大鼠内细胞团和胎儿神经干细胞构建嵌合体的潜力

嵌合体大鼠是研究人类疾病的重要动物模犁.用囊胚注射法研究了大鼠内细胞团(ICM)和胎儿神经干细胞(FNS)构建嵌合体的潜力.结果发现来自黑色(DA)大鼠第5天(D5)和第6天(D6)囊胚的ICM细胞注入D5 Sprague-Dawley(SD)大鼠囊胚后得到3只嵌合体大鼠:D5 SD大鼠ICM细胞注射入D5 DA囊胚后得到4只嵌合体大鼠:而体外培养的DA或SD人鼠ICM细胞注射后均未能获得嵌合体大鼠.本研究用大鼠胎儿神经干细胞(rFNS)和LacZ转染的rFNS构建嵌介体,未能获得嵌合体人鼠:但在LacZ转染的SD rFNS注射到DA大鼠囊胚后发育来的41只胎儿中,有2只胎儿其组织切片中发现少量LacZ阳性细胞.结果表明DA和SD大鼠ICM具有参与嵌合体发育的潜力,但ICM细胞经体外培养后构建嵌合体的潜力显著F降(P＜0.05);大鼠胎儿神经干细胞构建嵌合体的潜力较低,可能仅具有参与早期胚胎发育的潜力.     

Assessment of genetic mutations in the XRCC2 coding region by high resolution melting curve analysis and the risk of differentiated thyroid carcinoma in Iran

Homologous recombination (HR) is the major pathway for repairing double strand breaks (DSBs) in eukaryotes and XRCC2 is an essential component of the HR repair machinery. To evaluate the potential role of mutations in gene repair by HR in individuals susceptible to differentiated thyroid carcinoma (DTC) we used high resolution melting (HRM) analysis, a recently introduced method for detecting mutations, to examine the entire XRCC2 coding region in an Iranian population. HRM analysis was used to screen for mutations in three XRCC2 coding regions in 50 patients and 50 controls. There was no variation in the HRM curves obtained from the analysis of exons 1 and 2 in the case and control groups. In exon 3, an Arg(188)His polymorphism (rs3218536) was detected as a new melting curve group (OR: 1.46; 95%CI: 0.432-4.969; p = 0.38) compared with the normal melting curve. We also found a new Ser(150)Arg polymorphism in exon 3 of the control group. These findings suggest that genetic variations in the XRCC2 coding region have no potential effects on susceptibility to DTC. However, further studies with larger populations are required to confirm this conclusion.     

Genome‐wide association study identifies variation of glucosidase being linked to natural variation of the maximal quantum yield of photosystem II

The maximum quantum yield of photosystem II (as reflected by variable to maximum chlorophyll a fluorescence, F_v/F_m) is regarded as one of the most important photosynthetic parameters. The genetic basis underlying natural variation in F_v/F_m, which shows low level of variations in plants under non‐stress conditions, is not easy to be exploited using the conventional gene cloning approaches. Thus, in order to answer this question, we have followed another strategy: we used genome‐wide association study (GWAS) and transgenic analysis in a rice mini‐core collection. We report here that four single‐nucleotide polymorphisms, located in the promoter region of β‐glucosidase 5 (BGlu‐5), are associated with observed variation in F_v/F_m. Indeed, our transgenic analysis showed a good correlation between BGlu‐5 and F_v/F_m. Thus, our work demonstrates the feasibility of using GWAS to study natural variation in F_v/F_m, suggesting that cis‐element polymorphism, affecting the BGlu‐5 expression level, may, indirectly, contribute to F_v/F_m variation in rice through the gibberellin signaling pathway. Further research is needed to understand the mechanism of our novel observation.     

Length–weight relationships for four Aphanius species of Iran (Teleostei: Cyprinodontidae)

Length–weight parameters are presented for four endemic tooth‐carps of the genus Aphanius from Iran.     

