Pain Intensity Recognition Rates via Biopotential Feature Patterns with Support Vector Machines

Background

The clinically used methods of pain diagnosis do not allow for objective and robust measurement, and physicians must rely on the patient’s report on the pain sensation. Verbal scales, visual analog scales (VAS) or numeric rating scales (NRS) count among the most common tools, which are restricted to patients with normal mental abilities. There also exist instruments for pain assessment in people with verbal and / or cognitive impairments and instruments for pain assessment in people who are sedated and automated ventilated. However, all these diagnostic methods either have limited reliability and validity or are very time-consuming. In contrast, biopotentials can be automatically analyzed with machine learning algorithms to provide a surrogate measure of pain intensity.

Methods

In this context, we created a database of biopotentials to advance an automated pain recognition system, determine its theoretical testing quality, and optimize its performance. Eighty-five participants were subjected to painful heat stimuli (baseline, pain threshold, two intermediate thresholds, and pain tolerance threshold) under controlled conditions and the signals of electromyography, skin conductance level, and electrocardiography were collected. A total of 159 features were extracted from the mathematical groupings of amplitude, frequency, stationarity, entropy, linearity, variability, and similarity.

Results

We achieved classification rates of 90.94% for baseline vs. pain tolerance threshold and 79.29% for baseline vs. pain threshold. The most selected pain features stemmed from the amplitude and similarity group and were derived from facial electromyography.

Conclusion

The machine learning measurement of pain in patients could provide valuable information for a clinical team and thus support the treatment assessment.     

HERITABILITY OF NESTLING BEGGING INTENSITY IN THE HOUSE SPARROW (PASSER DOMESTICUS)

Evolutionary theory of parent–offspring conflict assumes that offspring food solicitation behavior, known as begging, and parental response to begging are subjected to selection and coevolution. This assumption implies that begging intensity should be heritable, at least to some degree. Although some studies have suggested that begging is heritable, the evidence for this is rare and mostly indirect. To assess the heritability of begging we used artificial selection, sibling analysis, and the monitoring of begging intensity in four generations of cross-fostered captive house sparrow nestlings. We also contrasted the heritability of begging with that of morphological traits, known to be heritable in this species. Our results show that adult wing length and body mass were heritable as expected. The heritability estimates of the visual and vocal components of nestling begging (standardized for food deprivation and body mass) were low to moderate, as expected for behavioral traits in general, and lower than previously reported for passerine birds. Our sibling analysis shows that common environment had much greater effect on begging than genetic origin, suggesting that begging evolution may be strongly influenced by gene–environment interaction, probably through the mechanisms that adjust begging response to environmental and social conditions.     

Effects of sodium sulfate on the freshwater microalga Chlamydomonas moewusii: implications for the optimization of algal culture media

The study of the microalgal growth kinetics is an indispensable tool in all fields of phycology. Knowing the optimal nutrient concentration is an important issue that will help to develop efficient growth systems for these microorganisms. Although nitrogen and phosphorus are well studied for this purpose, sulfur seems to be less investigated. Sulfate is a primary sulfur source used by microalgae; moreover, the concentration of this compound is increasing in freshwater systems due to pollution. The aim of this study was to investigate the effects of different sodium sulfate concentrations in the culture medium on growth and growth kinetics of the freshwater microalga Chlamydomonas moewusii. Production of biomass, chl content, kinetic equations, and a mathematical model that describe the microalgal growth in relation with the concentration of sodium sulfate were obtained. The lowest concentration of sodium sulfate allowing optimal growth was 0.1 mM. Concentrations higher than 3 mM generated a toxic effect. This work demonstrates that this toxic effect was not directly due to the excess of sulfate ion but by the elevation of the ionic strength. An inhibition model was successfully used to simulate the relationship between specific growth rate and sodium sulfate in this microalga.     

Point of Care Blood Gas and Electrolyte Analysis in Anesthetized Olive Baboons (Papio anubis) in a Field Setting

International Journal of Primatology - Biotelemetry requires animal captures to deploy collars. Capture raises ethical concerns, as field chemical immobilizations are complex procedures, during...     

Crystal structure of the TLDc domain of oxidation resistance protein 2 from zebrafish

The oxidation resistance proteins (OXR) help to protect eukaryotes from reactive oxygen species. The sole C‐terminal domain of the OXR, named TLDc is sufficient to perform this function. However, the mechanism by which oxidation resistance occurs is poorly understood. We present here the crystal structure of the TLDc domain of the oxidation resistance protein 2 from zebrafish. The structure was determined by X‐ray crystallography to atomic resolution (0.97Å) and adopts an overall globular shape. Two antiparallel β‐sheets form a central β‐sandwich, surrounded by two helices and two one‐turn helices. The fold shares low structural similarity to known structures. Proteins 2012. © 2012 Wiley Periodicals, Inc.     

Features of <Emphasis Type=Italic>Bacillus subtilis</Emphasis> IMB B-7023 and its streptomycin-resistant strain

Features of phosphate-mobilizing bacteria Bacillus subtilis IMB B-7023 and its streptomycin-resistant strain were investigated. While cultivated in medium with glucose and glycerophosphate, the growth rate of the antibiotic-marked strain was approximately similar to this parameter for Bacillus subtilis IMB B-7023 but cell sizes were 1.3-fold less. Both strains significantly stimulated the germinating of plant seeds, attached to their roots, and insignificantly differed in antagonistic activity toward phytopathogens and quantitative content of cell fatty acids and phosphatase activity. Streptomycin-resistant strain may be used for monitoring of Bacillus subtilis introduced to agroecosystem.     

