The demography of coarse wood in north temperate lakes

1. Exchange of material across habitat boundaries is a key process in riparian zones. The movement of coarse wood from lakeshore forests to the littoral zone, where it provides habitat for aquatic organisms, is not well understood. In 2003, we resampled coarse wood within the littoral zone of four lakes in Northern Wisconsin (U.S.A.), that had originally been surveyed in 1996, to quantify the spatial arrangement of littoral coarse wood and estimate input, loss and movement rates.
2. All four lakes had a clumped pattern of littoral coarse wood, and the locations of clusters were similar in both census years. Littoral coarse wood was more abundant than expected on moderate to steep slopes, on southern shorelines, and in areas with sparse residential development.
3. All four lakes had a net accumulation of coarse wood; rates of wood input ranged from 0.5 to 1.9 logs km⁻¹ year⁻¹, i.e. there was more wood in 2003 than 1996. Movement rates of tagged logs varied 14-fold among lakes, with a maximum in one lake of 42% of logs recovered in 2003 more than 20 m from their 1996 location. Median distance moved ranged from 22 to 323 m among the four lakes.
4. Areas of persistently high wood density may be keystone habitats whose presence enables the persistence of populations of certain aquatic organisms. Conservation of locations with high wood density may be important to maintain target densities of coarse wood of lakes with human development.     

Effects of temperature and elevation on habitat use by a rare mountain butterfly: implications for species responses to climate change

Abstract 1. The present study used the mountain specialist butterfly Parnassius apollo as a model system to investigate how climate change may alter habitat requirements for species at their warm range margins. 2. Larval habitat use was recorded in six P. apollo populations over a 700 m elevation gradient in the Sierra de Guadarrama (central Spain). Larvae used four potential host species (Sedum spp.) growing in open areas amongst shrubs. 3. Parnassius apollo host‐plant and habitat use changed as elevation increased: the primary host shifted from Sedum amplexicaule to Sedum brevifolium, and larvae selected more open microhabitats (increased bare ground and dead vegetation, reduced vegetation height and shrub cover), suggesting that hotter microhabitats are used in cooler environments. 4. Larval microhabitat selection was significantly related to ambient temperature. At temperatures lower than 27 °C, larvae occupied open microhabitats that were warmer than ambient temperature, versus more shaded microhabitats that were cooler than ambient conditions when temperature was higher than 27 °C. 5. Elevational changes in phenology influenced the temperatures experienced by larvae, and could affect local host‐plant favourability. 6. Habitat heterogeneity appears to play an important role in P. apollo larval thermoregulation, and may become increasingly important in buffering populations of this and other insect species against climatic variation.     

Effects of landscape features and demographic history on the genetic structure of Testudo marginata populations in the southern Peloponnese and Sardinia

Testudo marginata, the largest European land tortoise, is suffering habitat degradation and destruction. Some populations, in markedly degraded habitats, are characterized by divergent morphotypes. However, the evolutionary significance of these morphotypes is of debate. Using 11 polymorphic microsatellites, we studied: (1) marginated tortoises from Sardinia that display a divergent morphotype – this population was potentially introduced from Greece; and (2) an area in the southern Peloponnese that includes a small and degraded zone in which marginated tortoises are dwarf. Genetic analyses run without any a priori assignment clearly acknowledge the specimens sampled in the territory of the dwarf form as a single group whilst Sardinian specimens are clustered with other specimens from the northern part of the area sampled in Greece. Demographic analyses suggest that Sardinian tortoises originated recently from some of the populations sampled in the northern part of the area sampled in Greece. Over locations sampled in Greece, a landscape‐genetic analysis allowed us to detect potential landscape features that may reduce gene flow between the dwarf form territory and surrounding areas. Our results suggest that the territory of the dwarf form is particularly propitious for marginated tortoises and that conservation regulations in Greece should be reinforced to protect this area from increasing impact of human activities changing from traditional agriculture to mechanization and extensive use of chemicals. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2012, 105 , 591–606.     

Phase determination from direct sequencing of length‐variable DNA regions

For diploid organisms, haplotype determination usually requires sequencing cloned polymerase chain reaction (PCR) products or comparing the genotypes of several individuals. We found out that phase could be reconstructed from direct sequencing of mixed PCR products by combining for each individual the complementary information contained in its forward and reverse chromatograms, provided these products had different lengths. When applied to the internal transcribed spacer 2 (ITS2) from corals of the genus Pocillopora, this new method allowed us to identify two dominant sequence types in some specimens; however, sequencing cloned PCR products from the same specimens yielded more variants, including possible PCR‐generated recombination artifacts.     

