The genetic toxicity of human carcinogens and its implications

23 chemicals and chemical combinations have been designated by the International Agency for Research on Cancer (IARC) as causally associated with cancer in humans. The literature was searched for reports of their activity in the Salmonella mutagenicity assay and for evidence of their ability to induce chromosome aberrations or micronuclei in the bone marrow of mice or rats. In addition, the chemical structures of these carcinogens were assessed for the presence of electrophilic substituents that might be associated with their mutagenicity and carcinogenicity. The purpose of this study was to determine which human carcinogens exhibit genetic toxicity in vitro and in vivo and to what extent they can be detected using these two widely employed short-term tests for genetic toxicity. The results of this study revealed 20 of the 23 carcinogens to be active in one or both short-term tests. Treosulphan, for which short-term test results are not available, is predicted to be active based on its structure. The remaining two agents, asbestos and conjugated estrogens, are not mutagenic to Salmonella; asbestos is not likely to induce cytogenetic effects in the bone marrow and the potential activity of conjugated estrogens in the bone marrow is difficult to anticipate. These findings show that genetic toxicity is characteristic of the majority of IARC Group 1 human carcinogens. If these chemicals are considered representative of human carcinogens, then two short-term tests may serve as an effective primary screen for chemicals that present a carcinogenic hazard to humans.     

Inherited selective cobalamin malabsorption in Komondor dogs associated with a <Emphasis Type="Italic">CUBN</Emphasis> splice site variant

Background

Three Komondor dogs in a small family and 3 sporadic cases exhibited a constellation of signs that included juvenile-onset of failure-to-thrive, inappetence, vomiting and/or diarrhea, and weakness. In each we documented dyshematopoiesis, increased anion gap, methylmalonic acidemia/-uria, and serum cobalamin deficiency. Urine protein electrophoresis demonstrated excretion of cubam ligands. All clinical signs and metabolic abnormalities, except proteinuria, were reversed by regular parenteral cobalamin administration. The pattern of occurrence and findings in the disorder suggested an autosomal recessive inheritance of cobalamin malabsorption with proteinuria, a condition in humans called Imerslund-Gräsbeck syndrome. The purpose of this study was to determine the molecular cause of this disorder in Komondors.

Results

Whole genome sequencing of two affected Komondor dogs of unknown relatedness and one parent and a clinically-normal littermate of an affected dog revealed a pathogenic single-base change in the CUBN intron 55 splice donor consensus sequence (NM_001003148.1: c.8746?+?1G?>?A) that was homozygous in affected dogs and heterozygous in the unaffected parents. Alleles of the variant co-segregated with alleles of the disease locus in the entire family and all more distantly-related sporadic cases. A population study using a simple allele-specific DNA test indicated mutant allele frequencies of 8.3 and 4.5% among North American and Hungarian Komondors, respectively.

Conclusions

DNA testing can be used diagnostically in Komondors when clinical signs are suggestive of cobalamin deficiency or to inform Komondor breeders prospectively and prevent occurrence of future affected dogs. This represents the third cubilin variant causing inherited selective cobalamin malabsorption in a large animal ortholog of human Imerslund-Gräsbeck syndrome.

     

Insect feeding on cucumber mediated by rhizobacteria-induced plant resistance

Select strains of plant growth-promoting rhizobacteria (PGPR) were evaluated in greenhouse experiments with cucumber for induction of resistance against cucumber beetle (Diabrotica undecimpunctata howardi Barber) feeding and the beetle-transmitted cucurbit wilt disease. When beetles were given a choice between PGPR-treated and nontreated cucumber, their feeding on stems and cotyledons and the severity of wilt symptoms were significantly lower on PGPR-treated plants. HPLC analysis demonstrated that cotyledons from PGPR-treated plants contained significantly lower concentrations of the cucumber beetle feeding stimulant cucurbitacin than nontreated plants. These results suggest that a mechanism for PGPR-induced resistance against cucumber beetle feeding may involve a change in the metabolic pathway for cucurbitacin synthesis.     

The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy

Ionic liquids have great potential in biological applications and biocatalysis, as some ionic liquids can stabilize proteins and enhance enzyme activity, while others have the opposite effect. However, on the molecular level, probing ionic liquid interactions with proteins, especially in solutions containing high concentrations of ionic liquids, has been challenging. In the present work the ¹³C, ¹⁵N-enriched GB1 model protein was used to demonstrate applicability of high-resolution magic-angle-spinning (HR-MAS) NMR spectroscopy to investigate ionic liquid–protein interactions. Effect of an ionic liquid (1-butyl-3-methylimidazolium bromide, [C₄-mim]Br) on GB1was studied over a wide range of the ionic liquid concentrations (0.6–3.5 M, which corresponds to 10–60% v/v). Interactions between GB1 and [C₄-mim]Br were observed from changes in the chemical shifts of the protein backbone as well as the changes in ¹⁵N ps-ns dynamics and rotational correlation times. Site-specific interactions between the protein and [C₄-mim]Br were assigned using 3D methods under HR-MAS conditions. Thus, HR-MAS NMR is a viable tool that could aid in elucidation of molecular mechanisms of ionic liquid–protein interactions.     

Size-biased predation by the gila topminnow poeciliopsis occidentalis (Baird and Girard)

The objective of this study is to document under both field and laboratory conditions the phenomenon of size-biased feeding by the Gila topminnow, Poeciliopsis occidentalis, and to shed light on the mechanisms responsible for this process. Adult female Gila topminnows feed in Monkey Spring, Santa Cruz County, Arizona, on a variety of food items, but Hyalella azteca is an important element of its invertebrate diet. The size of the amphipods ingested by female topminnows is a function of the size of the fish, with larger fish taking larger prey. There is also a strong preference for topminnows to select large amphipods from within the size limits imposed by the width of the mouth.The correlation between fish size and prey size was also seen in the laboratory, utilizing Daphnia similis and food pellets as prey. The tendency to select large prey from a range of available sizes was prominent with both Daphnia and pellets. The feeding period in the laboratory is characterized by two distinct phases. During the first phase, feeding is rapid and nonselective. As the feeding progresses, the rate of feeding drops dramatically and selectivity increases.More complex laboratory feeding experiments gave equivocal results. When fish were presented pellets of two sizes at different densities and at different ratios of small to large, size biased feeding was not clearly evident. Both predator and prey densities, agonistic behavior, and reaction distance should be explored more thoroughly as next steps in attempts to mimic feeding behavior in nature.Extracted from a Ph. D. thesis written by the junior author     

Reproductive performance of the desert pupfish (Cyprinodon n. nevadensis) in relation to salinity

Synopsis The reproductive performance of the desert pupfish, Cyprinodon n. nevadensis, was tested by exposing breeding pairs to a range of salinities from 0.1 to over 40 In terms of eggs g^–1 body weight day^–1 , eggs per spawning and embryo viability. reproductive performance was optimal at 10 Performance decreased above and below 11 producing a plateau of statistically equivalent reproductive performance from 0.2 to 20 The upper salinity limit placed on reproduction is the tolerance of the eggs, since a few eggs are laid above 20but they do not hatch. These small fish probably never experience the upper salinity limit for reproduction in their native habitat. The tolerance limits for reproduction are compared with a lethal range from less than 0.1 to 53in a 96 h LD-50 test.