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101.
102.
Rolf G. Beutel Bo Wang Jing‐Jing Tan Si‐Qin Ge Dong Ren Xing‐Ke Yang 《Cladistics : the international journal of the Willi Hennig Society》2013,29(2):147-165
The relationships of extant and extinct lineages of Adephaga were analysed formally for the first time. Emphasis is placed on the aquatic and semiaquatic groups and their evolution in the Mesozoic. ?Triadogyrus and ?Mesodineutus belong to Gyrinidae, the sister group of the remaining families. ?Triaplidae are the sister group of the following groups (Haliplidae, Geadephaga, Dytiscoidea incl. ?Liadytidae, ?Parahygrobiidae and ?Coptoclavidae [major part]). The lack of a ventral procoxal joint and a very short prosternal process are plesiomorphies of ?Triaplidae. ?Coptoclavidae and ?Timarchopsinae are paraphyletic. ?Timarchopsis is placed in a geadephagan clade. In contrast to other coptoclavids, its metathorax is close to the condition found in Haliplidae, with a complete transverse ridge and coxae with large plates and free mesal walls. ?Coptoclavidae s.str., i.e. excl. ?Timarchopsis, is a dytiscoid subgroup. The mesal metacoxal walls are fused, the coxal plates are reduced, and the transverse ridge is absent. ?Stygeonectes belongs to this dytiscoid coptoclavid unit and is therefore misplaced in ?Timarchopsinae. ?Liadytidae belongs to a dytiscoid subgroup, which also comprises the extant families Aspidytidae, Amphizoidae, Hygrobiidae and Dytiscidae. ?Parahygrobia is the sister group of Hygrobiidae. The larvae are characterized by a broad gula, the absence of the lacinia, retractile maxillary bases and very long urogomphi set with long setae. ?Liadytiscinae is the sister group of extant Dytiscidae. There is no support for a clade ?Eodromeinae and for Trachypachidae incl. ?Eodromeinae. ?Fortiseode is nested within Carabidae. The exclusion of fossil taxa has no effect on the branching pattern. The evolution of Adephaga in the Mesozoic is discussed. Possible reasons for the extinction of ?Coptoclavidae are the rise of teleost fish and the competition of Gyrinidae and Dytiscidae, which possess efficient defensive glands and larval mandibular sucking channels. 相似文献
103.
Background and Aims
Great attention has been paid to N2O emissions from paddy soils under summer rice-winter wheat double-crop rotation, while less focus was given to the NO emissions. Besides, neither mechanism is completely understood. Therefore, this study aimed at evaluating the relative importance of nitrification and denitrification to N2O and NO emissions from the two soils at different soil moisture contentsMethods
N2O and NO emissions during one winter wheat season were simultaneously measured in situ in two rice-wheat based field plots at two different locations in Jiangsu Province, China. One soil was neutral in pH with silt loam texture (NSL), the other soil alkaline in pH with a clay texture (AC). A 15?N tracer incubation experiment was conducted in the laboratory to evaluate the relative importance of nitrification and denitrification for N2O and NO emissions at soil moisture contents of 40 % water holding capacity (WHC), 65 % WHC and 90 % WHC.Results
Higher N2O emission rates in the AC soil than in the NSL soil were found both in the field and in the laboratory experiments; however, the differences in N2O emissions between AC soil and NSL soil were smaller in the field than in the laboratory. In the latter experiment, nitrification was observed to be the more important source of N2O emissions (>70 %) than denitrification, regardless of the soils and moisture treatments, with the only exception of the AC soil at 90 % WHC, at which the contributions of nitrification and denitrification to N2O emissions were comparable. The ratios of NO/N2O also supported the evidence that the nitrification process was the dominant source of N2O and NO both in situ and in the laboratory. The proportion of nitrified N emitted as N2O (P N2O ) in NSL soil were around 0.02 % in all three moisture treatments, however, P N2O in the AC soil (0.04 % to 0.10 %) tended to decrease with increasing soil moisture content.Conclusions
Our results suggest that N2O emission rates obtained from laboratory incubation experiments are not suitable for the estimation of the true amount of N2O fluxes on a field scale. Besides, the variations of P N2O with soil property and soil moisture content should be taken into account in model simulations of N2O emission from soils. 相似文献104.
The encrusting microorganism Lithocodium (type species: Lithocodium aggregatum Elliott), widespread in Late Triassic–Middle Cretaceous shallow-marine carbonates of the Tethys realm, was interpreted in the past as a codiacean green alga, a lituolid foraminifer, calcimicrobial colonies, ulotrichalean green algae, or chambers of boring sponges. A re-study of the type material of L. aggregatum (in the sense of Elliott), stored in the British Museum (Natural History), revealed that this “species” has to be regarded as a calcimicrobial crust, infested by boring sponges (ichnotaxon Entobia). 相似文献
105.
106.
