High-frequency conjugal transfer of a gonococcal penicillinase plasmid.

Gonococci containing a 24 X 10(6)-dalton conjugal plasmid were able to mobilize for transfer a smaller, non-self-transmissible penicillinase (Pcr) plasmid with high frequency under appropriate conditions. In some strains, over 10% of donor colony-forming units transferred the Pcr plasmid in a mating of less than 2 h, which suggests that the conjugal system was naturally derepressed. Colony-opacity variants containing different quantities of an approximately 28,000-dalton outer membrane protein were altered in their ability to act as conjugal donors and recipients. Maximal transfer of the Pcr plasmid was observed between transparent donors and recipients, lacking appreciable amounts of the 28,000-dalton protein. Under conditions of high-frequency Pcr plasmid mobilization, no conjugal mobilization of chromosomal markers could be discerned.     

Entry of double-stranded deoxyribonucleic acid during transformation of Neisseria gonorrhoeae.

The state of donor deoxyribonucleic acid after entry into competent cells was examined by assaying the transformed cell lysates for donor-marker transforming activity and density of donor deoxyribonucleic acid in CsCl gradients. The experiments showed that deoxyribonucleic acid entered in native, double-stranded form.     

Pairing of inosine with adenosine in codon position two in the translation of polyinosinic acid

Poly (I) codes for valine even more than for glycine. Since the ratio is constant over a wide range of Mg²⁺ concentrations the ambiguity appears to be inherent in the translation of I-I-I, rather than induced by the relatively high Mg²⁺ concentration (or the streptomycin) required with this messenger. These findings indicate that I in codon position 2 can pair readily not only with C (complementing glycine codon GG_⁵) but also with A (complementing valine codon GU_).I in anticodon position 3 is also known to pair with A (as well as with U and C). Crick's model for this pair would require a large increase in interstrand distance, rather than simply “wobble”. This stretch would be avoided in an alternative model, suggested by Sakore &; Sobell (1969), in which A would rotate from the usual anti to the syn conformation. Since a large stretch would seem difficult to accommodate in the less flexible middle codon position the present findings suggest that the rotation model for I·A pairing merits further exploration.     

Physiological and 15N-NMR analysis of molecular nitrogen fixation by Methanococcus thermolithotrophicus, Methanobacterium bryantii and Methanospirillum hungatei

Two mesophilic methanogenic bacteria, Methanobacterium bryantii strain MOH and Methanospirillum hungatei strain GP1 were demonstrated, using several different experimental approaches, to fix dinitrogen. Evidence includes (1) growth with N2 as the sole nitrogen source; (2) incorporation of 15N2 into cellular material (both soluble amino acid pools and insoluble cell protein and other macromolecules) detected by 15N-NMR spectroscopy; (3) acetylene reduction to ethylene by the cells, and inhibition of this reaction by bromoethanesulfonic acid (BES), a methanogen inhibitor. High-resolution 15N-NMR analysis of ethanol extracts of these organisms and cross-polarization magic-angle sample spinning analysis of the solid debris from these extracts are compared to labeled material from Methanococcus thermolithotrophicus, a methanogen previously determined to fix dinitrogen.     

Influence of soil type,crop and air drying on residual carbohydrate content and aggregate stability after treatment with periodate and tetraborate

Summary The relationship between the water stability of microaggregates and the residual carbohydrate content of soil was examined in 15 soils from 7 soil series under various cultivations. The carbohydrate was progressively removed by increasing the time of treatment with 0.02M periodate and 0.1M tetraborate. The resulting decrease in reducing sugar content was significantly correlated with an increased disruption of microaggregates (>45 m) as determined by a turbidimetric method. The most effective treatment removed about 80% of the soil carbohydrate and caused an increase of about 75% in the fraction of microaggregates (<45 m) compared to untreated soil.15–20 percent of the soil carbohydrate was resistant to oxidation by periodate, even after prolonged reaction times and contained a higher relative proportion of glucose, arabinose, and xylose than the oxidised material. Sugars typical of microbial sources, mannose, galactose, rhamnose and fucose, were therefore preferentially oxidised by the periodate treatment.The grassland soils generally had higher carbohydrate contents than the arable soils and initially had a greater degree of aggregation. However, periodate oxidation affected each soil in its own characteristic manner. A significant inverse linear relationship between the degree of disruption and the residual sugar content was found with 13 of the 15 soils. Over the range measured aggregate stability was therefore related to the presence of carbohydrate predominantly from microbial sources.     

Facultative Anaerobe Caldibacillus debilis GB1: Characterization and Use in a Designed Aerotolerant,Cellulose-Degrading Coculture with Clostridium thermocellum

Development of a designed coculture that can achieve aerotolerant ethanogenic biofuel production from cellulose can reduce the costs of maintaining anaerobic conditions during industrial consolidated bioprocessing (CBP). To this end, a strain of Caldibacillus debilis isolated from an air-tolerant cellulolytic consortium which included a Clostridium thermocellum strain was characterized and compared with the C. debilis type strain. Characterization of isolate C. debilis GB1 and comparisons with the type strain of C. debilis revealed significant physiological differences, including (i) the absence of anaerobic metabolism in the type strain and (ii) different end product synthesis profiles under the experimental conditions used. The designed cocultures displayed unique responses to oxidative conditions, including an increase in lactate production. We show here that when the two species were cultured together, the noncellulolytic facultative anaerobe C. debilis GB1 provided respiratory protection for C. thermocellum, allowing the synergistic utilization of cellulose even under an aerobic atmosphere.     

Description of a cryptic thermophilic (pro)phage,CBP1 from Caldibacillus debilis strain GB1

Extremophiles - This study characterizes a cryptic (pro)phage-related sequence within the Caldibacillus debilis GB1 genome, designated CBP1.CBP1 is a Siphoviridae-like genome highly related to...     

Influence of conservation reserve program mid-contract management and landscape composition on northern bobwhite in tall fescue monocultures

The United States Department of Agriculture (USDA) authorized mid-contract management (MCM) in 2004 to restore and maintain plant species composition and structural diversity in aging Conservation Reserve Program (CRP) fields for the northern bobwhite (Colinus virginianus) and other grassland-dependent wildlife. We implemented 3 USDA-approved MCM regimes (i.e., strip disking, strip glyphosate spraying, and strip glyphosate spraying in combination with legume interseeding) in 60 tall fescue (Festuca arundinaceae) CRP monocultures in south-central Illinois, USA, during 2005–2008. We hypothesized that adult bobwhite relative densities and brood presence would increase following MCM that effectively restored early successional plant communities in otherwise monotypic stands of tall fescue. We estimated annual adult bobwhite relative densities and brood presence-absence in managed and unmanaged CRP. We modeled vegetation characteristics and landscape composition to identify factors influencing adult densities and brood presence. Adult relative densities were 2-fold greater in managed fields than in unmanaged fields, and were negatively correlated with greater percentages of grass cover. Adult densities were positively correlated with greater plant species diversity, and greater percentages of bare ground and legume cover. Logistic regression and odds ratio estimates indicated that fields managed with glyphosate-interseed and glyphosate treatments were 39.6% more likely to have broods than unmanaged CRP, whereas disked fields were 10.0% more likely than unmanaged CRP. These models indicated that the probability of brood presence was greater in fields with increased percentage of bare ground, greater plant species diversity, and decreased percentage of grass and litter cover. These findings suggest that a 3-year rotation of glyphosate or glyphosate-interseed treatments can enhance habitat conditions for adult bobwhites and broods in CRP tall fescue monocultures. © 2011 The Wildlife Society.