A new hexaploid species of Centaurea section Acrolophus (Asteraceae) from Evvia Island,Greece

Centaurea carystea Trigas & Constantin., a new yellow‐flowered species of Centaurea from Mt. Ochi on Evvia Island (Greece), is described and illustrated. It is a member of the polymorphic C. section Acrolophus and allied to taxa of the C. attica aggregate, C. pelia and C. mantoudii. The new species appears to be a local and threatened endemic, with the total number of individuals known being less than 500. A karyological examination revealed that it is hexaploid, with 2n = 6x = 54, an unusual number in Centaurea, which may indicate a hybrid origin. To further clarify the taxonomic position of C. carystea , we used random amplification of polymorphic DNA markers of 25 plants belonging to nine species, subspecies and varieties morphologically related to the new species, together with two reference taxa. Clustering using the unweighted pair group method with arithmetic mean indicated a discrete position for C. carystea , close to but distinct from the yellow‐flowered C. mantoudii. © 2008 The Linnean Society of London, Botanical Journal of the Linnean Society, 2008, 158 , 762–774.     

Statistical and visual differentiation of subcellular imaging

Background  

Automated microscopy technologies have led to a rapid growth in imaging data on a scale comparable to that of the genomic revolution. High throughput screens are now being performed to determine the localisation of all of proteins in a proteome. Closer to the bench, large image sets of proteins in treated and untreated cells are being captured on a daily basis to determine function and interactions. Hence there is a need for new methodologies and protocols to test for difference in subcellular imaging both to remove bias and enable throughput. Here we introduce a novel method of statistical testing, and supporting software, to give a rigorous test for difference in imaging. We also outline the key questions and steps in establishing an analysis pipeline.     

A highly selective two-stage isolation method for the enumeration of Staphylococcus aureus in foods

A plate method for enumerating Staphylococcus aureus is described which combines a 1-h recovery period for stressed cells on a relatively non-selective Baird-Parker agar base followed by a 24-h growth phase in a highly selective, supplemented Baird-Parker medium added as an overlay. Tests with pure cultures showed satisfactory recovery of stressed Staph. aureus and other bacteria. Similar results were obtained with the conventional Baird-Parker procedure and with the two-stage isolation method for shrimps and poultry neck skins, but for raw minced meat, recoveries were higher with the combined method than with the conventional medium.
All colonies visible after 24 h on the two-stage medium can be counted as Staph. aureus , whereas longer incubation times and confirmatory tests are necessary to differentiate it from other organisms on conventional Baird-Parker medium.     

Francisella tularensis Harvests Nutrients Derived via ATG5-Independent Autophagy to Support Intracellular Growth

Francisella tularensis is a highly virulent intracellular pathogen that invades and replicates within numerous host cell types including macrophages, hepatocytes and pneumocytes. By 24 hours post invasion, F. tularensis replicates up to 1000-fold in the cytoplasm of infected cells. To achieve such rapid intracellular proliferation, F. tularensis must scavenge large quantities of essential carbon and energy sources from the host cell while evading anti-microbial immune responses. We found that macroautophagy, a eukaryotic cell process that primarily degrades host cell proteins and organelles as well as intracellular pathogens, was induced in F. tularensis infected cells. F. tularensis not only survived macroautophagy, but optimal intracellular bacterial growth was found to require macroautophagy. Intracellular growth upon macroautophagy inhibition was rescued by supplying excess nonessential amino acids or pyruvate, demonstrating that autophagy derived nutrients provide carbon and energy sources that support F. tularensis proliferation. Furthermore, F. tularensis did not require canonical, ATG5-dependent autophagy pathway induction but instead induced an ATG5-independent autophagy pathway. ATG5-independent autophagy induction caused the degradation of cellular constituents resulting in the release of nutrients that the bacteria harvested to support bacterial replication. Canonical macroautophagy limits the growth of several different bacterial species. However, our data demonstrate that ATG5-independent macroautophagy may be beneficial to some cytoplasmic bacteria by supplying nutrients to support bacterial growth.     

The prevalence of clinically diagnosed ankylosing spondylitis and its clinical manifestations: a nationwide register study

