Association mapping for chilling tolerance in elite flint and dent maize inbred lines evaluated in growth chamber and field experiments

Chilling sensitivity of maize is a strong limitation for its cultivation in the cooler areas of the northern and southern hemisphere because reduced growth in early stages impairs on later biomass accumulation. Efficient breeding for chilling tolerance is hampered by both the complex physiological response of maize to chilling temperatures and the difficulty to accurately measure chilling tolerance in the field under fluctuating climatic conditions. For this research, we used genome‐wide association (GWA) mapping to identify genes underlying chilling tolerance under both controlled and field conditions in a broad germplasm collection of 375 maize inbred lines genotyped with 56 110 single nucleotide polymorphism (SNP). We identified 19 highly significant association signals explaining between 5.7 and 52.5% of the phenotypic variance observed for early growth and chlorophyll fluorescence parameters. The allelic effect of several SNPs identified for early growth was associated with temperature and incident radiation. Candidate genes involved in ethylene signalling, brassinolide, and lignin biosynthesis were found in their vicinity. The frequent involvement of candidate genes into signalling or gene expression regulation underlines the complex response of photosynthetic performance and early growth to climatic conditions, and supports pleiotropism as a major cause of co‐locations of quantitative trait loci for these highly polygenic traits.     

Effects of fatty acid and phosphorus content of food on the growth, survival and reproduction ofDaphnia

1. Mixtures of microencapsulated lipids and Scenedesmus quadricauda grown at different degrees of P limitation were used as food for Daphnia galeata in two growth experiments. Thereby, food quality in terms of ω3-fatty acid (ω3-FA) or phosphorus (P) content could be assessed without interference from other factors.
2. ω3-highly unsaturated fatty acids (ω3-HUFA), given to Daphnia as fish oil or eicosapentaenoic acid (EPA) together with non P-limited algae, decreased the time to first reproduction. When fed fish oil, somatic growth and survival were also enhanced. Linolenic acid also decreased the time to first reproduction but to a lesser extent than EPA.
3. Food quality depended to a large extent on the degree of P limitation of Scenedesmus , which is consistent with P limitation of Daphnia. The overall impact of P was always larger than the effect of ω3-FA. Growth, survival and reproduction were elevated when Daphnia were fed non P-limited Scenedesmus compared to treatments with P-limited algae.
4. The relative importance of ω3-HUFA and P content in the food changed over a C : P gradient, with stronger effects of ω3-HUFA at low C : P ratios.     

Phylogeny of Chaetonotidae and other Paucitubulatina (Gastrotricha: Chaetonotida) and the colonization of aquatic ecosystems

Kånneby, T., Todaro, M. A., Jondelius, U. (2012). Phylogeny of Chaetonotidae and other Paucitubulatina (Gastrotricha: Chaetonotida) and the colonization of aquatic ecosystems. —Zoologica Scripta, 42, 88–105. Chaetonotidae is the largest family within Gastrotricha with almost 400 nominal species represented in both freshwater and marine habitats. The group is probably non‐monophyletic and suffers from a troubled taxonomy. Current classification is to a great extent based on shape and distribution of cuticular structures, characters that are highly variable. We present the most densely sampled molecular study so far where 17 of the 31 genera belonging to Chaetonotida are represented. Bayesian and maximum likelihood approaches based on 18S rDNA, 28S rDNA and COI mtDNA are used to reconstruct relationships within Chaetonotidae. The use of cuticular structures for supra‐specific classification within the group is evaluated and the question of dispersal between marine and freshwater habitats is addressed. Moreover, the subgeneric classification of Chaetonotus is tested in a phylogenetic context. Our results show high support for a clade containing Dasydytidae nested within Chaetonotidae. Within this clade, only three genera are monophyletic following current classification. Genera containing both marine and freshwater species never form monophyletic clades and group with other species according to habitat. Marine members of Aspidiophorus appear to be the sister group of all other Chaetonotidae and Dasydytidae, indicating a marine origin of the clade. Halichaetonotus and marine Heterolepidoderma form a monophyletic group in a sister group relationship to freshwater species, pointing towards a secondary invasion of marine environments of these taxa. Our study highlights the problems of current classification based on cuticular structures, characters that show homoplasy for deeper relationships.