Fingerprinting trifoliate orange germ plasm accessions with isozymes, RFLPs, and inter-simple sequence repeat markers

 Trifoliate orange [Poncirus trifoliata (L.) Raf.] is frequently used as a parent in citrus rootstock breeding, but the origin and amount of genetic diversity in germ plasm collections are poorly understood. Most accessions are self-compatible, but produce a mixture of sexual and apomictic seedlings. Variation among 48 vegetatively propagated trifoliate orange accessions was assessed at seven isozyme loci, together with the restriction fragment length polymorphisms (RFLPs) detected by 38 probe-enzyme combinations and the inter-simple sequence repeat (ISSR) markers generated by 11 primers. Isozymes and RFLPs detected few polymorphisms among accessions, although genetic analysis has shown that the common phenotype is heterozygous for four isozyme and at least four RFLP loci. ISSR amplification generated multiple banding profiles with an average of 58 fragments/primer/accession. These fragments were repeatable across DNA samples extracted from different trees of the same accession or extracted at different times, and across separate PCR runs. Seventeen unique marker phenotypes were identified. The 48 trifoliate orange accessions were classified into four major groups based on polymorphic ISSR markers. All large-flowered accessions are in group 4, while small-flowered accessions are in group 3. Many ISSR markers segregated in progeny derived by open-pollination (probably mostly selfing) of a common accession, indicating that these ISSR markers are also heterozygous. Accessions having identical genotypes for a large number of heterozygous markers are unlikely to have diverged by recombination. Thus the limited divergence we detected among most accessions most likely originated by mutation. ‘Monoembryonic’ and ‘Simmons’ differed from other accessions only in the loss of specific markers, indicating that they originated as zygotic seedlings of individuals similar to the common genotype. Three accessions recently introduced from China have relatively different fingerprints with 3–14 unique ISSR markers, and probably represent a much more divergent germ plasm that may be a valuable breeding resource. Received: 8 August 1996 / Accepted: 21 March 1997     

高光谱技术——生态学领域研究的新方法

高光谱技术是一种新的地物探测技术,该技术以其敏锐的地物光谱特征探测能力为精准识别地物属性提供了强有力的手段,在生态系统过程与属性研究中具有广阔的应用前景。该文以可见光-近红外光谱分析技术为例概述了高光谱技术的原理、特点与优势,以及高光谱技术分析的流程;总结并归纳了其在土壤、植物生理、农产品品质检测、凋落物分解方面的研究应用,指出高光谱技术与遥感成像技术结合在生态监测研究中的优势;归纳了高光谱技术应用中面临的问题,并希望高光谱技术在生态学领域研究中得到更广泛的应用。     

中药山豆根的研究进展

本文对中药山豆根进行了本草考证,并概括总结了半个世纪以来国内外对山豆根(广豆根)和北豆根在生药学研究、化学成分、药理作用与临床应用等方面的研究成果,为山豆根的进一步研究提供参考。全文附参考文献105篇。     

全雌系苦瓜ACC氧化酶基因cDNA克隆及序列分析

为研究1-氨基环丙烷-1-羧酸氧化酶(ACC氧化酶,ACO)基因在苦瓜性别分化中的作用,以全雌系苦瓜‘X-Hei-d-d’花蕾为试材,采用RT-PCR和RACE技术获得了ACC氧化酶基因(Mc-ACO1)的全长cDNA序列。该序列为1 137 bp(GenBank登录号:FJ459813),其完整开放阅读框长1 005 bp,编码334个氨基酸,预测分子量为37.30 kD,肽链N端缺失ACOs家族典型的1个保守区和2个保守二价铁离子/抗坏血酸依赖型双加氧酶氨基酸残基。序列分析表明,植物ACO基因的演化与其来源植物亲缘关系的一致性较高;与其他物种相比,苦瓜Mc-ACO1不同的氨基酸序列主要表现在肽链N端;苦瓜Mc-ACO1应属于黄瓜Cs-ACO2类成员,功能可能与性别分化相关。     

Passive protective effect of egg-yolk antibodies against enterotoxigenic Escherichia coli K88+ infection in neonatal and early-weaned piglets

The protective effects of egg-yolk antibodies obtained from hens immunized with fimbrial antigens from a local strain (Escherichia coli K88+ MB, Manitoba, Canada) of K88+ piliated enterotoxigenic E. coli (ETEC) were evaluated in 3- and 21-day-old piglets in which ETEC diarrhea was induced and also in early-weaned piglets in a commercial farm. The results demonstrated that the E. coli K88+ MB-induced diarrhea in 3-day-old piglets was cured 24 h after treating with egg-yolk antibodies while those treated with egg-yolk powder from conventional hens continued to have diarrhea and 62.5% of them died of severe diarrhea. For 21-day-old weaned piglets, those fed egg-yolk antibodies had transient diarrhea, positive body weight gains and 100% survival during the period of the experiment, whereas control piglets that were treated with placebo had severe diarrhea and dehydration and some died within 48 h after infection. In the field trial, the incidence and severity of diarrhea of 14-18-day-old weaned piglets fed egg-yolk antibodies were much lower than in those fed a commercial diet containing an antibiotic. These results indicate that the neonatal and early-weaned piglets that received the egg-yolk antibodies were protected against ETEC infection.     

