广西扶绥岩亮洞早更新世独角犀年龄结构的分析

岩亮洞是广西扶绥地区最近新发现的早更新世巨猿化石点,经过初步发掘,采集到了丰富的巨猿材料及大量伴生的哺乳动物化石。引人注目的是其中犀类化石居多,包括146颗完整的牙齿及十多件头后骨骼化石,从形态特征判断,这些犀类化石应属于独角犀的一新种Rhinoceros fusuiensis。岩亮洞巨猿动物群中的独角犀以种群丰度最大而不同于其他已知东亚地区的巨猿动物群中的独角犀类材料。本文从犀类牙齿的主尖釉质层、齿质暴露程度、咀嚼面的磨蚀程度等方面对岩亮洞独角犀的年龄结构进行了研究。该死亡群中至少有4头幼年个体、5头青年个体、5头成年个体和1头老年个体。依据牙齿磨蚀程度和牙齿萌出顺序对年龄结构的分析及统计显示,其中青年个体和成年个体最多,幼年个体次之,老年个体最少,其死亡的原因不是通常意义上磨耗型死亡,突发性的灾害可能是造成这种死亡年龄分布的主要原因。     

细胞因子人MK基因的克隆及在大肠杆菌中的高效表达(简报)

细胞因子Midkine(简称MK)是新发现的一类肝素结合因子家族中的一员。1988年,Kadamatsu等利用差异杂交法在经维甲酸诱导分化的小鼠畸胎瘤细胞株HM-1中首先克隆到小鼠MK基因。人MK基因则最早是从λgt10人胚肾(20-24周)cDNA库和EMBL-3人胎盘基因组库获得。成熟     

Activation of Toll-like receptor 4 is associated with insulin resistance in adipocytes

Chronic inflammation is closely associated with metabolic disorders such as obesity and type 2 diabetes, however, the underlying mechanism is unclear. Toll-like receptors (TLRs) play a key role in innate immune response as well as inflammatory signals. Here, we observed that mRNA level of TLR4 was induced during adipocyte differentiation and remarkably enhanced in fat tissues of obese db/db mice. In addition, activation of TLR4 with either LPS or free fatty acids stimulated NFkappaB signaling and expression of inflammatory cytokine genes, such as TNFalpha and IL-6 in 3T3-L1 adipocytes. Furthermore, we discovered that TLR4 activation in 3T3-L1 adipocytes provoked insulin resistance. Taken together, these results suggest that activation of TLR4 in adipocyte might be implicated in the onset of insulin resistance in obesity and type 2 diabetes.     

人质子感知受体G2A和OGR1在低氧性肺动脉高压患者外周血细胞中的表达

目的：检测人质子感知受体G蛋白偶联受体2A （G2A）和卵巢癌G蛋白偶联受体1（OGR1）在低氧性肺动脉高压（HPH）患者外周血细胞中的变化。方法：研究对象选取31例HPH患者为低氧性肺动脉高压组（HPH组）,男性16例,女性15例,年龄（65.19 ±5.86）岁。同时符合中华医学会呼吸病学分会慢性阻塞性肺疾病学组诊断标准和呼吸衰竭诊断标准,选取30例健康体检者为正常组（NC组）,男15例,女15例,年龄（63.47 ±6.16）岁。心脏彩超计算HPH组肺动脉压力、进行血气分析和肺功能检测,采集外周血检测G2A、OGR1基因mRNA表达水平、血清肿瘤坏死因子α（TNF-α）水平。结果：HPH组PaCO₂较NC组明显增高（P<0.05）,1 s用力呼气容积占预计值的百分比（FEV1pro%）和1 s用力呼气容积与用力肺活量比值（FEV1/FVC）明显低于NC组（P<0.05）。HPH组外周血中G2A mRNA及TNF-α含量明显高于NC组（P<0.05）。OGR1 mRNA与NC组无差别。HPH组G2A mRNA及TNF-α表达与肺动脉压力呈显著正相关。结论：肺动脉高压患者外周血细胞中质子感知受体G2A表达增加,TNF-α水平增加,G2A的表达和TNF-α水平与肺动脉压力呈明显正相关。     

Identification of calmodulin isoform-specific binding peptides from a phage-displayed random 22-mer peptide library

Plants express numerous calmodulin (CaM) isoforms that exhibit differential activation or inhibition of CaM-dependent enzymes in vitro; however, their specificities toward target enzyme/protein binding are uncertain. A random peptide library displaying a 22-mer peptide on a bacteriophage surface was constructed to screen peptides that specifically bind to plant CaM isoforms (soybean calmodulin (ScaM)-1 and SCaM-4 were used in this study) in a Ca2+-dependent manner. The deduced amino acid sequence analyses of the respective 80 phage clones that were independently isolated via affinity panning revealed that SCaM isoforms require distinct amino acid sequences for optimal binding. SCaM-1-binding peptides conform to a 1-5-10 ((FILVW)XXX(FILV) XXXX(FILVW)) motif (where X denotes any amino acid), whereas SCaM-4-binding peptide sequences conform to a 1-8-14 ((FILVW)XXXXXX(FAILVW)XXXXX(FILVW)) motif. These motifs are classified based on the positions of conserved hydrophobic residues. To examine their binding properties further, two representative peptides from each of the SCaM isoform-binding sequences were synthesized and analyzed via gel mobility shift assays, Trp fluorescent spectra analyses, and phosphodiesterase competitive inhibition experiments. The results of these studies suggest that SCaM isoforms possess different binding sequences for optimal target interaction, which therefore may provide a molecular basis for CaM isoform-specific function in plants. Furthermore, the isolated peptide sequences may serve not only as useful CaM-binding sequence references but also as potential reagents for studying CaM isoform-specific function in vivo.     

