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961.
An igapó forest near the confluence of Rio Tarumã Mirim (Tarumãzinho) and Rio Negro has been studied. It is a typical ectotroph forest with a raw humus layer and suppressed litter decomposing activity by Higher (i.e., carpophore-producing) Fungi. The number of the latter is about one-fifth of that observed in the (anectotrophic) terra firme forest. All ectotrophically mycorrhizal fungi observed belonged in three families:Amanitaceae, Boletaceae, Russulaceae. Leguminosae are dominant, and of theseAldina latifolia andSwartzia cf.polyphylla were demonstrably ectomycorrhizal. The scarcity of mineral nutrients in the soils of igapó, campinarana and campina is overcome by direct cycling through ectomycorrhizae. This is in contrast to other black- and white-water inundated forest communities in Amazonia.Litter Decomposition and Ectomycorrhiza in Amazonian Forests3. Previous contributions seeSinger & Araujo (1979) andSinger & al. (1983). 相似文献
962.
963.
964.
Li YZ Pan YH Sun CB Dong HT Luo XL Wang ZQ Tang JL Chen B 《Plant molecular biology》2010,74(6):573-590
A cDNA library was constructed from the root tissues of cassava variety Huanan 124 at the root bulking stage. A total of 9,600
cDNA clones from the library were sequenced with single-pass from the 5′-terminus to establish a catalogue of expressed sequence
tags (ESTs). Assembly of the resulting EST sequences resulted in 2,878 putative unigenes. Blastn analysis showed that 62.6%
of the unigenes matched with known cassava ESTs and the rest had no ‘hits’ against the cassava database in the integrative
PlantGDB database. Blastx analysis showed that 1,715 (59.59%) of the unigenes matched with one or more GenBank protein entries
and 1,163 (40.41%) had no ‘hits’. A cDNA microarray with 2,878 unigenes was developed and used to analyze gene expression
profiling of Huanan 124 at key growth stages including seedling, formation of root system, root bulking, and starch maturity.
Array data analysis revealed that (1) the higher ratio of up-regulated ribosome-related genes was accompanied by a high ratio
of up-regulated ubiquitin, proteasome-related and protease genes in cassava roots; (2) starch formation and degradation simultaneously
occur at the early stages of root development but starch degradation is declined partially due to decrease in UDP-glucose
dehydrogenase activity with root maturity; (3) starch may also be synthesized in situ in roots; (4) starch synthesis, translocation,
and accumulation are also associated probably with signaling pathways that parallel Wnt, LAM, TCS and ErbB signaling pathways
in animals; (5) constitutive expression of stress-responsive genes may be due to the adaptation of cassava to harsh environments
during long-term evolution. 相似文献
965.
Hafedh Makni Jamel Daoud Hanène Ben Salah Nedia Mahfoudh Olfa Haddar Héla Karray Tahya Boudawara Abdelmonême Ghorbel Abdelmajid Khabir Mounir Frikha 《Molecular biology reports》2010,37(5):2533-2539
In order to study the association of HLA-A, -B and/or DRB1, DQB1 and the nasopharyngeal carcinoma (NPC), 141 patients affected
with NPC were typed for the HLA class I by serology method of microlymphocytotoxicity. Among these patients 101 were genotyped
for HLA class II system by the PCR-SSP technique. HLA typing results were compared to those of 116 controls. We found that
the HLA-A31 and -A33 antigens were significantly more expressed in patients than in the controls (P = 0.016 and 0.010, respectively) and the HLA-A19 antigen, was significantly more frequent in patients when compared to the
controls (P = 0.007). The HLA-DRB1*03 and DRB1*13 alleles were significantly more frequent in patients as compared to the controls. The
DRB1*01 allele was expressed with a frequency of 20.69% in the controls whereas it was only detected in 3.96% of the NPC patients.
Furthermore, the DQB1*05 allele was expressed at a frequency which was significantly less important in affected patient (P = 0.03), whereas, the DQB1*02 allele was more frequent in patients (P = 0.643 × 10−4). Thus our study revealed a significant increase of HLA-A31, A33, A19, B16, B53 and DRB1*03, DRB1*13 and DQB1*02 alleles
in our patients. These markers could play a predisposing role in the development of NPC. In contrast, a decrease of HLA-B14,
-B35 and DRB1*01 and DQB1*05 alleles was found suggesting a likely protective effect. 相似文献
966.
Sascha Wohnsland Heinrich F. Bürgers Wolfgang Kuschinsky Martin H. Maurer 《Neurochemical research》2010,35(10):1635-1642
Several questions concerning the survival of isolated neurons and neuronal stem and progenitor cells (NPCs) have not been answered in the past: (1) If lactate is discussed as a major physiological substrate of neurons, do neurons and NPCs survive in a glucose-free lactate environment? (2) If elevated levels of glucose are detrimental to neuronal survival during ischemia, do high concentrations of glucose (up to 40 mmol/L) damage neurons and NPCs? (3) Which is the detrimental factor in oxygen glucose deprivation (OGD), lack of oxygen, lack of glucose, or the combination of both? Therefore, in the present study, we exposed rat cortical neurons and NPCs to different concentrations of d-glucose ranging from 0 to 40 mmol/L, or 10 and 20 mmol/L l-lactate under normoxic and anoxic conditions, as well as in OGD. After 24 h, we measured cellular viability by biochemical assays and automated cytochemical morphometry, pH values, bicarbonate, lactate and glucose concentrations in the cell culture media, and caspases activities. We found that (1) neurons and NPCs survived in a glucose-free lactate environment at least up to 24 h, (2) high glucose concentrations >5 mmol/L had no effect on cell viability, and (3) cell viability was reduced in normoxic glucose deprivation to 50% compared to 10 mmol/L glucose, whereas cell viability in OGD did not differ from that in anoxia with lactate which reduced cell viability to 30%. Total caspases activities were increased in the anoxic glucose groups only. Our data indicate that (1) neurons and NPCs can survive with lactate as exclusive metabolic substrate, (2) the viability of isolated neurons and NPCs is not impaired by high glucose concentrations during normoxia or anoxia, and (3) in OGD, low glucose concentrations, but not low oxygen levels are detrimental for neurons and NPCs. 相似文献
967.
