Available data point to a 4‐km‐high Tibetan Plateau by 40 Ma,but 100 molecular‐clock papers have linked supposed recent uplift to young node ages

The aims of this study were to synthesize data on the orogeny of the Tibetan Plateau (TP), with a focus on its elevation since the collision of the Eurasian and Indian plates, and to review the arguments in 100 phylogeny‐cum‐biogeography papers that have linked young inferred divergence times to recent TP uplift phases. I surveyed the literature on the geological history of the TP, focusing on different types of data used to infer its past height. I also tabulated the supposed TP history (and supporting references) in papers since 1998. Since the early 1990s, evidence from tectonics, isotopes, fossils and climate simulations increasingly indicates that the TP has been 4–5 km high since the mid‐Eocene. The data also indicate that the Indian summer monsoon, South‐east Asian summer monsoon, and Central Asian winter monsoon arose at different times and are unrelated to Tibetan uplift. A growing number of studies by biologists, however, are linking node ages between 0.5 and 15 Ma to specific (author‐dependent) uplift phases of the TP citing geological papers that are outdated or miscited. Biogeography of the TP thus currently appears to be in a self‐created bubble that encloses hundreds of authors and referees. Our understanding of the biogeography of Tibet requires up‐to‐date interpretation of its geological history and more fieldwork on local ecological habitat diversity, the plateau's history during the Pleistocene and the distribution of possible refugia.     

Altered integration of matrilin-3 into cartilage extracellular matrix in the absence of collagen IX

The matrilins are a family of four noncollagenous oligomeric extracellular matrix proteins with a modular structure. Matrilins can act as adapters which bridge different macromolecular networks. We therefore investigated the effect of collagen IX deficiency on matrilin-3 integration into cartilage tissues. Mice harboring a deleted Col9a1 gene lack synthesis of a functional protein and produce cartilage fibrils completely devoid of collagen IX. Newborn collagen IX knockout mice exhibited significantly decreased matrilin-3 and cartilage oligomeric matrix protein (COMP) signals, particularly in the cartilage primordium of vertebral bodies and ribs. In the absence of collagen IX, a substantial amount of matrilin-3 is released into the medium of cultured chondrocytes instead of being integrated into the cell layer as in wild-type and COMP-deficient cells. Gene expression of matrilin-3 is not affected in the absence of collagen IX, but protein extraction from cartilage is greatly facilitated. Matrilin-3 interacts with collagen IX-containing cartilage fibrils, while fibrils from collagen IX knockout mice lack matrilin-3, and COMP-deficient fibrils exhibit an intermediate integration. In summary, the integration of matrilin-3 into cartilage fibrils occurs both by a direct interaction with collagen IX and indirectly with COMP serving as an adapter. Matrilin-3 can be considered as an interface component, capable of interconnecting macromolecular networks and mediating interactions between cartilage fibrils and the extrafibrillar matrix.     

Investigating the horizontal transmission of the Cydia pomonella granulovirus (CpGV) in a model system

Repeated applications of Cydia pomonella granulovirus (CpGV) can effectively control the codling moth (CM) in apple orchards. However, it is still unknown whether horizontal transmission of the virus from infected to uninfected larvae contributes to the efficacy of the virus insecticide. Horizontal transmission of CpGV was assayed using detached apples. In experiments using artificially applied virus dots on the apple’s surface or infected CM larvae as virus inoculum, it was found that the likelihood of infection of healthy CM larvae relied mainly on the larval behavior. The amount of virus inoculum, either applied artificially or produced by the infected larvae, impacted the infection rate only to a small degree. In the experiments, CM larvae exhibited a strong preference in entry sites, increasing the chance for horizontal transmission. Depending on the experimental design, horizontal transmission rates of about 40% were observed in laboratory assays.     

Influence of UV-B radiation and nitrogen starvation on daily rhythms in phototaxis and cell shape of Euglena gracilis

The flagellate Euglena gracilis Klebs strain Z shows phototaxis and changes cell shape between oblong and round. Both cell events show daily rhythmicity. Phototaxis was highest about 2 h after light onset with a second peak of activity 9 h later. At the same times, the cells were in their most oblong shape. During the night phase the cells were phototactically inactive and round. These rhythms were altered by environmental stress, e.g. UV-B radiation (280–320 nm) and nitrogen deficiency. Artificial UV-B radiation of 0.5 W m⁻² caused a loss in phototaxis hut the peak of activity occurred at the same time as for control cells. The transition from round to oblong cell shape was slower after UV-B radiation, but the difference between the roundest and the most oblong cell shape was unchanged. Nitrogen deficiency caused a total loss of phototaxis and the cells remained round all the time. The cells lost all their chlorophyll and were, therefore, photosynthetically inactive.     

Three-dimensional reconstruction of the surface protein of Pyrodictium brockii: Comparing two image processing strategies

The three-dimensional structure of the surface layer protein of the hyperthermophilic archaebacterium Pyrodictium brockii was determined by electron crystallographic techniques to a resolution of approximately 1.6 nm. Two image processing strategies—correlation averaging and lattice unbending—were explored with regard to their potential to compensate for lattice distortions. Reconstructions performed via these two routes did not show any significant difference although the unbending approach might be expected to give superior results since, in principle, it incorporates a correction for unit cell displacement, rotation, and deformation while conventional correlation averaging compensates for displacements only. The discussion furthermore addresses some hitherto ignored problems associated with the correction of lattice disorder at higher tilts.