番鸭呼肠孤病毒YB株σB蛋白的基因序列分析及其原核表达

番鸭呼肠孤病毒(Muscovy duck reovirus,DRV)是造成雏番鸭高死亡率的重要病原体,深入其检测与免疫研究对于防控DRV感染意义重大。利用RT-PCR和测序技术,对3株福建DRV分离株的S3基因进行序列分析,发现DRV-YH、YJL株与禽呼肠孤病毒(Avian reovirus,ARV)遗传距离较近,同源性高达94.6%～98.9%,而DRV-YB株与ARV同源性仅为60.6%～61.7%。构建和鉴定DRV YB株重组原核表达质粒pET-30a-S3,并转化大肠杆菌BL21,SDS-PAGE表明,表达的目的蛋白分子量约为42ku,IPTG最适诱导浓度为0.1mM,最适诱导时间为5h,最适诱导温度为37℃,以包涵体形式存在。薄层扫描显示重组DRVσB蛋白占菌体总量的67.7%。以Ni 2+柱亲和层析纯化蛋白,纯化后的目的蛋白纯度为93%,质量浓度为0.86g/L。Western blot分析该融合蛋白能与抗DRV阳性血清发生特异性反应,表明重组DRVσB蛋白具有良好的免疫反应性。     

ku70 and ku80 null mutants improve the gene targeting frequency in Monascus ruber M7

Normally, gene targeting by homologous recombination occurs rarely during a transformation process since non-homologous recombination is predominant in filamentous fungi. In our previous researches, the average gene replacement frequency (GRF) in Monascus ruber M7 was as low as 15 %. To develop a highly efficient gene targeting system for M. ruber M7, two M. ruber M7 null mutants of ku70 (MrΔku70) and ku80 (MrΔku80) were constructed which had no apparent defects in the development including vegetative growth, colony phenotype, microscopic morphology and spore yield compared with M. ruber M7. In addition, the production of some significant secondary metabolites such as pigments and citrinin had no differences between the two disruptants and the wild-type strain. Further results revealed that the GRFs of triA (encoding a putative acetyltransferase) were 42.2 % and 61.5 % in the MrΔku70 and MrΔku80 strains, respectively, while it was only about 20 % in M. ruber M7. Furthermore, GRFs of these two disruptants at other loci (the pigE, fmdS genes in MrΔku70 and the ku70 gene in MrΔku80) were investigated, and the results indicated that GRFs in the MrΔku70 strain and the MrΔku80 strain were doubled and tripled compared with that in M. ruber M7, respectively. Therefore, the ku70 and ku80 null mutants of M. ruber M7, especially the ku80-deleted strain, will be excellent hosts for efficient gene targeting.     

Recombinant Bacillus thuringiensis strain shows high insecticidal activity against Plutella xylostella and Leptinotarsa decemlineata without affecting nontarget species in the field

Aims: To construct a recombinant Bacillus thuringiensis (Bt) strain with broad insecticidal spectrum and investigate its impact on nontarget organisms in field. Method and Results: The cry-type gene of wild Bt strain UV17 was identified and a novel cry1Ba gene was cloned. The cry3Aa7 gene, which was highly toxic to coleopteran pests, was introduced into UV17, and a recombinant strain designated as UV173A was obtained. Bioassay results showed that UV173A was not only highly toxic against Plutella xylostella (50% lethal concentration [LC₅₀] = 18·03 μg ml^–1), but also against coleopteran Leptinotarsa decernlineata (LC₅₀ = 0·19 mg ml^–1). The recombinant strain was then tested in field trials to monitor its spatial variation of population and to investigate the impact on nontarget invertebrates. Conclusions: A recombinant Bt stain UV173A with broad insecticidal spectrum was obtained, and it did not cause adverse effects on the population of nontarget organisms. Significance and Impact of the Study: The results obtained here indicated that cry1Ba3 gene may be useful for the resistance management of P. xylostella, and the recombinant stain UV173A was potential for field application against some crucifer vegetable pests as well as L. decemlineata.     

基因工程抗体研究进展

随着对分子生物学研究和抗体分子结构功能的深入研究,利用细胞工程和遗传工程对抗体分子进行改建并赋予其新的功能,进而开发了新的抗体应用领域,使单克隆抗体技术又向前发展了一步.基因工程抗体是按人类设计所重新组装的新型抗体分子,可保留或增加天然抗体的特异性和主要生物学活性,去除或减少无关结构,从而可克服单克隆抗体在临床应用方面的缺陷.     

