排序方式: 共有223条查询结果,搜索用时 9 毫秒
41.
Aparna S Joshi Girish M Sharangpani Kyle Porter Sedigheh Keyhani Carl Morrison Amitabha S Basu Gauri A Gholap Abhi S Gholap Sanford H Barsky 《Cytometry. Part A》2007,71(5):273-285
BACKGROUND: Immunocytochemical methods for quantitating Her-2/neu immunoreactivity rest on subjective semi-quantitative interpretations with resulting interobserver, intraobserver, and fatigue variability. METHODS: To standardize and quantitate measurements of Her-2/neu immunoreactivity, we created epithelial-recognition and specific membrane-recognition algorithms, which could image breast cancer cells against a background of stroma, compartmentalize the cancer cell into nucleus, cytoplasm and membrane, and quantitate the degree of Her-2/neu membrane immunoreactivity based on both gray scale intensity and RGB colorimetric determinations. Image acquisition utilized either scanner or microscope with attached camera with a resolution of 20 pixels/10 microm. Areas of 150 whole slides were screened and the regions of interest manually selected for image processing. Three hundred TMA cores were directly processed. Images were acquired by jpg conversion of svs virtual slides or direct jpg photomicrograph capture. Images were then assessed for quality and processed. RESULTS: The digital algorithms successfully created a semi-automated imaging system whose algorithm-based ordinal values for Her-2/neu both strongly correlated with the subjective measurements (intraclass correlation: 0.84; 95% confidence interval: 0.79-0.89) yet exhibited no run variability. In addition, the algorithms generated immunocytochemical measurements of Her-2/neu on an expanded continuous scale, which more reliably distinguished true Her-2/neu positivity from true Her-2/neu negativity (determined by FISH) than subjective or algorithmic ordinal scale measurements. Furthermore, the continuous scale measurements could better resolve different levels of Her-2/neu overexpression than either subjective or algorithmic ordinal interpretation. Other semi-automated analysis systems have been used to measure Her-2/neu and other cellular immunoreactivities, but these either have required proprietary hardware or have been based on luminosity differences alone. In contrast, our algorithms are independent of proprietary hardware and are based on not just luminosity but also many other imaging properties including epithelial recognition and membrane morphology. CONCLUSION: These features provide a more accurate, versatile, and robust imaging analysis platform. 相似文献
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Fatemeh Khakdan Mojtaba Ranjbar Jaber Nasiri Farajollah Shahriari Ahmadi Abdolreza Bagheri Houshang Alizadeh 《Acta Physiologiae Plantarum》2016,38(9):226
The current investigation was conducted to elucidate the potential modulatory functions of both enzymatic and non-enzymatic scavenging elements of three Iranian basil (Ocimum basilicum L.) cultivars in response to different water-deficit stress treatments [i.e., control (W1: 100 % FC), mild (W2: 75 % FC), moderate (W3: 50 % FC), and severe (W4: 25 % FC)]. In general, the growth parameters, viz., plant height, number of lateral branches, number of flowers in the inflorescence per plant, and dry and fresh weights of leaves and inflorescence followed by yield were considerably affected by water-deficit stress levels (p ≤ 0.05), though some fluctuations were observed among three cultivars. Under severe water-deficit stress (W4), total chlorophyll content overall increased, while a pronounced reduction in the carotenoid content was observed by boosting of water-deficit stress intensities. Apart from some quantitative variations, ROS-scavenging enzymes, such as SOD, CAT, APX, GPX, and PPO, exhibited different behaviors versus different levels of water-deficit stress in the basil cultivars, concluding that their modulation could be a cultivar-dependent mechanism and stress-dependent mechanism. Among different metabolites detected in the essential oil of basil cultivars, both methyl chavicol and squalene were superior in the cultivars 2 and 3, while in cultivar 1, linalool and squalene were the predominant constituents, under water deprivation conditions. Taking all the features studied here into consideration, presumably, cultivar 1 is qualified enough to nominate as the most tolerant basil cultivar, could be accordingly utilized as a promising source/material for breeding programs of basil under drought stress, and possibly other abiotic stresses. 相似文献
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Nasiripourdori A Naderi-Manesh H Ranjbar B Khajeh K 《International journal of biological macromolecules》2009,44(4):311-315
The industrial utilization of savinase is mainly constrained by its stability limitations. In the present study, the irreversible thermoinactivation of savinase has been evaluated at 70 degrees C, and various possible mechanisms for irreversible thermoinactivation of savinase were examined. The main process seemed to be autodigestion of savinase at higher temperatures. To improve the thermal stability of the enzyme, the effect of two co-solvents (sorbitol and trehalose) on the enzyme's activity and stability was investigated. Both osmolytes prevented the autolysis of savinase at 70 degrees C without inactivating the enzyme; furthermore, the structural and kinetic stabilities of the enzyme increased in the presence of additives. 相似文献