Lipidomic changes during different growth stages of Nitzschia closterium f. minutissima

Ultra Performance Liquid Chromatography-Electrospray ionization-Quadrupole-Time of Flight Mass Spectrometry (UPLC-ESI-Q-TOF–MS) is a powerful lipidomic tool. In this study, we developed a UPLC/Q-TOF–MS based method to investigate the lipid metabolomic changes in different growth phases of Nitzschia closterium f. minutissima. The data classification and biomarker selection were carried out by using multivariate statistical analysis, including principal components analysis (PCA), projection to latent structures with discriminant analysis (PLS-DA), and orthogonal projection to latent structures with discriminant analysis (OPLS-DA). We discovered that the intercellular lipid metabolites were significantly different among exponential, early stationary and late stationary phases. Thirty-one lipid molecules were selected and identified as putative biomarkers, including free fatty acid, Harderoporphyrin, phosphatidylglycerol, 1,2-diacyglycerl-3-O-4′-(N,N-trimethy)-homoserine, triacylglycerol, cholesterol, sulfoquinovosyldiacylglycerol, lyso-sulfoquinovosyldiacylglycerol, monogalactosyldiacylglycerol, digalactosyldiacylglycerol and lyso-digalactosyldiacylglycerol. These lipids have been shown previously to function in energy storage, membrane stability and photosynthesis efficiency during the growth of diatoms. Further analysis on the putative biomarkers demonstrated that nitrate starvation played critical role in the transition from exponential phase to stationary phase in N. closterium. This study is the first one to explore the lipidomic changes of microalgae in different growth phases, which promotes better understanding of their physiology and ecology.     

单室微生物电解池除镍途径分析及微生物群落动态特征北大核心CSCD

【目的】为探究UASB颗粒污泥启动的单室微生物电解池(Single-chamber microbial electrolysis cell,SMEC)对Ni(II)的去除途径和SMEC中微生物群落的动态特征。【方法】以乙酸钠为底物,采用单因子控制方法分析SMEC对Ni(II)的去除途径和应用Illumina高通量测序技术解析SMEC启动过程中微生物群落的组成和结构动态学特征。【结果】结果表明,SMEC对重金属的去除主要通过吸附和微生物作用。经培养驯化功能菌群发生变化。成熟单室微生物燃料电池(Single-chamber microbial fuel cell,SMFC)阳极生物膜菌群主要是Proteobacteria(变形菌门,91.42%)中的Geobacter sp.(地杆菌属,76.25%);阴极生物膜菌群主要是Bacteroidetes(拟杆菌门,47.99%)中的Niabella sp.(布鲁氏菌属,33.01%)和Proteobacteria(45.74%)中的Ochrobactrum sp.(苍白杆菌属,10.80%)。成熟SMFC改装成的SMEC在12.5 mg-Ni(II)/L下,阳极生物膜菌群由单一优势菌Geobacter sp.转变为Geobacter sp.(41.56%)和Proteobacteria中的Azospirillum sp.(固氮螺菌属,5.97%);阴极生物膜菌群由Niabella sp.和Ochrobactrum sp.转变为Firmicutes(厚壁菌门,25.21%)中的Acetoanaerobium sp.(19.28%)、Proteobacteria(51.42%)中的Dokdonella sp.(16.48%)和Azospirillum sp.(9.49%)。【结论】本研究表明,污泥微生物经SMFC和SMEC驯化过程及Ni(II)的淘汰和选择,在电极上形成了稳定、高效产电与除镍菌群,优势菌群为Proteobacteria。     

无花果叶共生菌发酵的菌种富集及抑菌活性的筛选

目的从无花果叶中分离和筛选能发酵分解无花果叶及具有抑菌作用的共生菌。方法采用以无花果叶作为唯一碳源的富集培养方法,分离共生菌并分析发酵菌群的构成。同时,通过研磨法直接分离无花果叶内生菌,对分离菌株进行分子生物学鉴定,利用平板滤纸片法进行菌株的抑菌活性分析。结果无花果叶发酵菌群由11种22株细菌构成,其中优势菌为短波单胞菌(Brevundimonas naejangsanensis)、嗜温鞘氨醇杆菌(Sphingobacterium thalpophilum)和副球菌(Paracoccus sp.)。没有获得发酵无花果叶的真菌菌群,只分离出1株产黄青霉菌(Penicillium chrysogenum)。直接分离共获得无花果叶内生细菌8种14株和内生真菌3种9株。抑菌试验表明,来源于富集培养的泡囊短波单胞菌(Brevundimonas vesicularis)和产黄青霉菌以及来源于内生菌的枯草芽胞杆菌(Bacillus subtilis)对枯草芽胞杆菌、大肠埃希菌和金黄色葡萄球菌3种指示菌有不同的抑菌作用,且它们的抑菌谱各不相同。泡囊短波单胞菌只在无花果叶中培养时才表现出抑菌活性。结论短波单胞菌可能与无花果叶的发酵分解有关,泡囊短波单胞菌与无花果叶之间发生了相互作用,因此,这2株菌可以作为无花果叶发酵的候选菌种应用。