Influence of fine‐scale habitat requirements and riparian degradation on the distribution of the purple‐crowned fairy‐wren (Malurus coronatus coronatus) in northern Australia

Species distributions are influenced by variation in environmental conditions across many scales. Knowledge of fine‐scale habitat requirements is important for predicting species occurrence and identifying suitable habitat for target species. Here we investigate the perplexing distribution of a riparian habitat specialist, the western subspecies of the purple‐crowned fairy‐wren (Malurus coronatus coronatus), in relation to fine‐scale habitat associations and patterns of riparian degradation. Surveys of vegetation attributes, river structure and disturbance indicators that are likely to be causal determinants of the species occurrence were undertaken at 635 sites across 14 catchments. Generalized Linear Mixed Modelling demonstrated that the probability of purple‐crowned fairy‐wren occurrence increased with Pandanus aquaticus crown cover, shrub density and height of emergent trees, while riparian structure and signs of cattle were indirect predictors of occurrence. As our study area predominantly contained Pandanus type habitat, we failed to identify river grass as an important component of habitat. Predictions from a cross‐validated model of purple‐crowned fairy‐wren occurrence suggested distribution is constrained by three factors: (i) low quality of local habitat within catchments where the species occurs; (ii) broad‐scale reduction in habitat quality that has resulted in extinction of the species from parts of its range; and (iii) unmeasured variables that limit the exploitation of suitable habitat. The reliance of the species on dense shrubby understorey suggests conservation efforts should aim to maintain the complexity of understorey structure by managing fire and grazing intensity. Efforts to halt the continuing decline of riparian condition and maintain connectivity between areas of quality habitat will help to ensure persistence of riparian habitat specialists in northern Australia.     

Response of the soil seed‐bank of Cumberland Plain Woodland to heating

Abstract Soil was investigated in a Cumberland Plain Woodland community to determine the presence of a soil seed‐bank and whether species richness and abundance of plants germinating from it were affected by heating such as that experienced in a fire. Soil samples were taken from the Holsworthy Military Area, in the south‐eastern region of the Sydney Basin, New South Wales, Australia, and one of four treatments was applied; soil was heated to 80°C, 40°C, unheated or unheated with litter not removed. Sixty‐eight species, representing 26 families including 11 exotic and 57 native species germinated from the soil. Herbs and grasses dominated and were in similar proportions to those surveyed in the above‐ground vegetation, suggesting that the soil seed‐bank reflected the current structure of the vegetation, although species composition differed. Species responded differently to heating. The seeds of some species germinated when heated at a higher temperature (80°C), particularly those from the family Fabaceae, whereas other species were more common in unheated or lightly heated samples (40°C). This suggests that fire is likely to change the species composition of the above‐ground vegetation and indicates that management must ensure that species that do not germinate when heated are maintained, as well as those species that germinate following heating. A large proportion of soil seed‐bank species showed low germination rates in the trials, and 112 above‐ground species did not germinate in the soil samples. We do not understand whether species of these two sets do not produce a soil‐stored seed‐bank or whether the seed‐bank has been depleted by past practices at Holsworthy. Further research is needed.     

Root and Shoot Growth of Plants Treated with Abscisic Acid

Young seedlings of Capsicum annum L., Commelina communis L.and maize (Zea mays L.) were subjected to a mild water-stressingtreatment and/or treated with abscisic acid (ABA). Plants rootedin soil received a soil-drying treatment and their leaves weresprayed with a 10–⁴ M solution of ABA. Plants grown insolution culture were stressed by the addition of polyethyleneglycol (PEG) to the rooting medium and ABA was also added tothe rooting medium, either with or without PEG. The effectsof both treatments on the growth of roots and shoots and theultimate root: shoot dry weight ratio were very similar. Shootgrowth was limited both by water stress and by ABA application;while there was some evidence that mild water stress and/orABA application may have resulted in a stimulation of root growth.More severe water stress reduced the growth of roots but theoverall effect of stress was to increase the ratio of rootsto shoots. Capsicum annum L., Commelina communis L., Zea mays L., water stress, abscisic acid     

Correlation between leaf growth variables suggest intrinsic and early controls of leaf size in Arabidopsis thaliana

Leaf development is affected by both internal (genetic) and external (environmental) regulatory factors. The aim of this work was to investigate how leaf growth variables are related to one another in a range of environments. The leaf growth variables of wild-type Arabidopsis thaliana and leaf development mutants (ang4, ron2-1, elo1, elo2 and elo4) were studied under different incident light treatments (light and shade). The leaves studied were altered in various leaf development variables, such as the duration of expansion, relative and absolute expansion rates, epidermal cell size, epidermal cell number and initiation rate. Final leaf area was correlated to maximal absolute leaf expansion rate and cell number, but not to duration of leaf expansion or cell size. These relationships were common to all studied genotypes and light conditions, suggesting that leaf size is determined early in development. In addition, the early variables involved in leaf development were correlated to one another, and initial relative expansion rate was negatively correlated to the duration of expansion. These relationships between the leaf development variables were used to construct a conceptual model of leaf size control.     