Mikkel A. J. Kvasnes Torstein Storaas Hans Chr. Pedersen Svein Bjørk Erlend B. Nilsen 《Ecological Research》2010,25(2):367-374
Different species in a given site or population of a given species in different sites may fluctuate in synchrony if they are
affected similarly by factors such as spatially autocorrelated climate, predation, or by dispersal between populations of
one species. We used county wise time series of hunting bag records of four Norwegian tetraonid species covering 24 years
to examine patterns of interspecific and intraspecific synchrony. We estimated synchrony at three spatial scales; national,
regional (consisting of counties with similar climate), and county level. Ecologically related species with overlapping distributions
exhibited strong synchrony across Norway, but there was much variation between the different regions and counties. Regions
with a long coastline to both the North Sea and the Norwegian Ocean exhibited an overall stronger synchrony than those consisting
of more continental areas. Intraspecific synchrony was generally low across all counties, but stronger synchrony between counties
within regions defined by climatic conditions. Synchrony was negatively related to distance between populations in three of
four species. Only the synchrony in willow ptarmigan showed a clear negative relationship with distance, while the other species
had both strong positive and negative correlations at short distances. Strong interspecific synchrony between some species
pairs within regions and weak intraspecific synchrony across counties within regions suggest a stronger synchronizing effect
from environmental factors such as weather or predation and less effect from dispersal. Our results suggest that the complete
tetraonid community is structured by environmental factors affecting the different species similarly and causes widespread
interspecific synchrony. Local factors affecting the population dynamics nevertheless frequently forces neighbouring populations
out of phase. 相似文献
968.
Background
Natively unfolded proteins lack a well defined three dimensional structure but have important biological functions, suggesting a re-assignment of the structure-function paradigm. To assess that a given protein is natively unfolded requires laborious experimental investigations, then reliable sequence-only methods for predicting whether a sequence corresponds to a folded or to an unfolded protein are of interest in fundamental and applicative studies. Many proteins have amino acidic compositions compatible both with the folded and unfolded status, and belong to a twilight zone between order and disorder. This makes difficult a dichotomic classification of protein sequences into folded and natively unfolded ones. In this work we propose an operational method to identify proteins belonging to the twilight zone by combining into a consensus score good performing single predictors of folding. 相似文献969.
Background
Minisatellites are genomic loci composed of tandem arrays of short repetitive DNA segments. A minisatellite map is a sequence of symbols that represents the tandem repeat array such that the set of symbols is in one-to-one correspondence with the set of distinct repeats. Due to variations in repeat type and organization as well as copy number, the minisatellite maps have been widely used in forensic and population studies. In either domain, researchers need to compare the set of maps to each other, to build phylogenetic trees, to spot structural variations, and to study duplication dynamics. Efficient algorithms for these tasks are required to carry them out reliably and in reasonable time. 相似文献970.
Seil M El Ouaaliti M Fontanils U Etxebarria IG Pochet S Dal Moro G Marino A Dehaye JP 《Purinergic signalling》2010,6(4):405-416
The response to ATP of peritoneal macrophages from wild-type (WT) and P2X7-invalidated (KO) mice was tested. Low concentrations (1–100 μM) of ATP transiently increased the intracellular concentration
of calcium ([Ca2+]i) in cells from both mice. The inhibition of the polyphosphoinositide-specific phospholipase C with U73122 inhibited this
response especially in WT mice suggesting that the responses coupled to P2Y receptors were potentiated by the expression of
P2X7 receptors. One millimolar ATP provoked a sustained increase in the [Ca2+]i only in WT mice. The response to 10 μM ATP was potentiated and prolonged by ivermectin in both mice. One millimolar ATP increased
the influx of extracellular calcium, decreased the intracellular concentration of potassium ([K+]i) and stimulated the secretion of interleukin-1β (IL-1β) only in cells from WT mice. Ten micromolar ATP in combination with
3 μM ivermectin reproduced these responses both in WT and KO mice. The secretion of IL-1β was also increased by nigericin
in WT mice and the secretory effect of a combination of ivermectin with ATP in KO mice was suppressed in a medium containing
a high concentration of potassium. In WT mice, 150 μM BzATP stimulated the uptake of YOPRO-1. Incubation of macrophages from
WT and KO mice with 10 μM ATP resulted in a small increase of YOPRO-1 uptake, which was potentiated by addition of 3 μM ivermectin.
The uptake of this dye was unaffected by pannexin-1 blockers. In conclusion, prolonged stimulation of P2X4 receptors by a combination of low concentrations of ATP plus ivermectin produced a sustained activation of the non-selective
cation channel coupled to this receptor. The ensuing variations of the [K+]i triggered the secretion of IL-1β. Pore formation was also triggered by activation of P2X4 receptors. Higher concentrations of ATP elicited similar responses after binding to P2X7 receptors. The expression of the P2X7 receptors was also coupled to a better response to P2Y receptors. 相似文献