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Laccases (benzenediol oxygen oxidoreductases, EC 1.10.3.2) are used in many biotechnological processes, including removal of polyphenols in beverages, decolorizing and detoxifying effluents, drug analysis and bioremediation. In the present work, we have tried to increase thermal stability of laccase from Bacillus HR03 using site directed point mutations. Glu188 was substituted with 2 positive (Lys and Arg) and one hydrophobic (Ala) residues. All mutations showed improved thermal stability. Thermal activation of laccase was also increased after introducing the mutations. Remarkably, the Glu188Lys variant showed 3-fold higher thermal activation and higher T50 (5 °C) with respect to the native enzyme. Furthermore steady-state kcat and Km values were influenced despite the distance between the mutated position and the catalytic site. In Glu188Arg mutation, the kcat was improved 3-fold and Km reduced by 25%. Interestingly, all three variants showed higher stability against urea as a chemical denaturant. Structural analyses of the native and mutated variants were carried out using fluorescence and far-UV circular dichroism. 相似文献
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Asad S Torabi SF Fathi-Roudsari M Ghaemi N Khajeh K 《International journal of biological macromolecules》2011,48(4):566-570
Horseradish peroxidase (HRP) has attracted intense research interest due to its potential applications in biotechnological fields. However, inadequate stability under prevalent conditions such as elevated temperatures and H(2)O(2) exposure, has limited its industrial application. In this study, stability of HRP was investigated in the presence of different buffer systems (potassium phosphate and Tris-HCl) and additives. It was shown that the concentration of phosphate buffer severely affects enzyme thermostability in a way that in diluted potassium phosphate buffer (10mM) half-life (from 13 to 35 min at 80 °C) and T(m) (from 73 to 77.5 °C) increased significantly. Among additives tested, trehalose had the most thermostabilizing effect. Exploring the role of glycosylation in stabilizing effect of phosphate buffer, non-glycosylated recombinant HRP was also examined for its thermal and H(2)O(2) stability in both diluted and concentrated phosphate buffers. The recombinant enzyme was more thermally stable in diluted buffer in accordance to glycosylated HRP; but interestingly recombinant HRP showed higher H(2)O(2) tolerance in concentrated buffer. 相似文献
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Sedigheh Esmaeilzadeh Bahabadi Mozafar Sharifi Najme Ahmadian Chashmi Jun Murata Honoo Satake 《Acta Physiologiae Plantarum》2014,36(12):3325-3331
Linum album has been shown to accumulate some lignans with antiviral and anticancer properties such as podophyllotoxin (PTOX) and 6-methoxy podophyllotoxin (MPTOX). In this research, we examined the effects of fungal elicitors on the production of lignans in L. album hairy root cultures. The biosynthesis of lignans was differentially affected by fungal elicitors. Fusarium graminearum extract induced the highest increase of PTOX, 190 μg g?1 dry weight (DW), and lariciresinol, 260 μg g?1 DW, which was two-fold and three-fold greater than the untreated control, respectively, while Trichoderma viride extract enhanced the accumulation of MPTOX, instead of PTOX, up to 160 µg g?1 DW, which was 2.4-fold greater than the control. The enhancing effects of fungal elicitors on lignans production was correlated with the increased expression of some key genes involved in the biosynthesis of these compounds, phenylalanine ammonia-lyase, cinnamoyl-CoA reductase, cinnamyl-alcohol dehydrogenase and pinoresinol-lariciresinol reductase. 相似文献
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Nakhaee Moghadam Maryam Khameneh Bahman Fazly Bazzaz Bibi Sedigheh 《Food biophysics》2019,14(3):346-353
Food Biophysics - Recently, there has been growing interest in usingnatural vesicles for encapsulation of variousfood-grade ingredients. The structure ofyeast cells, along with their presence in... 相似文献
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Mohammad Mahdavi Arsalan Ashtari Mahsima Khoshneviszadeh Sara Ranjbar Ameneh Dehghani Tahmineh Akbarzadeh Bagher Larijani Mehdi Khoshneviszadeh Mina Saeedi 《化学与生物多样性》2018,15(7)
A novel series of benzimidazole‐1,2,3‐triazole hybrids containing substituted benzyl moieties were designed, synthesized and evaluated for their inhibitory activity against mushroom tyrosinase. The results indicated that 2‐(4‐{[1‐(3,4‐dichlorobenzyl)‐1H‐1,2,3‐triazol‐4‐yl]methoxy}phenyl)‐1H‐benzimidazole ( 6g ) and 2‐(4‐{[1‐(4‐bromobenzyl)‐1H‐1,2,3‐triazol‐4‐yl]methoxy}phenyl)‐1H‐benzimidazole ( 6h ) exhibited effective inhibitory activity with IC50 values of 9.42 and 10.34 μm , respectively, comparable to that of kojic acid as the reference drug (IC50 = 9.28 μm ). Kinetic study of compound 6g confirmed mixed‐type inhibitory activity towards tyrosinase indicating that it can bind to free enzyme as well as enzyme‐substrate complex. Also, molecular docking analysis was performed to determine the binding mode of the most potent compounds ( 6g and 6h ) in the active site of tyrosinase. Consequently, 6g and 6h derivatives might serve as promising candidates in cosmetics, medicine or food industry, and development of such compounds may be of an interest. 相似文献