Knowing something versus feeling different: the effects and non-effects of genetic ancestry on racial identity

Since the completion of the Human Genome Project, there have been pitched debates about its implications and the research it enables. One prominent thread of concern focuses on the role of post-genomic science on technically enabling and generating interest in genetic ancestry testing (GAT). Critical analyses of GAT have pointed to multiple issues, raising the alarm on consumers’ experiences with such technologies. This paper describes the results of a pilot study in which we tracked women’s experiences receiving their genetic ancestry results, and their understandings of, reactions to, and valuing of this information over time. Overwhelmingly, our participants reported a curious combination of anticipation and satisfaction yet no discernable impact on their sense of self or racial identity. We elaborate on the effects and non-effects of GAT for the women in our study, and how we make sense of their simultaneous experiences of ‘knowing something’ but not ‘feeling different.’     

On the possible role of nonreproductive traits for the evolution of unisexuality: Life‐history variation among males,females, and hermaphrodites in Opuntia robusta (Cactaceae)

In angiosperms, dioecy has arisen in 871–5,000 independent events, distributed in approximately 43% of the flowering families. The reproductive superiority of unisexuals has been the favorite explanation for the evolution of separate sexes. However, in several instances, the observed reproductive performance of unisexuals, if any, does not seem to compensate for the loss of one of the sex functions. The involvement of fitness components not directly associated with reproduction is a plausible hypothesis that has received little attention. Life‐history traits recently recognized as predictors of plant performance were compared among males, females, and hermaphrodites of a rare trioecious Opuntia robusta population in the field, using the cladode as the study unit. Cladode mortality by domestic herbivores was common and higher in females and hermaphrodites than in males. Males, females, or both displayed lower shrinkage and higher rates of survival, growth, and reproductive frequency than hermaphrodites. Unisexuals simultaneously outperformed hermaphrodites in demographic traits known to compete for common limiting resources, such as the acceleration of reproductive maturation (progenesis) and survival. A meta‐analysis combining the outcomes of each of the analyzed life‐history traits revealed a tendency of males (d₊₊ = 1.03) and females (d₊₊ = 0.93) to outperform hermaphrodites in presumably costly demographic options. Clonality is induced by human or domestic animal plant sectioning; and males and females highly exceeded hermaphrodites in their clonality potential by a factor of 8.3 and 5.3, respectively. The performances of unisexuals in the analyzed life‐history traits may enhance their reproductive potential in the long run and their clonality potential and could explain the observed increase of unisexuality in the population. Life‐history traits can be crucial for the evolution of unisexuality, but their impact appears to be habitat specific and may involve broad ontogenetic changes.     

p-Chlorophenylalanine Changes Serotonin Transporter mRNA Levels and Expression of the Gene Product

Abstract: After a single intraperitoneal injection of the irreversible tryptophan hydroxylase inhibitor p -chlorophenylalanine (PCPA; 300 mg/kg), there was a rapid down-regulation of serotonin (5-HT) transporter mRNA levels in cell bodies. This change was significant at 1 and 2 days after PCPA administration within the ventromedial but not the dorsomedial portion of the dorsal raphe nucleus. Seven days after PCPA treatment, 5-HT transporter mRNA levels were significantly elevated compared with controls in both regions of the dorsal raphe nucleus. PCPA administration produced no change in the [³H]-citalopram binding and synaptosomal [³H]5-HT uptake in terminal regions at 2 and 7 days after treatment but significantly reduced both these parameters by ∼20% in the hippocampus and in cerebral cortex 14 days after PCPA administration. The striatum showed a lower sensitivity to this effect. No significant changes were observed in the levels of [³H]citalopram binding to 5-HT cell bodies in the dorsal raphe nucleus. In the same animals used for 5-HT transporter mRNA level measurements, levels of tryptophan hydroxylase mRNA in neurons of the ventromedial and dorsomedial portions of the dorsal raphe nucleus were increased 2 days after PCPA administration and fell to control levels 7 days after injection in the ventromedial region but not in the dorsomedial portion of the dorsal raphe nucleus, where they remained significantly higher than controls. Altogether, these results show that changes in 5-HT transporter mRNA are not temporally related to changes in 5-HT transporter protein levels. In addition, our results suggest that the 5-HT transporter and tryptophan hydroxylase genes are regulated by different mechanisms. We also provide further evidence that dorsal raphe 5-HT neurons are differentially regulated by drugs, depending on their location.     

