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Summary
Colletotrichum gloeosporioides could grow and sporulate on a wide range of pH (viz., from 3.0 to 8.5). The best growth was obtained at pH 6.0. Mannitol proved to be the best carbon source. Good growth and sporulation were also observed on maltose, glucose, galactose and sucrose. Nitrates supported better growth than ammonium compounds. Glutamic acid was found to be the best amino acid. Nitrites inhibited the growth completely at acid pH values but they supported growth at alkaline pH. Mannitol-glutamic acid was most suitable carbon-nitrogen combination for growth. Magnesium sulphate was the only sulphur source which was good both for growth and sporulation. The organism could not grow on media lacking carbon, nitrogen or sulphur. 相似文献
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Sunil Palchaudhuri Ranajit Kumar Dipak Sen Ruma Pal Sajal Ghosh Banwarilal Sarkar Sujit K. Bhattacharya Sudhir C. Pal 《FEMS microbiology letters》1985,30(1-2):187-191
Abstract Multiple antibiotic-resistant Shigella dysenteriae type 1 isolates from a recent epidemic in West Bengal (India) showed identical plasmid patterns. All isolates were resistant to ampicillin (Am), chloramphenicol (Cm), tetracycline (Tc), streptomycin (Sm) and trimethoprim (Tp) and contained 6 plasmids, ranging from 2.5–120 kb. The Am resistance determinant was located on the 120 kb plasmid. This plasmid was unstable when the S. dysenteriae strains were grown above 37°C. The Bangladesh strains of S. dysenteriae type 1 showed identical plasmid patterns, except that many isolates were Am-sensitive and lacked the 120 kb plasmid. In strains from both Bangladesh and West Bengal, predominantly group-B plasmids conferred resistance to Cm and Tc. Comparisons of Eco R1 fragments generated from the total plasmid DNA content of each strain support the view that the plasmids present in the S. dysenteriae type 1 strains isolated from all recent epidemics in India and Bangladesh were identical. 相似文献
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Beatriz Mello Qiqing Tao Jose Barba‐Montoya Sudhir Kumar 《Molecular ecology resources》2021,21(1):122-136
Simultaneous molecular dating of population and species divergences is essential in many biological investigations, including phylogeography, phylodynamics and species delimitation studies. In these investigations, multiple sequence alignments consist of both intra‐ and interspecies samples (mixed samples). As a result, the phylogenetic trees contain interspecies, interpopulation and within‐population divergences. Bayesian relaxed clock methods are often employed in these analyses, but they assume the same tree prior for both inter‐ and intraspecies branching processes and require specification of a clock model for branch rates (independent vs. autocorrelated rates models). We evaluated the impact of a single tree prior on Bayesian divergence time estimates by analysing computer‐simulated data sets. We also examined the effect of the assumption of independence of evolutionary rate variation among branches when the branch rates are autocorrelated. Bayesian approach with coalescent tree priors generally produced excellent molecular dates and highest posterior densities with high coverage probabilities. We also evaluated the performance of a non‐Bayesian method, RelTime, which does not require the specification of a tree prior or a clock model. RelTime's performance was similar to that of the Bayesian approach, suggesting that it is also suitable to analyse data sets containing both populations and species variation when its computational efficiency is needed. 相似文献
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Ekambar R. Kandimalla Jamal Temsamani Sudhir Agrawal 《Nucleosides, nucleotides & nucleic acids》2013,32(3-5):1031-1035
Abstract 2′-O-methylribonucleoside methylphosphonamidites are synthesized and incorporated into oligonucleotides to obtain chimeric antisense oligonucleotides. The resulting oligonucleotide binds to their target RNA/DNA sequences efficiently and stable in a medium containing bovine serum. 相似文献
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Abstract An oligodeoxynucleotide designed to bind to a single stranded guanine rich DNA sequence through Watson-Crick followed by Hoogsteen hydrogen bonds was found to destabilize quadruplex structure formed by the target sequence. However, the conventional antisense and antigene oligonucleotides were unable to destabilize the same quadruplex structure. 相似文献
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Sudhir Agrawal Zhiwei Jiang Qiuyan Zhao Denise Shaw Daisy Sun Carl Saxinger 《Nucleosides, nucleotides & nucleic acids》2013,32(7-9):927-936
Abstract Antisense oligonucleotides are being studied as novel therapeutic agents. To further improve the properties of antisense oligonucleotides, we have synthesized phosphorothioate oligonucleotides containing methylphosphonate linkages at the 5′-end, the 3′-end, or in the center, and have evaluated the impact of these linkages on the biophysical properties, biological properties, and some of the safety parameters. 相似文献