Diverse flowering responses subjecting to ambient high temperature in soybean under short-day conditions

Flowering time is one of important agronomic traits determining the crop yield and affected by high temperature. When facing high ambient temperature, plants often initiate early flowering as an adaptive strategy to escape the stress and ensure successful reproduction. However, here we find opposing ways in the short-day crop soybean to respond to different levels of high temperatures, in which flowering accelerates when temperature changes from 25 to 30 °C, but delays when temperature reaches 35 °C under short day. phyA-E1, possibly photoperiodic pathway, is crucial for 35 °C-mediated late flowering, however, does not contribute to promoting flowering at 30 °C. 30 °C-induced up-regulation of FT2a and FT5a leads to early flowering, independent of E1. Therefore, distinct responsive mechanisms are adopted by soybean when facing different levels of high temperatures for successful flowering and reproduction.     

湖南花垣中寒武世晚期至晚寒武世早期牙形石动物群

本文描述了湖南花垣排碧剖面中寒武世晚期至晚寒武世早期牙形石动物群的２个新属８个新种。论述了在中国南部首次建立的湖南花垣中－上寒武统牙形石带与华北和东北南部相应牙形石带的对比依据,概述了中国寒武纪牙石研究的简史和现状。     

基于转录组测序的宁夏枸杞不同品种果实活性成分合成差异表达基因分析

为探究不同品种宁夏枸杞果实活性成分生物合成相关基因的表达水平,筛选关键差异表达基因(differentially expressed genes,DEGs),揭示宁夏枸杞品种间活性成分含量差异的分子机制,本研究采用Illumina NovaSeq 6000高通量测序技术,对宁夏枸杞‘宁杞1号’和‘宁杞7号’青果期、转色期及成熟期果实进行转录组测序,比较2个品种果实不同发育期相关基因表达谱的变化。结果显示:转录组测序共获得811818178条clean reads,有121.76 Gb有效数据。‘宁杞1号’和‘宁杞7号’在青果期、转色期和成熟期差异表达基因分别有2827、2552和2311个;分别有2153、2050和1825个差异基因在基因本体论(gene ontology,GO)、京都基因与基因组百科全书(Kyoto encyclopedia of genes and genomes,KEGG)富集分析和同源蛋白簇(clusters of orthologous groups of proteins,KOG)分析等6个数据库中被成功注释。青果期、转色期和成熟期果实的差异表达基因,在GO数据库分别有1307、865和624个被富集到生物学过程、细胞组分及分子功能3个部分中;KEGG通路富集结果均集中在代谢途径、次生代谢物生物合成和植物-病原互作过程;在KOG数据库,3个发育期分别注释了1775、1751和1541个差异表达基因。对注释的基因进行PubMed数据库检索,在青果期、转色期和成熟期分别筛选到与枸杞活性成分合成相关的差异表达基因18、26和24个,这些基因主要参与类胡萝卜素、类黄酮、萜类、生物碱和维生素等代谢途径。选取7个差异表达基因进行RT-qPCR验证,结果与转录组测序数据表达趋势一致。本研究从转录水平为不同品种宁夏枸杞活性成分含量差异提供了初步证据,为进一步挖掘枸杞活性成分生物合成的关键基因及解析其表达调控机制提供了研究基础。     

生物可降解塑料单体二元羧酸的生物合成研究进展北大核心CSCD

塑料是最重要的聚合物材料之一,需求量巨大,但存在处理困难、污染大等缺点。环境友好型的生物可降解塑料有望成为目前塑料的替代品,以满足社会各界对于塑料制品日益增长的需求。二元羧酸是生物可降解塑料中重要的单体之一,可降解性强,应用广泛,并且可以通过全生物法合成。因此,本文重点选取了几种比较有代表性的二元羧酸,总结它们的生物合成途径以及其代谢改造手段,以期为中长链等复杂二元羧酸的生物法合成提供借鉴。     

Marginal proportional hazards models for clustered interval-censored data with time-dependent covariates

The Botswana Combination Prevention Project was a cluster-randomized HIV prevention trial whose follow-up period coincided with Botswana's national adoption of a universal test and treat strategy for HIV management. Of interest is whether, and to what extent, this change in policy modified the preventative effects of the study intervention. To address such questions, we adopt a stratified proportional hazards model for clustered interval-censored data with time-dependent covariates and develop a composite expectation maximization algorithm that facilitates estimation of model parameters without placing parametric assumptions on either the baseline hazard functions or the within-cluster dependence structure. We show that the resulting estimators for the regression parameters are consistent and asymptotically normal. We also propose and provide theoretical justification for the use of the profile composite likelihood function to construct a robust sandwich estimator for the variance. We characterize the finite-sample performance and robustness of these estimators through extensive simulation studies. Finally, we conclude by applying this stratified proportional hazards model to a re-analysis of the Botswana Combination Prevention Project, with the national adoption of a universal test and treat strategy now modeled as a time-dependent covariate.     

A Rapid Determination of 30 Prohibited Pesticide Residues in Lycii Fructus by UPLC-MS/MS

Prohibited pesticide residues have become one of the main factors affecting the quality and safety of Lycii Fructus, However, rarely studies focus on the rapid determination of these residues. Here, a total of 30 kinds of prohibited pesticide residues were determined by ultra-performance liquid chromatography tandem triple quadrupole mass spectrometry (UPLC-MS/MS) in five different process ways. Pretreatment methods, chromatographic separation and detection conditions in mass spectrometry were all optimized accordingly. Among the five different pretreatment methods, the first and third solid phase extraction failed to provide high recoveries of sulfosulfuron compounds (both lower than 60%). Recovery of chlorphenamidine by the Quick Easy Cheap Effective Rugged and Safe multiresidue method (QuEChERS) was lower than 60%, which did not meet the requirements of trace determination. The concentrations of 30 prohibited pesticides residues treated by straightforward and solid phase extraction showed good linearity in their corresponding ranges, with correlation coefficients over 0.99. The average recoveries of straightforward ranged from 78.13% to 110.9%, while RSD ranged from 1.3% to 16.9%, albeit poor purification was observed. The recovery yield from solid phase extraction was between 67.75% and 103.08% with RSD value from 0.8% to 14.0%, which met the requirements of trace determination, this method has good precision and stability. These results could be employed to other Traditional Chinese Medicines (TCMs) in detecting prohibited pesticide residues.     

仿脑组织体模研究进展

仿脑组织体模是指可以有效模拟人脑组织形状、性质的等效材料组织或数字模型,可以在实验中代表人脑组织的某些生理特性从而达到特定的研究目标,根据其物理形态,通常可分为固体、液体、数字体模3类。仿脑组织体模具有安全经济,配置简单并且可重复使用的优势,被广泛应用于脑部疾病诊断、系统安全性评估等研究。本文就仿脑组织体模的分类、物理特性和脑科学研究应用3方面进行论述,在阐述当前仿脑组织体模与真实脑组织存在一定性质差异的同时也说明其在替代真实脑组织实验上有良好的应用前景。