Mapping and analysis of the physical vulnerability of coastal Tamil Nadu

Abstract

This is an integrated study to classify Tamil Nadu Coast in terms of its vulnerability to coastal processes. It is accomplished through estimating Coastal Vulnerability Index (CVI) for the entire stretch of the said coast using weighted averages of six parameters, viz., geomorphology, shoreline changes, coastal slope, and relative sea level rise, mean significant wave height and mean tidal range. Thus, CVI evaluates the state of the coast in terms of level of risk hovering on it as and when it is affected by oceanic hazards. The target of this study is to evaluate the vulnerability status of coastal stretches of 35 taluks of Tamil Nadu. Twenty one percent of the coastal stretch is under very high vulnerability level. Following this is 36% stretch under high vulnerability state. Another 34% coastal stretch is in moderate setting. Low vulnerability state prevails about 6%. Further, it is learnt that there are only 2% of Tamil Nadu coastal region coming under the least vulnerable category. The study revealed the very high vulnerability of Nagapattinam coastal region. The present study may also help create awareness among people about marine natural hazards such as coastal erosion, inundation, loss of life and their properties.     

The Impact of Artemisinin Combination Therapy and Long-Lasting Insecticidal Nets on Forest Malaria Incidence in Tribal Villages of India, 2006–2011

Introduction

New tools for malaria control, artemisinin combination therapy (ACT) and long-lasting insecticidal nets (LLINs) were recently introduced across India. We estimated the impact of universal coverage of ACT and ACT plus LLINs in a setting of hyperendemic, forest malaria transmission.

Methods

We reviewed data collected through active and passive case detection in a vaccine trial cohort of 2,204 tribal people residing in Sundargarh district, Odisha between 2006 and 2011. We compared measures of transmission at the village and individual level in 2006–2009 versus 2010–2011 after ACT (in all villages) and LLINs (in three villages) were implemented.

Results

During 2006–2009 malaria incidence per village ranged from 156–512 per 1000 persons per year and slide prevalence ranged from 28–53%. Routine indoor residual spray did not prevent seasonal peaks of malaria. Post-intervention impact in 2010–2011 was dramatic with ranges of 14–71 per 1000 persons per year and 6–16% respectively. When adjusted for village, ACT alone decreased the incidence of malaria by 83% (IRR 0.17, 95%CI: 0.10, 0.27) and areas using ACT and LLINs decreased the incidence of malaria by 86% (IRR 0.14, 95%CI: 0.05, 0.38). After intervention, the age of malaria cases, their parasite density, and proportion with fever at the time of screening increased.

Conclusions

ACT, and LLINs along with ACT, effectively reduced malaria incidence in a closely monitored population living in a forest ecotype. It is unclear whether LLINs were impactful when prompt and quality antimalarial treatment was available. In spite of universal coverage, substantial malaria burden remained.     

The Lipid Composition and Physical Properties of the Yeast Vacuole Affect the Hemifusion–Fusion Transition

Yeast vacuole fusion requires the formation of SNARE bundles between membranes. Although the function of vacuolar SNAREs is controlled in part by regulatory lipids, the exact role of the membrane in regulating fusion remains unclear. Because SNAREs are membrane‐anchored and transmit the force required for fusion to the bilayer, we hypothesized that the lipid composition and curvature of the membrane aid in controlling fusion. Here, we examined the effect of altering membrane fluidity and curvature on the functionality of fusion‐incompetent SNARE mutants that are thought to generate insufficient force to trigger the hemifusion–fusion transition. The hemifusion–fusion transition was inhibited by disrupting the 3Q:1R stoichiometry of SNARE bundles with the mutant SNARE Vam7p^Q283R. Similarly, replacing the transmembrane domain of the syntaxin homolog Vam3p with a lipid anchor allowed hemifusion, but not content mixing. Hemifusion‐stalled reactions containing either of the SNARE mutants were stimulated to fuse with chlorpromazine, an amphipathic molecule that alters membrane fluidity and curvature. The activity of mutant SNAREs was also rescued by the overexpression of SNAREs, thus multiplying the force transferred to the membrane. Thus, we conclude that either increasing membrane fluidity, or multiplying SNARE‐generated energy restored the fusogenicity of mutant SNAREs that are stalled at hemifusion. We also found that regulatory lipids differentially modulated the complex formation of wild‐type SNAREs. Together, these data indicate that the physical properties and the lipid composition of the membrane affect the function of SNAREs in promoting the hemifusion–fusion transition.     

