Adjusting count period strategies to improve the accuracy of forest bird abundance estimates from point transect distance sampling surveys

Although point transect distance sampling methods have become widely used in surveys of forest birds, there has been no attempt to tailor field methods to maximize the accuracy of abundance estimates by minimizing the effects of violations of the method's critical assumptions, which are: (1) birds at distance 0 m are detected with certainty, (2) birds are detected at their initial location and (3) distances to objects are measured accurately. We investigate the effects on abundance estimates for Philippine forest birds of varying the count period from 2 to 10 min, and of including and excluding a pre‐count settling down period. Encounter rates were highly sensitive to count period length but density estimates from 10‐min count periods were, on average, only 13% higher than those from 2‐min periods, and in several cases were actually lower than those from periods of 6–8 min. This was because birds tended to be recorded at greater distances from the recorder as the count period went on, thus ‘stretching out’ detection functions while having little effect on detection rates close to the recorder. For some bird groups, including canopy frugivores and upperstorey gleaning insectivores, density estimates were more than twice as high without than with a settling down period. We suggest that movement away from the recorder is more common than attraction to the recorder, and that unless pilot studies show otherwise, similar studies should not use a settling down period for surveying many species. Count periods that maximized probability of bird detection close to the central point while minimizing the unwanted effects of bird movement during the count period were: 4 min for omnivores, 6 min for nectarivores and upperstorey gleaning insectivores, 8 min for understorey insectivores and canopy frugivores, and a full 10 min for sallying insectivores, ground‐dwellers, carnivores and coucals/koels. We use the results to suggest ‘group‐specific’ count period regimes that could help maximize the accuracy of density estimates from similar studies of tropical forest birds.     

Using multitemporal digital elevation model data for detecting canopy gaps in tropical forests due to cyclone damage: An initial assessment

Abstract The detection and mapping of canopy disturbance caused by natural events such as cyclones in tropical rainforests is important for monitoring and understanding rainforest dynamics and recovery. In February 1999 tropical cyclone Rona crossed the coastline of Far North Queensland, Australia, causing significant damage to the rainforest canopy in some areas. This paper examines the application of multitemporal canopy digital elevation models (DEMs) generated by a NASA‐operated airborne radar mapping system called TOPSAR in 1996 and 2000, for detection of canopy disturbance caused by cyclone damage. Canopy damage was mapped here by identifying areas with a significant decrease in canopy height estimated from the difference of the 1996 and 2000 TOPSAR DEMs. Conventional aerial photographs, flown shortly after the cyclone (March 1999), were used to validate the resulting map of cyclone damaged rainforest canopy. The results showed that the DEM‐derived canopy damage map performed reasonably well when comparing the spatial distribution and size of damaged areas, while taking into account the time difference between cyclone damage and the second radar acquisition. Some errors were encountered on the steeper slopes which were related to terrain distortions inherent in radar images of steep terrain. The height accuracy of the DEM was close to the depth of some of the gaps being mapped, which also contributed to errors. Even so, the results demonstrate there may be potential for weather‐independent, regional‐scale mapping of forest canopy change from imaging radar that is not always possible from traditional optical means of measuring canopy elevation, for example, airborne laser data and stereo aerial photography. This may be possible in relatively flat areas, provided the second radar acquisition occurs within months of the damaging event. Further algorithm refinement is required to improve its robustness and the range of topographies where this approach can provide reliable estimates of the extent of canopy disturbance.     

Field experiments on the mobility of benthic invertebrates in a southern English stream

1. In each of twenty-six week-long experiments, the colonization by macroinvertebrates of boxes of natural sediment in a stony stream was measured. The experiments took place between February and November 1992 and environmental conditions prevailing during the weeks (particularly discharge and temperature) differed widely.
2. Colonization rate also varied widely between the weekly experiments and was sensitive to discharge, temperature and background benthic density, depending on the taxa considered.
3. A 'mobility index' measured colonization rate independently of background benthic density. This index was most strongly and positively correlated with discharge for the abundant stonefly Leuctra nigra, the net-spinning caddis Plectrocnemia conspersa and the Chironomidae, perhaps indicating that their mobility is physically driven by the influence of flow on drift.
4. Mobility in a second stonefly ( Nemurella pictetii ) was greatest in summer, when flows were low but temperature was high. Peak mobility in this species occurred during an ochreous bloom on the stream bed. It is likely the mobility of N. pictetii is more active than the other taxa.
5. There were thus differences among taxa in their mobility at baseflow and in their susceptibility to flow fluctuations. The population consequences of differences in mobility among taxa are discussed.     

