Low Divergence of Clonorchis sinensis in China Based on Multilocus Analysis

Clonorchis sinensis, an ancient parasite that infects a number of piscivorous mammals, attracts significant public health interest due to zoonotic exposure risks in Asia. The available studies are insufficient to reflect the prevalence, geographic distribution, and intraspecific genetic diversity of C. sinensis in endemic areas. Here, a multilocus analysis based on eight genes (ITS1, act, tub, ef-1a, cox1, cox3, nad4 and nad5 [4.986 kb]) was employed to explore the intra-species genetic construction of C. sinensis in China. Two hundred and fifty-six C. sinensis isolates were obtained from environmental reservoirs from 17 provinces of China. A total of 254 recognized Multilocus Types (MSTs) showed high diversity among these isolates using multilocus analysis. The comparison analysis of nuclear and mitochondrial phylogeny supports separate clusters in a nuclear dendrogram. Genetic differentiation analysis of three clusters (A, B, and C) showed low divergence within populations. Most isolates from clusters B and C are geographically limited to central China, while cluster A is extraordinarily genetically diverse. Further genetic analyses between different geographic distributions, water bodies and hosts support the low population divergence. The latter haplotype analyses were consistent with the phylogenetic and genetic differentiation results. A recombination network based on concatenated sequences showed a concentrated linkage recombination population in cox1, cox3, nad4 and nad5, with spatial structuring in ITS1. Coupled with the history record and archaeological evidence of C. sinensis infection in mummified desiccated feces, these data point to an ancient origin of C. sinensis in China. In conclusion, we present a likely phylogenetic structure of the C. sinensis population in mainland China, highlighting its possible tendency for biogeographic expansion. Meanwhile, ITS1 was found to be an effective marker for tracking C. sinensis infection worldwide. Thus, the present study improves our understanding of the global epidemiology and evolution of C. sinensis.     

Structural and Functional Insights into Saccharomyces cerevisiae Riboflavin Biosynthesis Reductase RIB7

Saccharomyces cerevisiae RIB7 (ScRIB7) is a potent target for anti-fungal agents because of its involvement in the riboflavin biosynthesis pathway as a NADPH-dependent reductase. However, the catalytic mechanism of riboflavin biosynthesis reductase (RBSRs) is controversial, and enzyme structure information is still lacking in eukaryotes. Here we report the crystal structure of Saccharomyces cerevisiae RIB7 at 2.10 Å resolution and its complex with NADPH at 2.35 Å resolution. ScRIB7 exists as a stable homodimer, and each subunit consists of nine central β-sheets flanked by five helices, resembling the structure of RIB7 homologues. A conserved G⁷⁶-X-G⁷⁸-X_n-G¹⁸¹-G¹⁸² motif is present at the NADPH pyrophosphate group binding site. Activity assays confirmed the necessity of Thr79, Asp83, Glu180 and Gly182 for the activity of ScRIB7. Substrate preference of ScRIB7 was altered by mutating one residue (Thr35) to a Lysine, implying that ScRIB7 Thr35 and its corresponding residue, a lysine in bacteria, are important in substrate-specific recognition.     

Morpho-anatomical and physiological responses to waterlogging stress in different barley (<Emphasis Type=Italic>Hordeum vulgare</Emphasis> L.) genotypes

Waterlogging is one of the major stresses limiting crop production worldwide. The understanding of the mechanisms of plant adaptations to waterlogging stress helps improve plant tolerance to stress. In this study, physiological responses and morpho-anatomical adaptations of seven different barley genotypes were investigated under waterlogging stress. The results showed that the waterlogging-tolerant varieties (TX9425, Yerong, TF58) showed less reduction in plant height, SPAD (soil–plant analyses development analyses) value, tillers, shoot and root biomasses than did the waterlogging-sensitive varieties (Franklin, Naso Nijo, TF57). Under waterlogging stress condition, the tolerant genotypes also showed a much larger number of adventitious roots than did the sensitive genotypes. More intercellular spaces and better integrated chloroplast membrane structures were observed in the leaves of the waterlogging-tolerant cultivars, which is likely due to increased ethylene content, decreased ABA content and less accumulation of O₂^.?. The ability to form new adventitious roots and intercellular spaces in shoots can also be used as selection criteria in breeding barley for waterlogging tolerance.     

Improved production of citric acid by Yarrowia lipolytica using oleic acid as the oxygen‐vector and co‐substrate

Yarrowia lipolytica is able to secrete large amounts of citric acid (CA), which is greatly affected by the dissolved oxygen concentration (DOC) in the fermentation medium. In this study, oleic acid was selected as oxygen‐vector to improve DOC during CA fermentation. When 2% (v/v) of oleic acid was added to the culture broth, higher DOC (>42.1%) was determined throughout the CA synthesis phase. The yield of CA reached a maximum of 32.1 g/L (25.4% higher than the control) and the biomass was 8.8 g/L. The substrate uptake rate, products formation rate and key enzyme activities were also determined, and the results indicated that CA synthesis was strengthened with oleic acid addition. Furthermore, it was detected that oleic acid could be assimilated by the cells, which means that oleic acid could be served both as oxygen‐vector and co‐substrate for CA synthesis by Y. lipolytica. In a bioreactor with working volume of 3 L, the highest concentration of CA reached to 36. 4 g/L in the presence of 2% (v/v) oleic acid after 192 h of fermentation. These results confirmed that oleic acid could be applied in the large‐scale production of CA by Y. lipolytica.     

Highly Efficient Materials Assembly Via Electrophoretic Deposition for Electrochemical Energy Conversion and Storage Devices

Featuring pronounced controllability, versatility, and scalability, electrophoretic deposition (EPD) has been proposed as an efficient method for film assembly and electrode/solid electrolyte fabrication in various energy storage/conversion devices including rechargeable batteries, supercapacitors, and fuel cells. High‐quality electrodes and solid electrolytes have been prepared through EPD and exhibit advantageous performances in comparison with those realized with traditional methods. Recent advances in the application of EPD materials in electrochemical energy storage and conversion devices are summarized. In particular, the parameters that influence the efficiency of an EPD process from colloidal preparation to deposition are evaluated with the aim to provide insightful guidance for realizing high‐performance electrochemical energy conversion materials and devices.     

分离自甘肃天祝五台岭土壤的放线菌拮抗性的初步研究

从甘肃天祝县土壤中分离到的27株放线菌,作为测试放线菌拮抗性的供试茵株.抗菌试验表明,14株放线菌对6株革兰氏阳性菌和阴性菌以及白色念殊菌等指示菌有抗性.菌株WTL-4、WTL-20和WTL-26抗菌谱最广,WTL-4能抗3种革兰氏阳性菌,WTL-20能抗革兰氏阳性的金黄色葡萄球菌和单增李斯特菌、革兰氏阴性的沙门氏菌及真菌白色念殊菌,WTL-26能抗革兰氏阳性的金黄色葡萄球菌和单增李斯特菌及革兰氏阴性的沙门氏菌.抗肿瘤试验表明,有8株菌株对肿瘤细胞有抑制作用,其中抑制率在60%以上的菌株占18.5%.对抗肿瘤活性较高的3株菌WTL-4、WTL-14和WTL-15以及没有抗菌和抗肿瘤活性的菌株WTL-27进行了系统发育分析.从系统发育树可以看出,4株菌均属于链霉菌属(Streptomyces).菌株WTL-4与Streptomyces viridochromoqenes的相似性为98%;菌株WTL-14和WTL-15的相似性达到99.2%,它们与S.flavolimosus 174457的相似性达到99.4%;WTL-27与S.mycroflavus的相似性为99%.