西双版纳热带季节雨林的粗死木质残体及其养分元素

对西双版纳热带季节雨林的粗死木质残体及养分元素贮量进行了研究。结果表明,西双版纳热带季节雨林粗死木质残体的贮量为16.2 t·hm^-2,约占地上活体生物量的4%左右。其中枯立木占32.5%,倒木占33.2%,倒木残体占12.6%,大枝占21.7%。本研究的粗死木质残体贮量低于巴西和东南亚的热带雨林,处于全球热带雨林的下限。粗死木质残体的氮、磷、钾、钙、镁5种元素的贮量分别为61.8、3.4、30.4、118.3和16.5 kg·hm^-2。其中倒木所占比例最大,为31.9%～44.8%;枯立木次之（21.5%～28.7%）;倒木残体占10.3%～25.5%;3个径级的大枝占14.4%～28.9%。枯立木的C/N、C/P和N/P要高于倒木、倒木残体和大枝。     

Elements in the N-terminal signaling sequence that determine cytosolic topology of short-chain dehydrogenases/reductases. Studies with retinol dehydrogenase type 1 and cis-retinol/androgen dehydrogenase type 1

High affinity, retinoid-specific binding proteins chaperone retinoids to manage their transport and metabolism. Proposing mechanisms of retinoid transfer between these binding proteins and membrane-associated retinoid-metabolizing enzymes requires insight into enzyme topology. We therefore determined the topology of mouse retinol dehydrogenase type 1 (Rdh1) and cis-retinoid androgen dehydrogenase type 1 (Crad1) in the endoplasmic reticulum of intact mammalian cells. The properties of Rdh1 were compared with a chimera with a luminal signaling sequence (11beta-hydroxysteroid dehydrogenase (11beta-HSD1)(1-41)/Rdh1(23-317); the green fluorescent protein (GFP) fusion proteins Rdh1(1-22)/GFP, Crad1(1-22)/GFP, and 11beta-HSD1(1-41)/GFP; and signaling sequence charge difference mutants using confocal immunofluorescence, antibody access, proteinase K sensitivity, and deglycosylation assays. An N-terminal signaling sequence of 22 residues, consisting of a hydrophobic helix ending in a net positive charge, anchors Rdh1 and Crad1 in the endoplasmic reticulum facing the cytoplasm. Mutating arginine to glutamine in the signaling sequence did not affect topology. Inserting one or two arginine residues near the N terminus of the signaling sequence caused 28-95% inversion from cytoplasmic to luminal, depending on the net positive charge remaining at the C terminus of the signaling sequence; e.g. the mutant L3R,L5R,R16Q,R19Q,R21Q faced the lumen. Experiments with N- and C-terminal epitope-tagged Rdh1 and molecular modeling indicated that a hydrophobic helix-turn-helix near the C terminus of Rdh1 (residues 289-311) projects into the cytoplasm. These data provide insight into the features necessary to orient type III (reverse signal-anchor) proteins and demonstrate that Rdh1, Crad1, and other short-chain dehydrogenases/reductases, which share similar N-terminal signaling sequences such as human Rdh5 and mouse Rdh4, orient with their catalytic domains facing the cytoplasm.     

利用癌功能类从癌基因组突变谱中识别癌基因

从大规模癌样本基因突变扫查数据中识别癌基因具有重要的意义. 一些重要功能的改变对于癌的发生发展是必需的, 因此将它们定义为癌功能类, 并从GO(Gene Ontology)中选择一组显著富集已知癌基因的细致功能类来代表它们. 为了评价以癌相关功能类作为特征识别癌基因的效果, 将已知的蛋白激酶癌基因定义为阳性金标准, 而将其他的蛋白激酶基因定义为阴性金标准. 结果表明, 与利用选择压力作为特征的方法比较, 利用癌相关功能类作为特征的方法可以更有效地识别癌基因. 进一步结合癌相关功能类与基因非同义突变个数可以产生更可靠的预测结果. 最后, 将46个注释到癌相关功能类并且其非同义突变个数至少为3的蛋白激酶基因预测为癌基因, 预测精确率达到0.42.     

鲸类繁殖生物学的研究概况

生殖是生物繁殖自身的能力,生殖过程包括生殖细胞(精子与卵子)的生成与成熟、受精过程、妊娠、胎儿的发育、分娩等环节。       

Association of mitochondrial haplogroup D and risk of esophageal cancer in Taihang Mountain and Chaoshan areas in China

Both the Taihang Mountain area in north-central China and Chaoshan area in the southeastern littoral of China are areas with high risk of esophageal cancer (EC). Our previous study confirmed that populations from the two areas might share similar matrilineal backgrounds and found that mitochondrial DNA (mtDNA) haplogroup D, especially subhaplogroups D4a and D5a, might be genetic background markers of EC in Chaoshan area. Here, to further determine whether D4a, D5a, and D might be susceptibility markers for EC in the two high-risk areas, we performed a case–control study with larger samples and analyzed the distributions of these three haplogroups in subjects (controls [n = 898] and patients [n = 768]) from the two areas. D4a haplogroup was significantly associated with increased risk of EC in Taihang Mountain subjects, especially women. D5 haplogroup was associated with EC at the general population level in the Taihang Mountain area and in subjects ≤ 60 years, especially women ≤ 60 years, in the Chaoshan area. D haplogroup was associated with EC only in subjects ≤ 60 years, especially men ≤ 60 years, in the Chaoshan area. D4a and D5 showing positive association with EC in the Taihang Mountain area became the predominant subhaplogroups of D in Chaoshan controls. In conclusion, D, D4a, and D5 haplogroups might be susceptibility markers for EC in the two high-risk areas in China, particularly D4a and D5 for the Taihang Mountain area and D and D5 for the Chaoshan area.