Microbial growth and detritus transformations during decomposition of leaf litter in a stream

SUMMARY. 1. Despite the widely accepted importance of bacteria and fungi in degrading detritus in aquatic ecosystems there is still very little quantitative information on the abundance and dynamics of these microorganisms. Using epifluorescent microscopy, we measured the biomass of bacteria and fungi during decomposition of three types of leaf detritus. Bacterial production was determined from the rate of incorporation of ³H-thymidine into DNA.
2. The transformation of leaf carbon into dissolved organic carbon and fine particulate organic carbon was followed in order to compare the amounts of leaf material that were converted into these 'end-products' of decomposition versus the amount converted into microbial biomass.
3. The amount of microbial carbon in the leaf-detritus complex never exceeded 5.2% of the total carbon, and fungal biomass was always much greater than bacterial biomass. Despite the greater standing stock of fungi, the rapid turnover of bacteria (doubling about once per day) implies that their role in degrading leaf litter or as a food source for detritivores might be as great as for fungi.
4. Removal of microbial biomass from leaf litter may occur as release of fungal spores and consumption or shedding of bacterial biomass. Fungal spores can be a significant part of the fine particulate organic carbon released from leaf detritus and potentially represent an important food resource for filter-feeding organisms.     

Population Dynamics of Soil and Vegetation Protozoa

Many fresh-water protozoa can be found in litters and soils,but the ubiquitous species are those which are able to copewith fluctuating moisture conditions. Terrestrial protozoa aremore characteristic of bryophyte-soil habitats than aquaticecosystems. Nutritionally, two groups have evolved in responseto the plant community: naked, predominantly bacterial feeders,whose abundance is determined by the decomposability of thelitter in which they live; and the slow growing, humusassociatedtestacea, which are more abundant in the litters of slow decomposability.Ubiquitous species comprise about 90% of the protozoa in soils.More continuous moisture conditions enhance the appearance ofadditional species. Hence species diversity indicates highermoisture content of a soil. Protozoa may contribute to the functioningof the soil ecosystem by inducing fiocculation of bacterialpopulations and recycling of minerals through ingestion of bacteriaand excretion of soluble products. The surface of vegetationappears to represent the most terrestrial habitat a protozoancan exploit, because in contrast to the litter-soil ecosystem,only one species, Colpoda cucullus, dominates the population.     

MAMMALIAN EXTINCTIONS IN THE LATE PLEISTOCENE OF NORTHERN EURASIA AND NORTH AMERICA

The 'mass extinctions' at the end of the Pleistocene were unique, both in the Pleistocene and earlier in the geological record, in that the species lost were nearly all large terrestrial mammals. Although a global phenomenon, late Pleistocene extinctions were most severe in North America, South America and Australia, and moderate in northern Eurasia (Europe plus Soviet Asia). In Africa, where nearly all of the late Pleistocene 'megafauna' survives to the present day, losses were slight. Ruling out epidemic disease or cosmic catastrophe, the contending hypotheses to explain late Pleistocene extinctions are: (a) failure to adapt to climatic/environmental change; and (b) extermination by human hunters ('prehistoric overkill'). This review focuses on extinctions in northern Eurasia (mainly Europe) in comparison with North America. In addition to reviewing the faunal evidence, the highly relevant environmental and archaeological backgrounds are summarized. The latest survival dates of extinct species are estimated from stratigraphic occurrences of fossil remains, radiocarbon dates, or association with archaeological industries. The Middle and Upper Pleistocene (ca. 700,000-10,000 BP) in northern Eurasia and North America was a time of constantly changing climate, ranging from phases of extensive glaciation in cold stages, to temperate periods (interglacials). In the Lateglacial (ca. 15,000-10,000 BP), during which most extinctions occurred, there was a major reorganization of vegetation, mainly involving the replacement of open vegetation by forests. These changes were more profound than earlier in the Last Cold Stage, but similar in nature to vegetational changes that took place at previous cold stage/interglacial transitions. The archaeological record shows that humans have been present in Europe since the early Middle Pleistocene. The arrival in Europe ca. 35,000 BP of 'anatomically modern humans', with their technologically more advanced upper palaeolithic industries, was a 'quantum leap' in human history. Extinctions occurred throughout the European Pleistocene, but until the late Pleistocene most losses were replaced by the evolution or immigration of new species, and most of those lost without replacement were small mammals. In marked contrast, extinctions without replacement in the late Pleistocene were almost entirely confined to the largest mammals (greater than 1000 kg) and some medium-large species (100-1000 kg).(ABSTRACT TRUNCATED AT 400 WORDS)     

