Galium procurrens,a new diploid relic species of theG. sylvaticum-group from the Balkan Peninsula

Galium procurrens is described as a new diploid relic species from Montenegro/N. Albania and SW. Bulgaria. It is related to the tetraploidG. laevigatum and other diploid and polyploid taxa of theG. sylvaticum-group inhabiting European deciduous forests.     

基于SPEI指数的淮河流域干旱时空演变特征及影响研究

运用淮河流域149个气象站1962—2016年逐日气温、降水资料以及历史旱情资料,基于SPEI、EOF和M-K等方法分析淮河流域的干旱时空特征,研究干旱的时空演变规律并揭示其对农业生产的影响。结果表明:(1)基于SPEI得到的干旱频次与受灾、成灾面积的相关性通过了0.1的显著性水平检验,表明SPEI在淮河流域具有较好的适用性;(2)淮河流域干旱发生时间差异明显,干旱次数呈现波动变化,发生重旱和特旱次数占总干旱的比重是20.0%,其中重旱和特旱在1960s比重最大(24.8%),其次是2010s(15.8%),在1980s比重最低(10.0%);(3)干旱的空间分布差异大,淮河流域干旱频率在27.76%—36.04%之间,西北部和东南部发生干旱强度较西南部、东北部及中部低;(4)淮河流域总体呈干旱化的趋势,从中部到四周呈现由高到低递减的趋势变化,且空间模态表现为全区一致型、南北相反型和东西相反型。     

Ontogenetic trait variation and metacommunity effects influence species relative abundances during tree community assembly

Predicting species abundance is one of the most fundamental pursuits of ecology. Combining the information encoded in functional traits and metacommunities provides a new perspective to predict the abundance of species in communities. We applied a community assembly via trait selection model to predict quadrat-scale species abundances using functional trait variation on ontogenetic stages and metacommunity information for over 490 plant species in a subtropical forest and a lowland tropical forest in Yunnan, China. The relative importance of trait-based selection, mass effects, and stochasticity in shaping local species abundances is evaluated using different null models. We found both mass effects and trait selection contribute to local abundance patterns. Trait selection was detectable at all studied spatial scales (0.04–1 ha), with its strength stronger at larger scales and in the subtropical forest. In contrast, the importance of stochasticity decreased with spatial scale. A significant mass effect of the metacommunity was observed at small spatial scales. Our results indicate that tree community assembly is primarily driven by ontogenetic traits and metacommunity effects. Our findings also demonstrate that including ontogenetic trait variation into predictive frameworks allows ecologists to infer ecological mechanisms operating in community assembly at the individual level.     

放射污染区古菌分离及多样性分析

【目的】研究放射污染区古菌多样性。【方法】放射污染区采集土样,采用甘油-精氨酸培养基(GJ)、甘油-天冬氨酸培养基(C1)、海藻糖-肌酸培养基(B7)、甘露醇-丙氨酸培养基(Z5)、干酪素-甘露醇培养基(CMKA)、壳聚糖-天冬酰胺培养基(F6)、甘露醇-酸水解酪蛋白培养基(GW1)、CM培养基、HP培养基和KC培养基10种分离培养基,采用梯度稀释法对古菌进行分离,将分离获得的菌株经形态特征,16S rRNA基因片段扩增及限制性内切酶酶切,选取酶切图谱中存在差异性的条带进行测序,最终通过序列比对,聚类分析,获得不同种类的古菌资源。【结果】从该土样中共获得了256株古菌,最终筛选出71株不同类型的古菌,这71株古菌均属于广古菌门,盐杆菌纲,盐杆菌目,盐杆菌科,分布于盐陆生菌属(Haloterrigena)、纳白菌属(Natrialba)、盐球菌属(Halococcus)、盐红菌属(Halorubrum)、盐长寿菌属(Halovivax)、纳线菌属(Natrinema)、盐碱球菌属(Natronococcus)、盐二型菌属(Halobiforma)、盐惰菌属(Halopiger)、盐池栖菌属(Halostagnicola)、富盐菌属(Haloferax)11个属,26个种,其中31株菌的16S rRNA基因序列与已有效发表菌株的序列相似性小于98%,Haloterrigena为该土样的优势菌属。对于分离效果较好的F6培养基采用了梯度营养成分的稀释,最终获得了19株古菌,这些菌株相互之间存在一定的差异性。【结论】本次分离获得了大量的古菌,表明放射污染区存在着较为丰富的古菌资源,其中蕴藏着多种新的物种类型,具有较大的研究价值。     

