Telomeres and a repeat-rich chromosome encode effector gene clusters in plant pathogenic Colletotrichum fungi

Members of the Colletotrichum gloeosporioides species complex are causal agents of anthracnose in many commercially important plants. Closely related strains have different levels of pathogenicity on hosts despite their close phylogenetic relationship. To gain insight into the genetics underlying these differences, we generated and annotated whole-genome assemblies of multiple isolates of C. fructicola (Cf) and C. siamense (Cs), as well as three previously unsequenced species, C. aenigma (Ca), C. tropicale and C. viniferum with different pathogenicity on strawberry. Based on comparative genomics, we identified accessory regions with a high degree of conservation in strawberry-pathogenic Cf, Cs and Ca strains. These regions encode homologs of pathogenicity-related genes known as effectors, organized in syntenic gene clusters, with copy number variations in different strains of Cf, Cs and Ca. Analysis of highly contiguous assemblies of Cf, Cs and Ca revealed the association of related accessory effector gene clusters with telomeres and repeat-rich chromosomes and provided evidence of exchange between these two genomic compartments. In addition, expression analysis indicated that orthologues in syntenic gene clusters showed a tendency for correlated gene expression during infection. These data provide insight into mechanisms by which Colletotrichum genomes evolve, acquire and organize effectors.     

Characterization of two carbonyl reductases from Ogataea polymorpha NBRC 0799

Applied Microbiology and Biotechnology - The enzyme responsible for the enantioselective production of (S)-1,1,1-trifluoro-2-propanol ((S)-TFP) from 1,1,1-trifluoroacetone (TFA) has been identified...     

Immunolocalization of the 33 kD protein in the microvilli of rabbit small-intestinal epithelial cells

Rabbit small-intestinal microvilli isolated by a Ca²⁺ precipitation method contain a 33 kD protein, which has not been observed in microvilli isolated in the presence of Ca²⁺-chelators. The intracellular localization of this protein in rabbit intestinal epithelial cells was studied by immunofluorescence and immunoperoxidase microscopy, and was compared with that of aminopeptidase M, a well-known microvillus membrane-bound enzyme. The results obtained show that the 33 kD protein is located in the inside of the microvillus, but not in the terminal web of the epithelial cell. The protein may also be located on the basolateral surface of the cell.     

Anatomical study on the shoot apex ofOsmunda japonica thunb

The ontogenetic and seasonal variations in the organization of the shoot apical meristem ofOsmunda japonica Thunb. were investigated. The meristem is composed of an apical segmentation zone (SZ), a mother cell zone of the stele (MS) and a periphereal zone (PZ). A single apical cell is mostly discernible in all sesons throughout the whole process of ontogeny observed in the present study. The paical cell is usually four-sided, nearly triangular, with a regular segmentation pattern in transverse view. However, it is sometimes acccurately three-sided with a highly regular segmentation pattern in the active season, while it is often four-sided, nearly trapezoid or five-or six-sided, with a less regular segmentation pattern in the inactive season. The size of the apical cell represented by its free surface are increases with the increase in size of the plant body in the young plants. However, in the adult plants, the size of the apical cell is smaller in the active season and larger in the dormant season. The organization pattern of the shoot apical meristen ofO. japonica does not show an intermediate type between the eusporangiate and the leptosporangiate ferns, but the leptosporangiate fern type.     

Comparative development of gametophytes ofOsmunda lancea andO. japonica (osmundaceae): Adaptation of rheophilous fern gametophyte

Development of the gametophytes of a rehophytic fernOsmunda lancea and a related dryland speciesO. japonica was examined, and adaptation ofO. lancea gametophytes to rheophytic habitat was discussed. The spores ofO. lancea were larger in size and contained larger oil droplets than those ofO. japonica. The germination rate was similar. In agar culture,O. lancea gametophytes grew more rapidly and reached reprudctive maturity earlier thanO. japonica, although there was no prominent gross-morphological difference in developing and mature gametophytes. Sporophyte formation ofO. lancea took place at roughly two times higher rate than that ofO. japonica. TheO. lancea gametophytes might be adapted to the periodically flooded habitat by shortening its life, which is a different strategy from that of the sporophytic generation.     

Molecular Determination of Infection Source of a Sporadic Legionella Pneumonia Case Associated with a Hot Spring Bath

To determine the infection source of a sporadic Legionella pneumonia case associated with a hot spring bath, we used five molecular methods, including repetitive element polymerase chain reaction (rep-PCR), arbitrarily primed PCR (AP-PCR), ribotyping, restriction endonuclease analysis (REA), and macrorestriction endonuclease analysis (MREA) by pulsed-field gel electrophoresis. L. pneumophila serogroup (SG) 3 strain EY 3702, isolated from an intratracheal specimen of a 71-year-old Japanese female who developed pneumonia after nearly drowning in a hot spring spa bath, produced rep-PCR and AP-PCR fingerprints identical to those of L. pneumophila SG 3 strains EY 3768 and EY 3769 isolated from the bath water. Four epidemiologically unrelated L. pneumophila SG 3 strains showed different rep-PCR or AP-PCR fingerprints from those of the three EY strains (EY 3702, 3768, and 3769). The three EY strains were also genotypically indistinguishable by ribotyping with EcoRI and PstI, by REA with EcoBI or HindIII, and by MREA with NotI. Based on these results, we identified the bath water of the hot spring spa as the source of infection of this patient, even though the viable number of the organisms in the bath water was low (3 CFU/100 ml) when determined 27 days after her nearly drowning.     

Antimicrobial activities of someN-alkylmaleimides

Summary A variety ofN-alkylmaleimides have been prepared and screened for antimicrobial activity using various fungi, yeasts and bacteria.N-Methyl,N-octyl andN-decylmaleimide showed antifungal activities. All test compounds showed antibacterial activity.     

Detection of the Leghemoglobin Gene on Two Chromosomes of Phaseolus vulgaris by in situ PCR Linked-Fluorescent in situ Hybridization (FISH)

The leghemoglobin (Lb) gene on the metaphase chromosomes ofPhaseolus vulgaris was amplified by in situ PCR. The amplifiedLb gene could be detected on two chromosomes by fluorescentin situ hybridization (FISH) using the short Lb gene probe. (Received January 9, 1998; Accepted April 30, 1998)