Heat stress in the presence of low RNA polymerase activity increases chromosome copy number of Escherichia coli

Summary A temperature shift-up accompanied by a reduction in RNA polymerase activity in Escherichia coli causes an increased rate of initiation leading to a 1.7- to 2.2-fold increase in chromosome copy number. A temperature shift-up without a reduction in polymerase activity induces only a transient non-scheduled initiation of chromosome replication caused by heat shock with no detectable effect on chromosome copy number.     

Dasyclads, cyclocrinitids and receptaculitids: comparative morphology and paleoecology

The cyclocrinitids are an extinct tribe of dasycladacean green algae. They were anatomically very similar to certain Recent dasyclads, even at early growth stages. The morphology and preservation of cyclocrinitids strongly suggest that they had a siphonous cellular organization with extracellular, aragonitic calcification; these features are characteristic of living dasyclads. The light surficial calcification of cyclocrinitids and other dasyclads had important paleoecological effects. It restricted them to low-energy waters, as it provided relatively little structural support. It also confined them to warm, tropical waters; they are good paleoequatorial indicators. The decline of these algae during the late Ordovician and early Silurian may therefore reflect the simultaneous cooling and glaciation. Receptaculitids are entirely unrelated organisms. Their meroms have several distinctive features; they are not homologous to the lateral branches of cyclocrinitids or dasyclads. Receptaculitid calcification was extensive and their thalli were apparently quite sturdy; they often occurred in reefs. Receptaculitids also lived in high-latitude, cold-water environments. Thus, they were ecologically unlike any calcareous green algae, and cannot be used as paleoequatorial indicators. Receptaculitids remain problematical, although the arrangement of meroms suggests plant affinities. □ Calcareous algae, Problematica, Dasycladales, Cyclocriniteae, Receptaculitales, morphology, classification, paleoecology, paleogeography .     

Role of methyl groups in dynamics and evolution of biomolecules

Recent studies have discovered strong differences between the dynamics of nucleic acids (RNA and DNA) and proteins, especially at low hydration and low temperatures. This difference is caused primarily by dynamics of methyl groups that are abundant in proteins, but are absent or very rare in RNA and DNA. In this paper, we present a hypothesis regarding the role of methyl groups as intrinsic plasticizers in proteins and their evolutionary selection to facilitate protein dynamics and activity. We demonstrate the profound effect methyl groups have on protein dynamics relative to nucleic acid dynamics, and note the apparent correlation of methyl group content in protein classes and their need for molecular flexibility. Moreover, we note the fastest methyl groups of some enzymes appear around dynamical centers such as hinges or active sites. Methyl groups are also of tremendous importance from a hydrophobicity/folding/entropy perspective. These significant roles, however, complement our hypothesis rather than preclude the recognition of methyl groups in the dynamics and evolution of biomolecules.     

Human Long-Latency Auditory Evoked Potentials during Radial Motion of the Sound Source

Human long-latency auditory evoked potentials were studied during simulation with variable-amplitude pulse sequences from a sound source moving to and from the subject. The N1 peak parameters were shown to depend on an accurate estimate of the direction of the change in the distance to the sound source. Differences in the processing of signals that simulated the approaching and/or distancing of the sound source were found in the N1 and P2 component parameters of on- and off-responses as was a more pronounced long negative potential shift in the evoked response to the approaching source as compared to the distancing source.     

Yeast cell mortality related to a high-pressure shift: occurrence of cell membrane permeabilization

The shrinkage of yeast cells caused by high-pressure treatment (250 MPa, 15 min) was investigated using direct microscopic observation. A viable staining method after treatment allowed the volume variation of two populations to be distinguished: an irreversible volume decrease (about 35% of the initial volume) of pressure-inactivated cells during pressure holding time, and viable cells, which were less affected. A mass transfer was then induced during high-pressure treatment. Causes of this transfer seem to be related to a pressure-induced membrane permeabilization, allowing a subsequent leakage of internal solutes, where three ions (Na+, K+ and Ca2+), plus endogenous glycerol, were verified. This glycerol leakage was found to occur after yeast pressurization in a medium having low water activity, although the yeast was not inactivated. All these observations lead to the hypothesis that pressure-induced cell permeabilization could be the cause of yeast inactivation under pressure.