TBK1 Facilitates GLUT1-Dependent Glucose Consumption by suppressing mTORC1 Signaling in Colorectal Cancer Progression

Intestinal inflammation is a vital precipitating factor of colorectal cancer (CRC), but the underlying mechanisms are still elusive. TANK-binding kinase 1 (TBK1) is a core enzyme downstream of several inflammatory signals. Recent studies brought the impacts of TBK1 in malignant disease to the forefront, we found aberrant TBK1 expression in CRC is correlated with CRC progression. TBK1 inhibition impaired CRC cell proliferation, migration, drug resistance and tumor growth. Bioinformatic analysis and experiments in vitro showed overexpressed TBK1 inhibited mTORC1 signaling activation in CRC along with elevated GLUT1 expression without inducing GLUT1 translation. TBK1 mediated mTORC1 inhibition induces intracellular autophagy, which in turn decreasing GLUT1 degradation. As a rescue, blocking of autophagosome and retromer respectively via autophagy-related gene 7 (ATG7) or TBC1 Domain Family Member 5 (TBC1D5) silence diminished the regulation of TBK1 to GLUT1. GLUT1 staining presented that TBK1 facilitated GLUT1 membrane translocation which subsequently enhanced glucose consumption. Inhibitor of TBK1 also decreased GLUT1 expression which potentiated drug-sensitivity of CRC cell. Collectively, TBK1 facilitates glucose consumption for supporting CRC progression via initiating mTORC1 inhibition induced autophagy which decreases GLUT1 degradation and increases GLUT1 membrane location. The adaptive signaling cascade between TBK1 and GLUT1 proposes a new strategy for CRC therapy.     

Chromosome-level genome assembly and characterization of Sophora Japonica

Sophora japonica is a medium-size deciduous tree belonging to Leguminosae family and famous for its high ecological, economic and medicinal value. Here, we reveal a draft genome of S. japonica, which was ∼511.49 Mb long (contig N50 size of 17.34 Mb) based on Illumina, Nanopore and Hi-C data. We reliably assembled 110 contigs into 14 chromosomes, representing 91.62% of the total genome, with an improved N50 size of 31.32 Mb based on Hi-C data. Further investigation identified 271.76 Mb (53.13%) of repetitive sequences and 31,000 protein-coding genes, of which 30,721 (99.1%) were functionally annotated. Phylogenetic analysis indicates that S. japonica separated from Arabidopsis thaliana and Glycine max ∼107.53 and 61.24 million years ago, respectively. We detected evidence of species-specific and common-legume whole-genome duplication events in S. japonica. We further found that multiple TF families (e.g. BBX and PAL) have expanded in S. japonica, which might have led to its enhanced tolerance to abiotic stress. In addition, S. japonica harbours more genes involved in the lignin and cellulose biosynthesis pathways than the other two species. Finally, population genomic analyses revealed no obvious differentiation among geographical groups and the effective population size continuously declined since 2 Ma. Our genomic data provide a powerful comparative framework to study the adaptation, evolution and active ingredients biosynthesis in S. japonica. More importantly, our high-quality S. japonica genome is important for elucidating the biosynthesis of its main bioactive components, and improving its production and/or processing.     