IntroductionPrevalence estimates of ankylosing spondylitis vary considerably, and there are few nationwide estimates. The present study aimed to describe the national prevalence of clinically diagnosed ankylosing spondylitis in Sweden, stratified according to age, sex, geographical, and socio-economic factors, and according to subgroups with ankylosing spondylitis-related clinical manifestations and pharmacological treatment.MethodsAll individuals diagnosed with ankylosing spondylitis according to the World Health Organization International Classification of Disease codes, between 1967 and 2009, were identified from the National Patient Register. Data regarding disease manifestations, patient demographics, level of education, pharmacological treatment, and geographical region were retrieved from the National Patient Register and other national registers.ResultsA total of 11,030 cases with an ankylosing spondylitis diagnosis (alive, living in Sweden, and 16 to 64 years old in December 2009) were identified in the National Patient Register, giving a point prevalence of 0.18% in 2009. The prevalence was higher in northern Sweden, and lower in those with a higher level of education. Men had a higher prevalence of ankylosing spondylitis (0.23% versus 0.14%, P < 0.001), a higher frequency of anterior uveitis (25.5% versus 20.0%, P < 0.001) and were more likely to receive tumor necrosis factor inhibitors than women (15.6% versus 11.8% in 2009, P < 0.001). Women were more likely than men to have peripheral arthritis (21.7% versus 15.3%, P < 0.001), psoriasis (8.0% versus 6.9%, P = 0.03), and treatment with oral corticosteroids (14.0% versus 10.4% in 2009, P < 0.001).ConclusionThis nationwide, register-based study demonstrated a prevalence of clinically diagnosed ankylosing spondylitis of 0.18%. It revealed phenotypical and treatment differences between the sexes, as well as geographical and socio-economic differences in disease prevalence.

Electronic supplementary material

The online version of this article (doi:10.1186/s13075-015-0627-0) contains supplementary material, which is available to authorized users.     

The keystone role of anostracans and copepods in European soda pans during the spring migration of waterbirds

1. The European soda pans of the Carpathian Basin provide important stopover sites for several waterbird species. We studied the effect of different invertebrate food types and other characteristics on the habitat choice and distribution of birds on 82 pans (in Hungary, Austria and Serbia) during spring migration. 2. Only three environmental variables proved to be significant determinants of the waterbird communities: pan density (spatial effect) along with the density of Arctodiaptomus spp. and anostracans (local effect). Variance partitioning of the data revealed that aquatic invertebrate food supply (Arctodiaptomus and anostracans) had a greater effect than pan density on the 10 investigated bird species, suggesting a dominant role of species sorting in structuring the communities. Pied avocets (Recurvirostra avosetta) and northern shovelers (Anas clypeata) differed from the other species in their strong association with densities of anostracans (avocet) and Arctodiaptomus (shoveler). 3. Anostracans and microcrustaceans, especially the most frequent Branchinecta orientalis, Arctodiaptomus spinosus and Arctodiaptomus bacillifer, can be regarded as keystone elements of this soda pan habitat because of their bottom‐up role in structuring waterbird assemblages during spring migration.     

A new species of Heth Cobb, 1898 (Nematoda: Rhigonematida: Hethidae) from an Australian millipede (Myriapoda: Diplopoda: Spirostreptida)

Abstract

A new species of nematode, Heth baudini sp. n. from a diplopod (Spirostreptida: Iulomorphidae Verhoeff, 1924) collected in Queensland, Australia, is described and illustrated. The cephalic and cervical cuticular ornamentation of females of H. baudini sp. n. is similar to those of South-East Asian and Australasian Heth species. Heth baudini sp. n. females are particularly close to Heth taynguyeni from Vietnam but can be distinguished by the shape of the lateral lappets, which in H. taynguyeni limit the trapezium-shaped region of smooth cuticle unlike the elliptical region in H. baudini sp. n., and by the presence of lateral spines only half the size. The cuticle of the H. baudini sp. n. is finely annulated along the entire body, whereas H. taynguyeni has broader rings behind the first pair of lateral spines, each consisting of five or six narrower rings separated from each other by deeper furrows. Males of H. baudini sp. n. are characterised by the presence of a bursa-like fold on the tail and can be distinguished from other species of the genus by the presence of somatic papillae embedded into the bursal fold.     

Nest desertion by a cowbird host: an antiparasite behavior or a response to egg loss?

Natural selection can favor songbirds that desert nests containingeggs of the parasitic brown-headed cowbird (Molothrus ater).However, the high variability in desertion of parasitized nestswithin species is perplexing in light of the typically highcosts of parasitism. Because nest desertion can also be a responseto partial clutch predation, we first asked if Bell's vireos(Vireo bellii) deserted nests in response to the presence ofcowbird eggs (antiparasite response hypothesis) or to egg removalby predators and female cowbirds (egg predation hypothesis).Second, we asked whether variation in nest desertion was dueto intrinsic differences among individuals or to variation innest contents. We monitored a large number of nests (n = 494)and performed a clutch manipulation experiment to test thesehypotheses. The number of vireo eggs that remained in a nestwas a strong predictor of desertion both within and among pairs.Neither the presence of a single cowbird egg, which leads tonest failure for this host, nor the number of cowbird eggs receivedin a vireo nest influenced nest desertion. Furthermore, vireosdid not desert experimental nests when we immediately exchangedcowbird eggs for vireo eggs but deserted if we removed vireoeggs and replaced them with cowbird eggs the following morning.Desertion of parasitized nests by Bell's vireos can be almostentirely explained as a response to partial or complete clutchloss and does not appear to have been altered by selection frombrood parasitism.