Impacts of climate change and urban development on the spotted marsh frog (Limnodynastes tasmaniensis)

Climate change and urbanization are among the most serious threats to amphibians, although little is known about their combined effects. We used a predictive spatial habitat suitability model to explore the potential impacts of climate change and urban development on the spotted marsh frog (Limnodynastes tasmaniensis) on the urban‐fringe of Melbourne, Australia. The CSIRO climate‐change predictions for the region indicate likely temperature increases of 3°C, and annual rainfall reductions of around 200 mm by the year 2070. Much of the study area overlaps a region that has been identified as one of the city's growth corridors. We used Bayesian logistic regression modelling to estimate current and future habitat suitability of pond sites in the Merri Creek catchment, exploring a range of best‐ to worst‐case scenarios through the use of hydrological and urbanization models. Our predictions for 2070, even under a moderate climate‐change scenario, suggest that the majority of ponds in the study area will be dry throughout much of the year. This has obvious implications for L. tasmaniensis, which is an aquatic breeding species. However, in the short term, urbanization is likely to have a more significant effect on the distribution of L. tasmaniensis in the Merri Creek catchment, particularly if development moves beyond the current urban growth boundary. The combined effects of climate change and urbanization could have a profound impact on the species, potentially causing it to disappear from within the study area. We provide recommendations for including such predictive models in urban planning and restoration activities to prepare for future conservation challenges.     

A cost‐effective method of assessing thermal habitat quality for endotherms

The conservation of many endothermic species depends critically on the availability of suitable retreat sites, yet we know little about the variation in thermal quality of such microhabitats. Studies of thermal habitat suitability for birds and mammals must account for the effect of endothermic heat production on their microclimates. For example, endotherms may significantly raise the air temperature in their retreat sites and this effect must be considered when assessing retreat site quality. We devised an inexpensive means by which to construct pseudo‐endothermic ‘environmental temperature’ models with the use of disposable heat pads. We applied this technique to investigate thermal aspects of nest box design, illustrating the potential positive and negative effects of nest box insulation depending on the environmental context. We suggest that, from a thermal perspective, the avoidance of heat stress is an important and underappreciated issue in the retreat site selection of endotherms.     

Evidence for fatal collisions and kleptoparasitism while plunge‐diving in Gannets

Plunge‐diving is a highly successful strategy for dealing with the challenges confronting birds feeding on pelagic prey. We tested for evidence of fatal injuries due to collision between conspecifics in plunge‐diving Australasian Gannets Morus serrator and Cape Gannets Morus capensis, respectively, by performing post‐mortem examinations of carcasses recovered from New Zealand waters and analysing video footage of Cape Gannet foraging events from South Africa. We found evidence of accidental collisions between Gannets and also observed a case of attempted kleptoparasitism, in which a diving Cape Gannet targeted a previously captured fish in the beak of a conspecific.     

BROMALITES FROM THE SOOM SHALE LAGERSTÄTTE (UPPER ORDOVICIAN) OF SOUTH AFRICA: PALAEOECOLOGICAL AND PALAEOBIOLOGICAL IMPLICATIONS

Abstract:  Bromalites from the Soom Shale are allocated to five main categories on the basis of shape, content and internal structure: those containing broken conodont elements; those containing brachiopod fragments; corrugated/spiral forms; coiled coprolites and wrinkled coprolites. It is impossible to allocate specific bromalites to the organisms that formed them, but the occurrence of crushed discinoid valves in several specimens demonstrates that an effective durophagous predator was present in the Soom Shale community. The presence of fragmented elements of conodonts in other specimens provides direct evidence of tiering within the predatory trophic level in the Soom Shale. Conodonts, other agnathan vertebrates, orthoconic cephalopods and eurypterids are all possible contenders for producing most of the bromalites recorded, but there may have been unrecorded large predators in the community.     

Multiscale Habitat Selection by Burrowing Owls in Black-Tailed Prairie Dog Colonies

ABSTRACT Some populations of western burrowing owls (Athene cunicularia hypugaea) have declined in recent decades. To design and implement effective recovery efforts, we need a better understanding of how distribution and demographic traits are influenced by habitat quality. To this end, we measured spatial patterns of burrowing owl breeding habitat selection within black-tailed prairie dog (Cynomys ludovicianus) colonies in northeastern Wyoming, USA. We compared burrow-, site-, colony-, and landscape-scale habitat parameters between burrowing owl nest burrows (n = 105) and unoccupied burrows (n = 85). We sampled 4 types of prairie dog colonies: 1) owl-occupied, active with prairie dogs (n = 16); 2) owl-occupied, inactive (n = 13); 3) owl-unoccupied, active (n = 14); and 4) owl-unoccupied, inactive (n = 14). We used an information-theoretic approach to examine a set of candidate models of burrowing owl nest-site selection. The model with the most support included variables at all 4 spatial scales, and results were consistent among the 4 types of prairie dog colonies. Nest burrows had longer tunnels, more available burrows within 30 m, and less shrub cover within 30 m, more prairie dog activity within 100 m, and were closer to water than unoccupied burrows. The model correctly classified 76% of cases, all model coefficients were stable, and the model had high predictive ability. Based on our results, we recommend actions to ensure persistence of the remaining prairie dog colonies as an important management strategy for burrowing owl conservation in the Great Plains of North America.