一氧化氮对植物重金属胁迫抗性的影响研究进展

一氧化氮(NO)作为一种重要的信号分子,在调节植物重金属胁迫抗性方面上起着非常重要的作用。综述了NO在植物体内的产生途径,重金属胁迫下植物体内内源NO含量的变化以及外源NO与内源NO对植物重金属胁迫抗性的影响。大量研究表明外源NO能够增强植物对重金属胁迫的抗性,一方面是通过增强植物细胞的抗氧化系统或直接清除活性氧,另一方面是通过影响植物对重金属的吸收以及重金属在植物细胞内的分布。然而内源NO在调节植物重金属胁迫抗性上的功能角色仍存在争议。有些研究表明内源NO是有益的,能够缓解重金属胁迫诱导的毒性;但是也有证据表明内源NO是有害的,能够通过促进植物对重金属的吸收以及对植物螯合素进行S-亚硝基化弱化其解毒功能,从而参与重金属诱导的毒害反应和细胞凋亡过程。     

西瓜连作对土壤主要微生物类群和土壤酶活性的影响

从昌乐不同种植年限西瓜大棚采集土壤,测定了连续种植6、8、10、14和20年西瓜大棚土壤中细菌、放线菌和真菌数量、土壤酶活性及土壤理化特性状的变化特点.结果表明:随着种植年限的增加,土壤中细菌、放线菌呈现先升后降趋势;真菌数量变化趋势则与之相反;蛋白酶、多酚氧化酶也同样呈现先升后降趋势,脲酶呈下降趋势,蔗糖酶呈上升趋势;同时在连作栽培过程中,土壤中速效氮含量较为稳定,速效钾和速效磷的含量随着连作年限的增加出现少量积累,土壤酸化日趋严重.讨论了连作条件下土壤微生物数量与土壤酶活性及土壤理化性状之间的关系.     

六盘山典型森林伴随降水的总有机碳(TOC)通量变化特征

在六盘山香水河小流域,选择6种典型森林样地,测定了2011年生长季的大气降水、穿透水、干流、枯落物渗漏水和主根系层(0—30 cm深)土壤渗漏水的总有机碳(TOC)浓度及其相应的通量变化。结果表明,在降水转化为由穿透雨和干流组成的林下降水中,所有样地的TOC浓度都不同程度地增大;虽然林冠截持使林下降水减小,但因雨水淋洗和与林冠发生碳交换,各样地林下降水携带的生长季TOC通量(kg/hm2)(华北落叶松人工林132.28、华山松次生林106.56、油松人工林94.10、灌木林79.49、桦木林66.52、辽东栎次生林63.01)都比林外降水(53.17)不同程度地明显增大,整体看来,林冠的TOC淋出作用在针叶林很大,在阔叶林较弱。在6种森林样地的枯落物层渗漏水中,其TOC浓度彼此相差不大,平均为24.51 mg/L,高于林冠穿透水的TOC浓度;受枯落物截持部分降水及与枯落物TOC交换的影响,4个样地枯落物渗漏水的TOC通量(kg/hm2)(桦木次生林84.35、野李子灌丛129.35、辽东栎次生林79.21、油松人工林114.93)都比其林下降水TOC通量增加了,但华北落叶松人工林和华山松次生林的TOC通量分别降至90.76和104.90 kg/hm2。在测定的华北落叶松人工林和华山松次生林的主根系层(0—30 cm)土壤渗漏水中,TOC浓度均低于枯落物渗漏水;由于水量减小和与土壤发生碳交换,土壤渗漏水的TOC通量均显著低于枯落物渗漏水,两个林分样地分别降至43.04和66.33 kg/hm2。整体来看,林外降水携带的TOC输入通量在林地TOC输入中占有重要地位,林冠的TOC淋洗使其程度不同地增加TOC通量,枯落物层具有增加或减少TOC通量的作用,但主根系层土壤会显著减少TOC输出通量,所以是固定TOC的重要场所。     

氧化磷脂与动脉粥样硬化

磷脂是构成生物膜和脂蛋白的重要成分,容易在自由基或非自由基以及酶促条件下发生氧化修饰,形成氧化磷脂(oxidized phospholipids,OxPLs),并进一步产生具有不同生物活性的氧化产物.临床证据表明,OxPLs在动脉粥样硬化(ath-erosclerosis,AS)发展过程中不断生成和转化,并在病变处积累...