Extracellular Killing of Trypanosoma cruzi Amastigotes by Human Eosinophils1

Granules released from human eosinophils upon interaction with Trypanosoma cruzi amastigotes in vitro were seen attached to the surface of non-internalized parasites by electron microscopy. Amastigote damage was preceded by the binding of eosinophil granule material to its membrane, and eosinophil granule major basic protein (MBP) bound to the parasite surface was readily detectable. Additional evidence of eosinophil cytotoxicity for extracellular amastigotes was the observation that amastigotes trapped between two eosinophils, without being ingested by either one, were destroyed at the interface. Amastigotes isolated from the spleens of infected mice or grown in culture were similarly sensitive to the lytic effects of purified MBP. These results demonstrate the ability of human eosinophils to lyse T. cruzi amastigotes extracellularly in the absence of antibody and suggest that MBP may be involved in the effect. Thus, eosinophils, known to be capable of destroying phagocytosed amastigotes, could also contribute to the clearance of these parasites through extracellular killing.     

Dynamics of tuberculosis in a naturally infected Badger population

The dynamics of bovine tuberculosis infection in a wild Badger population have been studied since 1981. Faeces are sampled regularly to determine the distribution of infection in the study area. Badgers in known infected social groups, plus the neighbouring groups, are periodically caught and subjected to full clinical and bacteriological examination to monitor the progression of infection within and between groups of Badgers. The interim results of this study are presented and discussed. During 5 years (1981–1985), the temporal spread of infection between social groups in the study area was slow and restricted. Some clinically affected Badgers have survived for long periods. Evidence of infection in individual Badgers indicates that pseudo-vertical (mother to cub) transmission may be important in the maintenance of infection in the Badger population. There is also evidence of horizontal transmission by bite wounding and aerosol infection. Badger mortality due to Mycobacterium bovis infection was low, and the prevalence of infection in male Badgers is greater than in females. The data accumulated so far show no apparent relationship between Badger population density and the prevalence of M. bovis infection, nor is there any evidence to support the hypothesis that M. bovis infection acts to depress Badger population density significantly below disease-free levels. Cattle and infected Badgers can co-exist for long periods without the disease necessarily being transmitted to cattle.     

Further Studies on Substrates Inducing Metacyclogenesis in Trypanosoma cruzi

Epimastigotes of Trypanosoma cruzi, Peru strain, incubated in Contreras' artificial triatomine urine transformed into metacyclic trypomastigotes when 10 mM L-glutamine, L-asparagine or D-fructose was added to the medium. Metacyclogenesis with these substrates was comparable to the percent metacyclic morphotype formation induced by L-proline and significantly greater than that stimulated by 10 mM D-glucose. Sodium acetate (10 mM) increased transformation induced by L-proline, and L-hydroxyproline (10 mM) increased transformation induced by D-fructose. Phosphoenolpyruvate (10 mM) inhibited L-proline-induced metacyclic trypomastigote stage formation. Three antimetabolites, azetidine 2-carboxylate (5 mM), malonic acid (1 mM), and desthiobiotin (5 mM), completely inhibited D-fructose-induced but not L-proline-induced transformation. The Costa Rica, Y, and CL strains of T. cruzi showed different patterns of percent metacyclogenesis with substrates that induce transformation in the Peru strain.     

Derivation of Plant Cell Wall Water Content by Examination of the Water-Holding Capacity of Membrane-Disrupted Tissues10

Plant cell lumina are several orders of magnitude larger thancell wall pores. If the membranes of the plant sample are disruptedand the tissue dried out, a value should be reached at whichthe cell lumina have drained but the cell walls remain relativelyhydrated. The water content of membrane-disrupted tissues atlow may, therefore, serve as a good approximation of plantcell wall water content (CW). The relationship between and water content of membrane-disruptedtissues was measured for four grass spaces over the range of0 to –40 MPa. It was found that most water loss occurredabove a of – 10 MPa. CW was estimated from the watercontent of membrane-disrupted tissues at lower and it was foundthat there was very little intra-or intraspecific variabilityin CW estimates when water content was expressed as a percentagedry weight of the tissue. This is in contrast to the high variabilityin CW estimated from the analysis of inverse water potential—watercontent (IP—WC) curves measured with the thermocouplepsychrometer. Applications of the membrane-disruption methodof estimating CW of plant tissue are discussed. Key words: Cell wall water, thermocouple psychrometer, membrane-disruption