A database of six eukaryotic hypothetical genes and proteins

Assigning functions to proteins of unknown function is of considerable interest to the proteomic researchers as the genes encoding them are conserved over various species. Here, we describe HypoDB, a database of hypothetical genes and proteins in six eukaryotes. The database was collected and organized based on the number of entries in each chromosome with few annotations. Hypothetical protein database contains information related to gene and protein sequences, chromosome number and location, secondary and tertiary structure related data. AVAILABILITY: The database is available for free at http://www.trimslabs.com/database/hypodb/index.html.     

Phytoextracts-Synthesized Silver Nanoparticles Inhibit Bacterial Fish Pathogen Aeromonas hydrophila

Fish disease is a major stumbling block towards sustainable growth of the fisheries sector. Aeromonas hydrophila, which is a major infectious aquatic pathogen is reportedly the causative agent of ulcers, fin-rot, tail-rot, hemorrhagic septicemia in fish, and has reportedly developed resistance against many of the available antibiotics. In this context, the inhibitory function of silver nanoparticles (AgNPs) against A. hydrophila was studied to evaluate its possible application in aquaculture as alternative to antibiotics. AgNPs were synthesized using the leaf extracts of subtropical plants Mangifera indica (Mango), Eucalyptus terticornis (Eucalyptus), Carica papaya (Papaya) and Musa paradisiaca (Banana). The absorbance maxima, size range and shape of the AgNPs as characterized by the UV–Vis spectroscopy, high resolution transmission electron microscopy (HR-TEM), and energy dispersive X-ray spectroscopy (EDX) were, Mangifera—442, 50–65 nm, ovular; Eucalyptus—465, 60–150 nm, oval; Carica—442, 25–40 nm, round, irregular; and Musa—454, 10–50 nm, round, irregular, respectively. Well-diffusion of these AgNPs for their antimicrobial characteristics exhibited that, the papaya leaf extract synthesized AgNPs had maximum antimicrobial activity at 153.6 μg/ml concentrations, and that from the eucalyptus leaves was least effective. As observed, the potency of the nanoparticles enhanced with the decrease in particle size, from 60–150 nm in eucalyptus to 25–40 nm in papaya. Due to its purely natural sourcing, phytosynthesized AgNPs can be applied as alternative to antibiotics and other biocides as a cost-effective and eco-friendly therapeutic agent against A. hydrophila stimulated diseases in aquatic animals.     

DFT study on the structure and explosive properties of nitropyrazoles

Ab initio molecular orbital calculations at the B3LYP/aug-cc-pVDZ level have been carried out to explore the structure, stability, sensitivity and band gap of nitropyrazoles. Kamlet and Jacob equations were used to calculate the detonation velocity and detonation pressure of designed compounds. The explosive properties of polynitropyrazole-N-oxides appear to be higher compared with those of octanitrocubane and 2,4,6,8,10,12-hexanitro-2,4,6,8,10,12-hexa azaisowurtzitane. The sensitivity, heat of explosion, density, detonation velocity and detonation pressure are presumably related to the number and the relative positions of NO₂ groups on the pyrazole ring.     

Zeaxanthin and menaquinone-7 biosynthesis in Sphingobacterium multivorum via the methylerythritol phosphate pathway

Feeding of [1-(13)C]glucose, [U-(13)C(6)]glucose, [3-(13)C]alanine and [1-(13)C]acetate to Sphingobacterium multivorum showed that this bacterium utilizes the methylerythritol phosphate pathway for the biosynthesis of menaquinone-7 and zeaxanthin, a carotenoid of industrial importance. Differential incorporation of the labeled precursors gave some insight into the preferred carbon sources involved in isoprenoid biosynthesis.     

Is Excess PbI2 Beneficial for Perovskite Solar Cell Performance?

Unreacted lead iodide is commonly believed to be beneficial to the efficiency of methylammonium lead iodide perovskite based solar cells, since it has been proposed to passivate the defects in perovskite grain boundaries. However, it is shown here that the presence of unreacted PbI₂ results in an intrinsic instability of the film under illumination, leading to the film degradation under inert atmosphere and faster degradation upon exposure to illumination and humidity. The perovskite films without lead iodide have improved stability, but lower efficiency due to inferior film morphology (smaller grain size, the presence of pinholes). Optimization of the deposition process resulted in PbI₂‐free perovskite films giving comparable efficiency to those with excess PbI₂ (14.2 ± 1.3% compared to 15.1 ± 0.9%) Thus, optimization of the deposition process for PbI₂‐free films leads to dense, pinhole‐free, large grain size perovskite films which result in cells with high efficiency without detrimental effects on the film photostability caused by excess PbI₂. However, it should be noted that for encapsulated devices illuminated through the substrate (fluorine‐doped tin oxide glass, TiO₂ film), film photostability is not a key factor in the device degradation.