Variation of sesquiterpene lactones in Lactuca aculeata natural populations from Israel,Jordan and Turkey

A comparative phytochemical study of seven sesquiterpene lactones in natural populations of the wild lettuce Lactuca aculeata Boiss. (Asteraceae) was performed, based on 23 accessions derived from eight, two, and single localities from Israel, Jordan, and Turkey, respectively. The compounds were profiled and quantified in leaves and roots of the plants, grown from achenes (cypselas) in a greenhouse under controlled conditions, using reverse phase HPLC with on-line photodiode array detector. In the present study, L. aculeata was confirmed as a taxon strongly characterized by four dominant sesquiterpene lactones: 8-deoxylactucin, jacquinelin, crepidiaside B and lactuside A. An analysis of quantitative results of these four constituents led to the following conclusions: (i) the sesquiterpene lactone contents varied significantly, mainly within the populations; however, for two variables (crepidiaside B and lactuside A in root samples) the contents varied mostly between populations, (ii) these differences are likely to be genetically controlled since all accessions were grown under standardized glasshouse conditions. Accessions containing high levels of some sesquiterpene lactones were found in several populations. These traits should be conserved in situ and ex situ and utilized in further research and lettuce improvement.     

Investigation of the H-mode during ECRH in the T-10 tokamak

An improved confinement regime with an external transport barrier (H-mode) is obtained during electron-cyclotron resonance heating of a plasma in the T-10 tokamak. A characteristic feature of this regime is a spontaneous density growth accompanied by a drop in the intensity of D_α line and an increase in β_p by a factor of ～1.6. The threshold power for the L-H transition is close to that predicted by the ITER scaling. The best characteristics of the H-mode are achieved with decreasing q _L to 2.2. It is shown that the external transport barrier arises for electrons, whereas the heat transport barrier insignificantly contributes to improved confinement.     

Suction feeding mechanics, performance, and diversity in fishes

Despite almost 50 years of research on the functional morphologyand biomechanics of suction feeding, no consensus has emergedon how to characterize suction-feeding performance, or its morphologicalbasis. We argue that this lack of unity in the literature isdue to an unusually indirect and complex linkage between themuscle contractions that power suction feeding, the skeletalmovements that underlie buccal expansion, the sharp drop inbuccal suction pressure that occurs during expansion, the flowof water that enters the mouth to eliminate the pressure gradient,and the forces that are ultimately exerted on the prey by thisflow. This complexity has led various researchers to focus individuallyon suction pressure, flow velocity, or the distance the preymoves as metrics of suction-feeding performance. We attemptto integrate a mechanistic view of the ability of fish to performthese components of suction feeding. We first discuss a modelthat successfully relates aspects of cranial morphology to thecapacity to generate suction pressure in the buccal cavity.This model is a particularly valuable tool for studying theevolution of the feeding mechanism. Second, we illustrate themultidimensional nature of suction-feeding performance in acomparison of bluegill, Lepomis macrochirus, and largemouthbass, Micropterus salmoides, two species that represent oppositeends of the spectrum of performance in suction feeding. As anticipated,bluegills had greater accuracy, lower peak flux into the mouth,and higher flow velocity and acceleration of flow than did bass.While the differences between species in accuracy of strikeand peak water flux were substantial, peak suction velocityand acceleration were only about 50% higher in bluegill, a relativelymodest difference. However, a hydrodynamic model of the forcesthat suction feeders exert on their prey shows that this differencein velocity is amplified by a positive effect of the smallermouth aperture of bluegill on force exerted on the prey. Ourmodel indicates that the pressure gradient in front of a fishthat is feeding by suction, associated with the gradient inwater velocity, results in a force on the prey that is largerthan drag or acceleration reaction. A smaller mouth apertureresults in a steeper pressure gradient that exerts a greaterforce on the prey, even when other features of the suction floware held constant. Our work shows that some aspects of suction-feedingperformance can be determined from morphology, but that thecomplexity of the behavior requires a diversity of perspectivesto be used in order to adequately characterize performance.     

Work that body: fin and body movements determine herbivore feeding performance within the natural reef environment

Herbivorous fishes form a keystone component of reef ecosystems, yet the functional mechanisms underlying their feeding performance are poorly understood. In water, gravity is counter-balanced by buoyancy, hence fish are recoiled backwards after every bite they take from the substrate. To overcome this recoil and maintain contact with the algae covered substrate, fish need to generate thrust while feeding. However, the locomotory performance of reef herbivores in the context of feeding has hitherto been ignored. We used a three-dimensional high-speed video system to track mouth and body kinematics during in situ feeding strikes of fishes in the genus Zebrasoma, while synchronously recording the forces exerted on the substrate. These herbivores committed stereotypic and coordinated body and fin movements when feeding off the substrate and these movements determined algal biomass removed. Specifically, the speed of rapidly backing away from the substrate was associated with the magnitude of the pull force and the biomass of algae removed from the substrate per feeding bout. Our new framework for measuring biting performance in situ demonstrates that coordinated movements of the body and fins play a crucial role in herbivore foraging performance and may explain major axes of body and fin shape diversification across reef herbivore guilds.