Multiscale Habitat Selection by Burrowing Owls in Black-Tailed Prairie Dog Colonies

ABSTRACT Some populations of western burrowing owls (Athene cunicularia hypugaea) have declined in recent decades. To design and implement effective recovery efforts, we need a better understanding of how distribution and demographic traits are influenced by habitat quality. To this end, we measured spatial patterns of burrowing owl breeding habitat selection within black-tailed prairie dog (Cynomys ludovicianus) colonies in northeastern Wyoming, USA. We compared burrow-, site-, colony-, and landscape-scale habitat parameters between burrowing owl nest burrows (n = 105) and unoccupied burrows (n = 85). We sampled 4 types of prairie dog colonies: 1) owl-occupied, active with prairie dogs (n = 16); 2) owl-occupied, inactive (n = 13); 3) owl-unoccupied, active (n = 14); and 4) owl-unoccupied, inactive (n = 14). We used an information-theoretic approach to examine a set of candidate models of burrowing owl nest-site selection. The model with the most support included variables at all 4 spatial scales, and results were consistent among the 4 types of prairie dog colonies. Nest burrows had longer tunnels, more available burrows within 30 m, and less shrub cover within 30 m, more prairie dog activity within 100 m, and were closer to water than unoccupied burrows. The model correctly classified 76% of cases, all model coefficients were stable, and the model had high predictive ability. Based on our results, we recommend actions to ensure persistence of the remaining prairie dog colonies as an important management strategy for burrowing owl conservation in the Great Plains of North America.     

AN ORDOVICIAN LOBOPODIAN FROM THE SOOM SHALE LAGERSTÄTTE, SOUTH AFRICA

Abstract:  The first lobopodian known from the Ordovician is described from the Soom Shale Lagerstätte, South Africa. The organism shows features homologous to Palaeozoic marine lobopodians described from the Middle Cambrian Burgess Shale, the Lower Cambrian Chengjiang biota, the Lower Cambrian Sirius Passet Lagerstätte and the Lower Cambrian of the Baltic. The discovery provides a link between marine Cambrian lobopodians and younger forms from the Silurian and Carboniferous. The new fossil preserves an annulated trunk, lobopods with clear annulations, and curved claws. It represents a rare record of a benthic organism from the Soom Shale, and demonstrates intermittent water oxygenation during the deposition of the unit.     

Phase determination from direct sequencing of length‐variable DNA regions

For diploid organisms, haplotype determination usually requires sequencing cloned polymerase chain reaction (PCR) products or comparing the genotypes of several individuals. We found out that phase could be reconstructed from direct sequencing of mixed PCR products by combining for each individual the complementary information contained in its forward and reverse chromatograms, provided these products had different lengths. When applied to the internal transcribed spacer 2 (ITS2) from corals of the genus Pocillopora, this new method allowed us to identify two dominant sequence types in some specimens; however, sequencing cloned PCR products from the same specimens yielded more variants, including possible PCR‐generated recombination artifacts.     

Impacts of climate change and urban development on the spotted marsh frog (Limnodynastes tasmaniensis)

Climate change and urbanization are among the most serious threats to amphibians, although little is known about their combined effects. We used a predictive spatial habitat suitability model to explore the potential impacts of climate change and urban development on the spotted marsh frog (Limnodynastes tasmaniensis) on the urban‐fringe of Melbourne, Australia. The CSIRO climate‐change predictions for the region indicate likely temperature increases of 3°C, and annual rainfall reductions of around 200 mm by the year 2070. Much of the study area overlaps a region that has been identified as one of the city's growth corridors. We used Bayesian logistic regression modelling to estimate current and future habitat suitability of pond sites in the Merri Creek catchment, exploring a range of best‐ to worst‐case scenarios through the use of hydrological and urbanization models. Our predictions for 2070, even under a moderate climate‐change scenario, suggest that the majority of ponds in the study area will be dry throughout much of the year. This has obvious implications for L. tasmaniensis, which is an aquatic breeding species. However, in the short term, urbanization is likely to have a more significant effect on the distribution of L. tasmaniensis in the Merri Creek catchment, particularly if development moves beyond the current urban growth boundary. The combined effects of climate change and urbanization could have a profound impact on the species, potentially causing it to disappear from within the study area. We provide recommendations for including such predictive models in urban planning and restoration activities to prepare for future conservation challenges.     

Benthic macrofauna and sediments in the Severn Estuary

In the Severn Estuary and Bristol Channel, a multivariate analysis indicated eight groupings of macrobenthic fauna, each associated with a different physical habitat. Samples were faunistically impoverished, especially in sublittoral areas, but greater species richness was associated with reefs of Sabellaria alveolata , which extended well into the estuary.     

Sex, diet and feeding method-related differences in body condition in the Oystercatcher Haematopus ostralegus

Measurements were made of Oystercatcher corpses to find the most reliable measure of body condition in live birds. Total body weight was as accurate as muscle thickness in assessing the weight of the pectoral muscles, a major store of protein reserves. Total body weight was also a good indicator of fat reserves. Wing‐length was the most reliable measure of body size. Body condition in live birds was measured as an individual's residual weight derived from a general linear model of (loge) body weight against age, month, (loge) wing‐length and time since capture. On the Exe estuary in autumn, there was no significant difference in body condition between same‐age Oystercatchers of different diets and feeding methods. In the winter months, however, body condition differed significantly between mussel feeders using different feeding methods, and between mussel feeders and birds that fed on worms and clams. Differences between diet/feeding methods were not the same for each age group. Birds with the highest mean body condition index in adults were mussel hammerers, in immatures mussel stabbers and in juveniles, worm/clam feeders. No significant difference in body condition was found between the sexes in any age group in autumn. In winter, when birds with the same diet/feeding method were considered, females were significantly heavier than males. However, when birds of all diets and feeding methods were combined, weight differences between the sexes were not apparent. We examine reasons why birds with certain diets and feeding methods may be heavier than others in winter, and why females are sometimes heavier than males. We conclude that, in most cases, it is due to differences between birds in their ability to achieve a common target weight. However, we conclude that adult females try to achieve a higher target weight than males, probably as a premigratory and prebreeding strategy. In the light of this, we consider the consequences for adult females, in terms of reproductive success and survival, of specializing in diets and feeding methods associated with lower body weights in winter.