地上部植食者褐飞虱对不同水稻品种土壤线虫群落的影响

地上和地下部生物群落的交互作用对于调控陆地生态过程具有重要作用。在盆栽条件下利用2×2析因设计研究了褐飞虱(Nilaparvata lugens)取食不同水稻品种后对土壤线虫群落的影响。结果表明, 褐飞虱侵害水稻9 d后, 感虫品种(广四和汕优63)的土壤线虫总数、属数及自生线虫(食细菌线虫、食真菌线虫和捕食性线虫)数量增加, 并且一般达到显著水平(P<0.05); 而上述指标在抗虫品种(汕优559和IR36)土壤中则呈现相反的趋势。植食性线虫数量在强感虫品种广四上显著增加(P<0.05), 而在强抗虫品种IR36上显著减少(P<0.05)。褐飞虱和水稻品种对土壤线虫的生态指数(线虫通道指数、Shannon-Wiener指数、成熟度指数、富集指数和结构指数)没有明显影响, 可能与供试土壤线虫群落组成单一及褐飞虱作用时间较短有关。总之, 褐飞虱强烈影响土壤线虫数量、群落组成和营养结构, 并且作用的方向(促进或抑制)和程度依赖于水稻的品种特性, 揭示出地上部植食者的短期侵害将对稻田土壤生态系统的结构和功能产生深远影响。     

罗伦隐球酵母胞外多糖的研究 Ⅰ.发酵条件

研究了罗伦隐球酵母(cryptococcus laurentii)产生胞外多糖的适宜条件。培养基组成(g/L):葡萄糖80.00,酵母膏1.25,KH_2PO_3.00,MgSO_4·7H_2O0.05,CaCO_3 10.00,pH6.0。在30℃,旋转式摇床(200r/min)上培养6天。胞外多糖产量最高可达17.38g/L,对底物的转化率为21.725％。     

钻地风挥发油化学成分及抗炎活性的研究

为了研究钻地风挥发油的化学成分及其抗炎药效,我们采用水蒸气蒸馏法提取钻地风挥发油并用气相色谱-质谱(GC-MS)技术分析,分别用佛波酯醇(PMA)或二甲苯(xylene)诱导小鼠耳肿胀,在致炎部位外涂钻地风挥发油以观察疗效.从钻地风挥发油中分离并鉴定了24个组分,占总峰面积含量的96.01%,主要由萜类、芳香羟类成分构成,分别为(E)-1,2-亚甲二氧基-4-丙烯基-苯(23.47%),桉树脑(11.503%),芳樟醇(9.558%),β-松油醇(9.201%),α-蒎烯(7.185%)等,实验显示钻地风挥发油外用可以显著抑制佛波酯醇或二甲苯诱导的小鼠耳肿胀.     

A comparison of nonlethal sampling methods for amphibian gut microbiome analyses

Noninvasive sampling methods for studying intestinal microbiomes are widely applied in studies of endangered species and in those conducting temporal monitoring during manipulative experiments. Although existing studies show that noninvasive sampling methods among different taxa vary in their accuracy, no studies have yet been published comparing nonlethal sampling methods in adult amphibians. In this study, we compare microbiomes from two noninvasive sample types (faeces and cloacal swabs) to that of the large intestine in adult cane toads, Rhinella marina. We use 16S rRNA gene sequencing to investigate how microbial communities change along the digestive tract and which nonlethal sampling method better represents large intestinal microbiota. We found that cane toads' intestinal microbiota was dominated by Bacteroidetes, Proteobacteria and Firmicutes and, interestingly, we also saw a high proportion of Fusobacteria, which has previously been associated with marine species and changes in frog immunity. The large and small intestine of cane toads had a similar microbial composition, but the large intestine showed higher diversity. Our results indicate that cloacal swabs were more similar to large intestine samples than were faecal samples, and small intestine samples were significantly different from both nonlethal sample types. Our study provides valuable information for future investigations of the cane toad gut microbiome and validates the use of cloacal swabs as a nonlethal method to study changes in the large intestine microbiome. These data provide insights for future studies requiring nonlethal sampling of amphibian gut microbiota.     

Disease-driven detection of differential inherited SNP modules from SNP network

Detection of the synergetic effects between variants, such as single-nucleotide polymorphisms (SNPs), is crucial for understanding the genetic characters of complex diseases. Here, we proposed a two-step approach to detect differentially inherited SNP modules (synergetic SNP units) from a SNP network. First, SNP-SNP interactions are identified based on prior biological knowledge, such as their adjacency on the chromosome or degree of relatedness between the functional relationships of their genes. These interactions form SNP networks. Second, disease-risk SNP modules (or sub-networks) are prioritised by their differentially inherited properties in IBD (Identity by Descent) profiles of affected and unaffected sibpairs. The search process is driven by the disease information and follows the structure of a SNP network. Simulation studies have indicated that this approach achieves high accuracy and a low false-positive rate in the identification of known disease-susceptible SNPs. Applying this method to an alcoholism dataset, we found that flexible patterns of susceptible SNP combinations do play a role in complex diseases, and some known genes were detected through these risk SNP modules. One example is GRM7, a known alcoholism gene successfully detected by a SNP module comprised of two SNPs, but neither of the two SNPs was significantly associated with the disease in single-locus analysis. These identified genes are also enriched in some pathways associated with alcoholism, including the calcium signalling pathway, axon guidance and neuroactive ligand-receptor interaction. The integration of network biology and genetic analysis provides putative functional bridges between genetic variants and candidate genes or pathways, thereby providing new insight into the aetiology of complex diseases.