Transmission events are the fundamental building blocks of the dynamics of any infectious disease. Much about the epidemiology of a disease can be learned when these individual transmission events are known or can be estimated. Such estimations are difficult and generally feasible only when detailed epidemiological data are available. The genealogy estimated from genetic sequences of sampled pathogens is another rich source of information on transmission history. Optimal inference of transmission events calls for the combination of genetic data and epidemiological data into one joint analysis. A key difficulty is that the transmission tree, which describes the transmission events between infected hosts, differs from the phylogenetic tree, which describes the ancestral relationships between pathogens sampled from these hosts. The trees differ both in timing of the internal nodes and in topology. These differences become more pronounced when a higher fraction of infected hosts is sampled. We show how the phylogenetic tree of sampled pathogens is related to the transmission tree of an outbreak of an infectious disease, by the within-host dynamics of pathogens. We provide a statistical framework to infer key epidemiological and mutational parameters by simultaneously estimating the phylogenetic tree and the transmission tree. We test the approach using simulations and illustrate its use on an outbreak of foot-and-mouth disease. The approach unifies existing methods in the emerging field of phylodynamics with transmission tree reconstruction methods that are used in infectious disease epidemiology. 相似文献
107.
Martin C. Fischer Christian Rellstab Andrew Tedder Stefan Zoller Felix Gugerli Kentaro K. Shimizu Rolf Holderegger Alex Widmer 《Molecular ecology》2013,22(22):5594-5607
Natural genetic variation is essential for the adaptation of organisms to their local environment and to changing environmental conditions. Here, we examine genomewide patterns of nucleotide variation in natural populations of the outcrossing herb Arabidopsis halleri and associations with climatic variation among populations in the Alps. Using a pooled population sequencing (Pool‐Seq) approach, we discovered more than two million SNPs in five natural populations and identified highly differentiated genomic regions and SNPs using FST‐based analyses. We tested only the most strongly differentiated SNPs for associations with a nonredundant set of environmental factors using partial Mantel tests to identify topo‐climatic factors that may underlie the observed footprints of selection. Possible functions of genes showing signatures of selection were identified by Gene Ontology analysis. We found 175 genes to be highly associated with one or more of the five tested topo‐climatic factors. Of these, 23.4% had unknown functions. Genetic variation in four candidate genes was strongly associated with site water balance and solar radiation, and functional annotations were congruent with these environmental factors. Our results provide a genomewide perspective on the distribution of adaptive genetic variation in natural plant populations from a highly diverse and heterogeneous alpine environment. 相似文献
108.
Mohammad Abdel-Halim Adam B. Keeton Evrim Gurpinar Bernard D. Gary Simon M. Vogel Matthias Engel Gary A. Piazza Frank M. Boeckler Rolf W. Hartmann Ashraf H. Abadi 《Bioorganic & medicinal chemistry》2013,21(23):7343-7356
Derivatives with scaffolds of 1,3,5-tri-substituted pyrazoline and 1,3,4,5-tetra-substituted pyrazoline were synthesized and tested for their inhibitory effects versus the p53+/+ HCT116 and p53?/? H1299 human tumor cell lines. Several compounds were active against the two cell lines displaying IC50 values in the low micromolar range with a clearly more pronounced effect on the p53+/+ HCT116 cells. The compound class shows excellent developability due to the modular synthesis, allowing independent optimization of all three to four key substituents to improve the properties of the molecules. 相似文献
109.
Eeva M. Soininen Virve T. Ravolainen Kari Anne Br?then Nigel G. Yoccoz Ludovic Gielly Rolf A. Ims 《PloS one》2013,8(6)
The ecology of small rodent food selection is poorly understood, as mammalian herbivore food selection theory has mainly been developed by studying ungulates. Especially, the effect of food availability on food selection in natural habitats where a range of food items are available is unknown. We studied diets and selectivity of grey-sided voles (Myodes rufocanus) and tundra voles (Microtus oeconomus), key herbivores in European tundra ecosystems, using DNA metabarcoding, a novel method enabling taxonomically detailed diet studies. In order to cover the range of food availabilities present in the wild, we employed a large-scale study design for sampling data on food availability and vole diets. Both vole species had ingested a range of plant species and selected particularly forbs and grasses. Grey-sided voles also selected ericoid shrubs and tundra voles willows. Availability of a food item rarely affected its utilization directly, although seasonal changes of diets and selection suggest that these are positively correlated with availability. Moreover, diets and selectivity were affected by availability of alternative food items. These results show that the focal sub-arctic voles have diverse diets and flexible food preferences and rarely compensate low availability of a food item with increased searching effort. Diet diversity itself is likely to be an important trait and has previously been underrated owing to methodological constraints. We suggest that the roles of alternative food item availability and search time limitations for small rodent feeding ecology should be investigated.
Nomenclature
Annotated Checklist of the Panarctic Flora (PAF), Vascular plants. Available at: http://nhm2.uio.no/paf/, accessed 15.6.2012. 相似文献110.
MR structural T1-weighted imaging using high field systems (>3T) is severely hampered by the existing large transmit field inhomogeneities. New sequences have been developed to better cope with such nuisances. In this work we show the potential of a recently proposed sequence, the MP2RAGE, to obtain improved grey white matter contrast with respect to conventional T1-w protocols, allowing for a better visualization of thalamic nuclei and different white matter bundles in the brain stem. Furthermore, the possibility to obtain high spatial resolution (0.65 mm isotropic) R1 maps fully independent of the transmit field inhomogeneities in clinical acceptable time is demonstrated. In this high resolution R1 maps it was possible to clearly observe varying properties of cortical grey matter throughout the cortex and observe different hippocampus fields with variations of intensity that correlate with known myelin concentration variations. 相似文献