Impact of Ice Ages on the genetic structure of trees and shrubs

Data on the genetic structure of tree and shrub populations on the continental scale have accumulated dramatically over the past decade. However, our ability to make inferences on the impact of the last ice age still depends crucially on the availability of informative palaeoecological data. This is well illustrated by the results from a recent project, during which new pollen fossil maps were established and the variation in chloroplast DNA was studied in 22 European species of trees and shrubs. Species exhibit very different levels of genetic variation between and within populations, and obviously went through very different histories after Ice Ages. However, when palaeoecological data are non-informative, inferences on past history are difficult to draw from entirely genetic data. On the other hand, as illustrated by a study in ponderosa pine, when we can infer the species' history with some certainty, coalescent simulations can be used and new hypotheses can be tested.     

Females as intraguild predators of males in cross-pairing experiments with phytoseiid mites

Studies on intraguild interactions between phytoseiid species have shown that intraguild predation occurs and is most commonly manifested as adult females of one species feeding on juveniles of another. Whether such intraguild interactions can also occur between adult females of one species and adult males of another, is not known. Herein, we report on intraguild interactions between adults of the two sexes in cross-pairing experiments involving three related phytoseiid species (Neoseiulus paspalivorus, N. baraki and N. neobaraki) that are potential candidates for controlling the coconut mite Aceria guerreronis, a serious pest of coconut palms in tropical countries. For comparative reasons, the experiments were repeated with larvae instead of males, and with only males or only females of two different species together. In the presence of an ample supply of prey, females of N. neobaraki never fed on individuals of their own species, yet appeared to be very aggressive against males, as well as larvae of the other two phytoseiid species. They also fed on females of N. paspalivorus, but rarely on females of N. baraki. Males of N. neobaraki did not suffer mortality when together with females of either of the two other phytoseiid species. Males of N. baraki did not suffer predation from females of N. paspalivorus, but males of N. paspalivorus suffered some mortality (15 %) from N. baraki females. Larvae of each of the three species were vulnerable to intraguild predation by heterospecific adult females, except for N. neobaraki larvae when together with N. baraki females. The absence or presence of intraguild predation is largely explained by the size ratios of the individuals that were put together: large individuals feed on smaller ones, but never the reverse. For each sex, size declines in the following order: N. neobaraki > N. baraki > N. paspalivorus. Moreover, for each species, females are larger than males and males are larger than larvae. Strikingly, however, females did not kill males and larvae of their own species. We propose that niche competition between related phytoseiid species is not only determined by intraguild predation on heterospecific larvae, but also by imposing great mortality on males from the intraguild prey because phytoseiid females being pseudo-arrhenotokous require insemination to produce offspring of both sexes.     

3′-Deoxy-3′-Hydroxyamino-β-D-Xylofuranosyluracil and Derivatives Thereof

Abstract

The title compound was prepared by reduction of the oxime of the 3′-ketouridine. Condensation with aldehydes gave a series of nitrones whose reduction afforded “second generation” hydroxylamines, some of which showing antiviral activity. The nitroxide free radicals formed upon oxidation of hydroxylamines gave good e.s.r. spectra useful for configurational and conformational assignments.     

Novel Types of N6,2′-Cyclonucleosides

Abstract

Upon oxidation followed by treatment with hydroxylamine, the 3′,5′-diblocked uridine 1 gave the expected oxime 2 together with the N⁶,2′.cyclonucleoside 3 formed by nucleophilic attack of hydroxylamine at both C-6 and C-2′ positions. Reduction of 2 took place predominantly from the α face and the major D-arabino compound obtained gave the cyclonucleosides, 7 via Michael type addition. The structures of the novel cyclonucleosides, particularly their configuration at C-6 were established by X-ray diffraction.     

Detection of Streptococcus pneumoniae and Haemophilus influenzae Type B by Real-Time PCR from Dried Blood Spot Samples among Children with Pneumonia: A Useful Approach for Developing Countries

Background

Dried blood spot (DBS) is a reliable blood collection method for storing samples at room temperature and easily transporting them. We have previously validated a Real-Time PCR for detection of Streptococcus pneumoniae in DBS. The objective of this study was to apply this methodology for the diagnosis of S. pneumoniae and Haemophilus influenzae b (Hib) in DBS samples of children with pneumonia admitted to two hospitals in Mozambique and Morocco.

Methods

Ply and wzg genes of S. pneumoniae and bexA gene of Hib, were used as targets of Real-Time PCR. 329 DBS samples of children hospitalized with clinical diagnosis of pneumonia were tested.

Results

Real-Time PCR in DBS allowed for a significant increase in microbiological diagnosis of S. pneumoniae and Hib. When performing blood bacterial culture, only ten isolates of S. pneumoniae and none of Hib were detected (3·0% positivity rate, IC95% 1·4-5·5%). Real-Time PCR from DBS samples increased the detection yield by 4x fold, as 30 S. pneumoniae and 11 Hib cases were detected (12·4% positivity rate, IC95% 9·0-16·5%; P<0·001).

Conclusion

Real-Time PCR applied in DBS may be a valuable tool for improving diagnosis and surveillance of pneumonia caused by S. pneumoniae or Hib in developing countries.     

A generating model of realistic synthetic heart sounds for performance assessment of phonocardiogram processing algorithms

A new model which is capable of generating realistic synthetic phonocardiogram (PCG) signals is introduced based on three coupled ordinary differential equations. The new PCG model takes into account the respiratory frequency, the heart rate variability and the time splitting of first and second heart sounds. This time splitting occurs with each cardiac cycle and varies with inhalation and exhalation. Clinical PCG statistics and the close temporal relationship between events in ECG and PCG are used to deduce values of PCG model parameters.In comparison with published PCG models, the proposed model allows a larger number of known PCG features to be taken into consideration. Moreover it is able to generate both normal and abnormal realistic synthetic heart sounds. Results show that these synthetic PCG signals have the closest features to those of a conventional heart sound in both time and frequency domains. Additionally, a sound quality test carried out by eight cardiologists demonstrates that the proposed model outperforms the existing models.This new PCG model is promising and useful in assessing signal processing techniques which are developed to help clinical diagnosis based on PCG.