Whole CMV Proteome Pattern Recognition Analysis after HSCT Identifies Unique Epitope Targets Associated with the CMV Status

Cytomegalovirus (CMV) infection represents a vital complication after Hematopoietic Stem Cell Transplantation (HSCT). We screened the entire CMV proteome to visualize the humoral target epitope-focus profile in serum after HSCT. IgG profiling from four patient groups (donor and/or recipient +/− for CMV) was performed at 6, 12 and 24 months after HSCT using microarray slides containing 17174 of 15mer-peptides overlapping by 4 aa covering 214 proteins from CMV. Data were analyzed using maSigPro, PAM and the ‘exclusive recognition analysis (ERA)’ to identify unique CMV epitope responses for each patient group. The ‘exclusive recognition analysis’ of serum epitope patterns segregated best 12 months after HSCT for the D+/R+ group (versus D−/R−). Epitopes were derived from UL123 (IE1), UL99 (pp28), UL32 (pp150), this changed at 24 months to 2 strongly recognized peptides provided from UL123 and UL100. Strongly (IgG) recognized CMV targets elicited also robust cytokine production in T-cells from patients after HSCT defined by intracellular cytokine staining (IL-2, TNF, IFN and IL-17). High-content peptide microarrays allow epitope profiling of entire viral proteomes; this approach can be useful to map relevant targets for diagnostics and therapy in patients with well defined clinical endpoints. Peptide microarray analysis visualizes the breadth of B-cell immune reconstitution after HSCT and provides a useful tool to gauge immune reconstitution.     

Allopatric speciation in the desert: diversification of cichlids at their geographical and ecological range limit in Iran

Collated electrofishing data from wadeable riffles of boreal rivers in Finland revealed a substantial shift in the fish assemblage composition, accompanied by a decline in total fish density and a reduction in species richness from early summer to late autumn. As the major changes in fish assemblages, the density of cyprinids decreased sharply from June towards autumn, whereas salmonids peaked in September. These shifts were considered to originate mainly from spawning migrations, fish movements to winter refuge habitat and other temperature-related responses of rheophilic versus eurytopic fish species. Temporal change in fish assemblages induced a prominent variation in the monthly fish-based index values used for bioassessment. The proportion of sampled sites classified as high or good in ecological status within the Water Framework Directive (WFD) based on fish increased from 25.9% in July to 68.3% in October. These results, combined with the observed timing of young of the year (0+) fish recruitment to electrofishing catch, suggest that sampling of fish in boreal rivers for WFD monitoring should be restricted to a considerably shorter period than the prevailing practice in order to avoid temporal bias.     

Phylogenetic relationships and taxonomy of <Emphasis Type="Italic">Luciobarbus barbulus</Emphasis> (Heckel, 1847) (Teleostei: Cyprinidae)

Luciobarbus barbulus (Heckel, 1847), a cyprinid fish of the Persian Gulf basin is re-described. Its identity is discussed and its phylogenetic relationship among the tribe Barbini is reconstructed. Luciobarbus barbulus can be distinguished from its close species, L. pectoralis by having thicker lower lip, stronger last unbranched dorsal fin ray and with stronger serration, longer barbels and posterior barbel passes the middle of the eye (vs. not reaching the middle of the eye in L. pectoralis), confirming the identity of both, as distinct species. Moreover, phylogenetic analysis based on the mtCOI sequences, placed the sequenced L. barbulus in a distinct clade corresponding to the tribe Barbini which includes Aulopyge, Barbus and Luciobarbus (three genera from Eurasia and North of Africa), sister to L. pectoralis from Orontes River with genetic distance of 1.7% applying the Kimura 2 Parameter (K2P) model.     

Reproductive biology of the endemic Iranian cichlid, <Emphasis Type="Italic">Iranocichla hormuzensis</Emphasis> Coad, 1982 from Mehran River,southern Iran

We studied the reproductive biology of the endemic Iranian cichlid Iranocichla hormuzensis, a maternal mouthbrooder, in the Mehran River. Overall sex ratio was 1.44 M: 1F indicating a significant male bias. Monthly sex ratios did not differ from unity except in May and June when the sex ratios were strongly biased in favor of males. Four different reproductive indices and the high frequency of large oocytes, all suggest that the Iranian cichlid spawns at the end of winter and the beginning of spring. Mircoscopic gonadal maturation stages for both males and females were correlated to the gonadosomatic indices. The maximum number of larvae in the mouth of a female was 153.