Effects of pollinia removal and insertion on flower longevity inChloraea alpina (Orchidaceae)

Summary Although it is known that stigmatic pollen deposition may trigger early flower senescence, the existence of a similar plastic response of flower lifespan to pollen removal has been much less studied. Here we report on a factorial, manipulative experiment in which all 2 × 2 flower combinations of pollinia removal and stigmatic pollinia insertion were performed in inflorescences of the Patagonian ground orchidChloraea alpina. This experiment was conducted in the laboratory, in a population of cut inflorescences and in the field. We hypothesized that if expected fitness gains, through both the male and female functions, were weighed against the costs of flower maintenance, then early flower senescence should be triggered by either pollinia removal or insertion. The shortest flower lifespan would be expected in flowers where both processes occurred. Results showed that flower longevity was very strongly affected by pollinia insertion, reducing the flower lifespan by approximately 60%. The response of pollinia removal was much weaker. A significant reduction in flower longevity caused by pollinia removal was only detected in unpollinated flowers (i.e. no pollinia inserted). Within the racemose inflorescences, flowers in basal positions lived longer than flowers in terminal ones, which might be evidence of the importance of resource availability in determining maximum flower longevity. The observed responses of flower lifespan plasticity to pollinia manipulation only partially supported our expectations based on fitness benefit—cost relationships. Other factors that might explain these discrepancies are the different fitness gains that may indeed accrue to the processes of pollinia removal and insertion as they occur in nature, donor manipulation of the recipient flower lifespan associated with the evolution of pollen clustering into pollinia and physiological constraints in terms of the extent to which flower longevity may respond to pollen removal.     

Competitive interactions among tropical intertidal limpets

The keyhole limpet, Fissurella virescens Sowerby, and the pulmonate limpet, Siphonaria gigas Sowerby, are commonly found in intertidal rocky shores along the Pacific Coast of Costa Rica. They occur from mid-low to high intertidal levels and their abundances are inversely correlated. Fissurella virescens is more abundant in the mid intertidal zone, whereas Siphonaria gigas is more abundant in the high zone. A factorial experiment was conducted to determine the effects of density on survival and weight loss of each species in order to distinguish between the effects of intra- vs. interspecific competition. The experiment was carried out in the habitat of highest density of each species. Intraspecific competition was found to be important in regulating the population density of Fissurella. Intraspecific competition did not regulate population density of Siphonaria but caused a decrease in body weight at high densities. Interspecific competition between both species was weak.     

FDA/PI flow cytometry assay of complement-mediated cytotoxicity of antibodies generated during xenotransplantation.

BACKGROUND: A flow cytometry complement-mediated cytotoxicity assay (FCCA) using fluorescein diacetate (FDA) and propidium iodide (PI) to measure antibody-dependent toxicity is useful to determine the success of xenotransplant organs. We evaluated the validity of different mathematical models as a measure of cytotoxicity in FCCA. METHODS: Sera from untreated baboons (n = 7) and from immunosuppressed animals (n = 5) undergoing different xenotransplantation protocols with pig organs were tested by endogenous FCCA and a similar assay also using exogenous complement, and the results were compared with those of a complement-dependent hemolytic assay to detect anti-pig antibodies (APHA). The influence of PI/FDA staining and the use of several mathematical models were analyzed. RESULTS: For both groups of animals, we observed high correlations between the endogenous and exogenous FCCA pathways and between calculations based on PI and FDA staining. Of the four mathematical models tested--the Von Krogh equation, two exponential models, and area under the curve--the Von Krogh equation was the most appropriate in terms of goodness of fit and concordance with APHA. CONCLUSIONS: FDA/PI FCCA is useful to measure endogenous and exogenous complement-mediated cytotoxicities, and it has advantages related to identification of potential new xenoantibodies. Although all four mathematical models produced acceptable solutions, the Von Krogh equation was the best option.     

Advancing cell wall inhibitors towards clinical applications

Natural products represent a major source of approved drugs and still play an important role in supplying chemical diversity. Consistently, 2014 has seen new, natural product-derived antibiotics approved for human use by the US Food and Drug Administration. One of the recently approved second-generation glycopeptides is dalbavancin, a semi-synthetic derivative of the natural product A40,926. This compound inhibits bacterial growth by binding to lipid intermediate II (Lipid II), a key intermediate in peptidoglycan biosynthesis. Like other recently approved antibiotics, dalbavancin has a complex history of preclinical and clinical development, with several companies contributing to different steps in different years. While our work on dalbavancin development stopped at the previous company, intriguingly our current pipeline includes two more Lipid II-binding natural products or derivatives thereof. In particular, we will focus on the properties of NAI-107 and related lantibiotics, which originated from recent screening and characterization efforts.