Multivariate analysis of avian vocalizations

This paper examines several multivariate techniques that may be used in analyzing vocalizations. A general comparison of multiple linear regression, discriminant analysis, canonical correlation, cluster analysis, and principal components analysis is included with a discussion of when these tests may be appropriate for vocalization studies. Examples using vocalizations from Laysan and black-footed albatrosses are given to illustrate each technique.     

Microbial biomass C and N,and mineralizable-N,in litter and mineral soil under Pinus radiata on a coastal sand: Influence of stand age and harvest management

Microbial biomass C and N, and anaerobically mineralizable-N, were measured in the litter and mineral soil (0–10 cm and 10–20 cm depth) of Pinus radiata plantations in two trials on a nitrogen-deficient coastal sand. The trials comprised (a) stands of different age (1 to 33 years), with five of the seven stands studied being second rotation, and (b) a harvest-management trial, with stands established after different harvesting treatments of the first-rotation trees and understorey development controlled by manual weeding and chemical sprays. The harvest-management stands were sampled in the fifth year after the second-rotation establishment.In the stands of different age, the levels of microbial biomass C and N, and also mineralizable-N, in the litter and mineral soil showed no relationship with tree age and were similar to those in the oldest (33 years) stands of P. radiata. In the harvesting trial, five years after establishment of the second rotation, levels of microbial N and mineralizable-N in the litter and mineral soil were generally lowest where whole trees and the original forest floor had been removed; they were higher in associated plots in which the original forest floor had been removed but fertilizer N was regularly applied. No marked differences were then found between the other harvest treatments, viz. whole-tree harvest, stem-only harvest with slash remaining on site, and stem-only harvest plus extra added slash materials. In each trial, levels of microbial C and N and mineralizable-N were closely related to total C, and especially total N, in 0–10 cm depth mineral soil, but not generally in litter. Respiratory measurements strongly suggest that the microbial populations in mineral soil had a high metabolic activity.On an area basis in the harvest-management trial, total tree N and microbial N in the litter and mineral soil were lowest in stands where the original forest floor had been removed. In this particular treatment, microbial N in the litter plus mineral soil (0–20 cm depth) after five years of second-rotation growth comprised 7.3% of the total ecosystem N; values in the other treatments ranged between 5.6 and 6.0%.Our results emphasise the importance of slash and litter, and probably volunteer shrubs and herbaceous under-storey species, in conserving pools of potentially available N during the early stages of tree development.     

Genetic locus (nmp-1) affecting the principal outer membrane protein of Neisseria gonorrhoeae.

An increase in the apparent molecular weight of the principal outer membrane protein (POMP) of Neisseria gonorrhoeae is associated with introduction of the penB2 genetic marker, which results in low-level, relatively nonspecific antibiotic resistance. Limited proteolysis of the two forms of POMP showed that they had few if any peptides in common. The nonspecific antibiotic resistance of penB2 was separated from the change in POMP by genetic transformation and by isolation of spontaneous penB mutants that showed no change in POMP. The genetic locus involved in the change from one POMP to another, which we have designated nmp-1, is closely linked to, but not identical with, penB2.     

Altered crystal violet permeability and lytic behavior in antibiotic-resistant and -sensitive mutants of Neisseria gonorrhoeae.

Wild-type, antibiotic-resistant and hypersensitive isogenic strains of Neisseria gonorrhoeae were studied for uptake of crystal violet, rates of autolysis, and response to lysozyme. Total uptake of crystal violet was similar in all strains at 0 C but varied significantly at 37 C. Mutation at the nonspecific resistance locus ery resulted in relative impermeability to crystal violet at 37 C, as compared to wild type. The penetration barrier to crystal violet at 37 C was overcome by addition of 5 mM ethylenediaminetetraacetic acid. Mutation at ery also resulted in reduced rates of autolysis and reduced sensitivity to high concentrations of lysozyme under conditions of divalent cation (Mg2+) depletion. In contrast, mutation at the nonspecific drug hypersensitivity locus env resulted in increased uptake of crystal violet at 37 C, due to increased binding of dye to crude envelope as well as increased penetration into cytoplasm. The env mutants were also more rapidly autolytic and more sensitive to lysozyme than wild type in the absence of Mg2+. These results suggest that the cell envelopes of ery mutants are more stable and less permeable and those of env mutants are less stable and more permeable than wild-type strains.     

Mutation to erythromycin dependence in Escherichia coli K-12

A nitrosoguanidine-induced mutant of Escherichia coli K-12 strain JC12 was absolutely dependent on erythromycin or related macrolide antibiotics for growth. The only other drugs which permitted growth (lincomycin and chloramphenicol) are, like the macrolides, inhibitors of the 50S ribosome. The order of relative effectiveness of these drugs was macrolides > lincomycin > chloramphenicol. Rates of growth with all drugs were concentration dependent. Erythromycin starvation was followed by normal rates of increase in cell mass and macromolecular synthesis for approximately one mass-doubling time, after which macromolecular synthesis abruptly ceased and cell lysis and death occurred. The dependent mutant gave rise spontaneously to revertants to independence with very high frequency (10(-4)). The gene (mac) for macrolide dependence is located near minute 25 on the E. coli chromosome; it does not result in increased resistance to these drugs. A separate gene for erythromycin resistance (eryA) is located in the cluster of ribosomal structural genes near spc, close to minute 63. Dependence on macrolides was most clearly evident in strains carrying mutations at both eryA and mac.     

Chromosomal location of antibiotic resistance genes in Neisseria gonorrhoeae.

Transformation with purified plasmid and chromosomal deoxyribonucleic acid from a clinical isolate of Neisseria gonorrhoeae showed that each of seven loci affecting drug resistance (penA, penB, ery, str, tet, chl, and env) was chromosomal.     

Locomotory behavior, contact inhibition, and pattern formation of 3T3 and polyoma virus-transformed 3T3 cells in culture

The social behavior of 3T3 cells and their polynoma virus-transformed derivative (Py3T3 cells) was examined by time-lapse cinemicrography in order to determine what factors are responsible for the marked differences in the patterns formed by the two cell lines in culture. Contrary to expectations, both cell types have been found to exhibit contact inhibition of cell locomotion. Therefore, the tendency of 3T3 cells to form monolayers and of Py3T3 cells to form crisscrossed multilayers cannot be explained on the basis of the presence versus the absence of contact inhibition. Morevover, with the exception of cell division control, the social behavior of the two cell types is qualitively similar. Both exhibit cell underlapping and, after contact between lamelliopodia, both show inhibition of locomotory activity and adhesion formation. Neither cell type was observed to migrate over the surface of another cell. The two cell types do show quantitative differences in the frequency of underlapping, the frequency with which contact results in inhibition of locomotion, and the proportion of the cell margin that adheres to the substratum. The increased frequency pf Py3T3 underlapping is correlated with the reduced frequency of substratum adhesions, which in turn favors underlapping. On the basis of these observations, it is concluded that the differences in culture patterns are the result of differences in the shapes of the individual cells, such that underlapping, and hence crisscrossing, is favored in Py3T3 cell interactions and discouraged in 3T3 cells.