membrane protein that is prominent in seeds. The marker protein was only expressed in a specific organ (i.e. in dry seeds) and at a specific time (i.e. during dormancy), which are desirable features of selectable and/or screenable markers. This technique provides an immediate and non‐destructive method for identifying transformed dry seeds. It identified the heterozygous transformed seeds among the T1 population and the homozygous seeds among the T2 population with a false‐discovery rate of <1%. The FAST marker reduces the length of time required to produce homozygous transgenic lines from 7.5 to 4 months. Furthermore, it does not require sterilization, clean‐bench protocols or the handling of large numbers of plants. This technology should greatly facilitate the generation of transgenic Arabidopsis plants. 相似文献
878.
879.
Motonori Kurosumi Yoshino Nishio Satoko Osawa Hisayoshi Kobayashi Takeshi Iwatsubo Taisuke Tomita Hiroyuki Miyachi 《Bioorganic & medicinal chemistry letters》2010,20(17):5282-5285
Screening of our library of peroxisome proliferator-activated receptor (PPAR) agonists yielded several phenylpropanoic acid-derived γ-secretase inhibitors (GSIs). Structure–activity relationship studies indicated that (R)-configuration of α-substituted phenylpropanoic acid structure and cinnamic acid structure is favorable to prepare Notch-sparing GSIs. 相似文献