Kinetic characterization of wild-type and proton transfer-impaired variants of beta-carbonic anhydrase from Arabidopsis thaliana

We have cloned and overexpressed a truncated, recombinant form of beta-carbonic anhydrase from Arabidopsis thaliana. The wild-type enzyme and two site-directed variants, H216N and Y212F, have been kinetically characterized both at steady state by stopped-flow spectrophotometry and at chemical equilibrium by (18)O isotope exchange methods. The wild-type enzyme has a maximal k(cat) for CO2 hydration of 320 ms(-1) and is rate limited by proton transfer involving two residues with apparent pK(a) values of 6.0 and 8.7. The mutant enzyme H216N has a maximal k(cat) at high pH that is 43% that of wild type, but is only 5% that of wild type at pH 7.0. (18)O exchange studies reveal that the effect of the mutations H216N or Y212F is primarily on proton transfer steps in the catalytic mechanism and not in the rate of CO2-HCO3- exchange. These results suggest that residues His-216 and Tyr-212 are both important for efficient proton transfer in A. thaliana carbonic anhydrase.     

Relative placement of the mandibular fossa in great apes and humans

Several researchers have investigated, or commented on, the relative placement of the hominin mandibular fossa with regard to brain expansion and masticatory function. Two confounding factors are identified in this previous work. First, a number of different measurement techniques have been applied, confusing comparisons between studies. Second, the effects of squamous thickening due to temporal bone pneumatization are shown to influence measurements based relative to the ectocranial margin of the skull.To investigate the influence of these factors, a sample of adult human (n=12), chimpanzee (n=12), gorilla (n=15), and orang-utan (n=8) skulls from the Cleveland Museum of Natural History, University of Wisconsin Zoology Museum, and University of Wisconsin Anthropology collections, were CT scanned. Coronal scans were horizontally aligned and measured on a personal computer using ImageJ (NIH). To identify fossa placement, fossa breadth was measured as the projected distance in the coronal plane between the tip of the entoglenoid to lateral margin of the articular surface. A second distance, from the tip of the entoglenoid to a sagittal plane, tangent to the lateralmost margin of the endocranial surface was taken to indicate the extent of medial placement of the fossa. By eliminating the influence of pneumatization, these data unambiguously confirmed the medial placement of the human fossa and show all great apes as having a laterally placed fossa. Similar measurements on three fossil hominins, KNM-BC 1 (Homo sp. indet.), OH 5 and KNM-ER 23000 (Paranthropus boisei) demonstrate that, while all specimens demonstrate a broad fossa, only KNM-BC 1 is characterized by a relatively medial placement while the latter two display lateral placement.     

Spring forward and fall back: dynamics in formation of somite boundaries

Oscillating signaling systems mediate the progressive division of mesoderm into segmental units, termed somites. A recent study using time-lapse analysis in living chick embryos has revealed that the process of somite boundary formation relies on a carefully choreographed series of cell movements, which are both unexpected and surprisingly intricate.     

Thalassiolins A-C: new marine-derived inhibitors of HIV cDNA integrase

Human immunodeficiency virus (HIV) replication requires integration of viral cDNA into the host genome, a process mediated by the viral enzyme integrase. We describe a new series of HIV integrase inhibitors, thalassiolins A-C (1-3), isolated from the Caribbean sea grass Thalassia testudinum. The thalassiolins are distinguished from other flavones previously studied by the substitution of a sulfated beta-D-glucose at the 7-position, a substituent that imparts increased potency against integrase in biochemical assays. The most active of these molecules, thalassiolin A (1), displays in vitro inhibition of the integrase catalyzed strand transfer reaction (IC50=0.4 microM) and an antiviral IC50 of 30 microM. Molecular modeling studies indicate a favorable binding mode is probable at the catalytic core domain of HIV-1 integrase.     

Mice unresponsive to GM-CSF are unexpectedly resistant to cutaneous Leishmania major infection

Granulocyte-macrophage colony-stimulating factor (GM-CSF) has been shown to play a protective role in leishmanial infection. Mice with a null mutation in the gene for the beta common (beta c) chain of the receptors for GM-CSF, interleukin(IL)-3 and IL-5 (beta c-null mice) display normal steady state hemopoiesis and develop lung disease similar to the human condition, alveolar proteinosis, due to a lack of signaling by GM-CSF. We therefore expected to observe a heightened sensitivity to Leishmania major in the beta c-null mice. Surprisingly, the beta c-null mice were more resistant to cutaneous infection than wild-type (wt) mice. Upon intradermal injection of L. major promastigotes, fewer beta c-null mice developed cutaneous lesions than wt mice and these lesions were smaller and healed more rapidly than in wt mice. This resistance to disease was associated with a reduced percentage of in vitro infected beta c-null macrophages. Macrophages from beta c-null mice displayed a more activated phenotype and produced increased amounts of nitric oxide following infection with L. major, both in vivo and in vitro. Paradoxically, however, the parasite burden in the draining lymph nodes was similar in both beta c-null and wt mice, suggesting that at least a subpopulation of cells was susceptible to the parasite. The mechanism preventing normal lesion development remains to be elucidated.