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N Bhutiani CW Kimbrough NC Burton S Morscher M Egger K McMasters 《Biotechnic & histochemistry》2017,92(1):1-6
We introduce a new approach to detect individual microparticles that contain NIR fluorescent dye by multispectral optoacoustic tomography in the context of the hemoglobin-rich environment within murine liver. We encapsulated a near infrared (NIR) fluorescent dye within polystyrene microspheres, then injected them into the ileocolic vein, which drains to the liver. NIR absorption was determined using multispectral optoacoustic tomography. To quantitate the minimum diameter of microspheres, we used both colorimetric and spatial information to segment the regions in which the microspheres appear. Regional diameter was estimated by doubling the maximum regional distance. We found that the minimum microsphere size threshold for detection by multispectral optoacoustic tomography images is 78.9 µm. 相似文献
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Ozgur E Akman James CW Locke Sanyi Tang Isabelle Carré Andrew J Millar David A Rand 《Molecular systems biology》2008,4(1)
A striking and defining feature of circadian clocks is the small variation in period over a physiological range of temperatures. This is referred to as temperature compensation, although recent work has suggested that the variation observed is a specific, adaptive control of period. Moreover, given that many biological rate constants have a Q10 of around 2, it is remarkable that such clocks remain rhythmic under significant temperature changes. We introduce a new mathematical model for the Neurospora crassa circadian network incorporating experimental work showing that temperature alters the balance of translation between a short and long form of the FREQUENCY (FRQ) protein. This is used to discuss period control and functionality for the Neurospora system. The model reproduces a broad range of key experimental data on temperature dependence and rhythmicity, both in wild‐type and mutant strains. We present a simple mechanism utilising the presence of the FRQ isoforms (isoform switching) by which period control could have evolved, and argue that this regulatory structure may also increase the temperature range where the clock is robustly rhythmic. 相似文献
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Organisms use circadian clocks to generate 24‐h rhythms in gene expression. However, the clock can interact with other pathways to generate shorter period oscillations. It remains unclear how these different frequencies are generated. Here, we examine this problem by studying the coupling of the clock to the alternative sigma factor sigC in the cyanobacterium Synechococcus elongatus. Using single‐cell microscopy, we find that psbAI, a key photosynthesis gene regulated by both sigC and the clock, is activated with two peaks of gene expression every circadian cycle under constant low light. This two‐peak oscillation is dependent on sigC, without which psbAI rhythms revert to one oscillatory peak per day. We also observe two circadian peaks of elongation rate, which are dependent on sigC, suggesting a role for the frequency doubling in modulating growth. We propose that the two‐peak rhythm in psbAI expression is generated by an incoherent feedforward loop between the clock, sigC and psbAI. Modelling and experiments suggest that this could be a general network motif to allow frequency doubling of outputs. 相似文献
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Can three incongruence tests predict when data should be combined? 总被引:31,自引:14,他引:17
Advocates of conditional combination have argued that testing for
incongruence between data partitions is an important step in data
exploration. Unless the partitions have had distinct histories, as in
horizontal gene transfer, incongruence means that one or more data support
the wrong phylogeny. This study examines the relationship between
incongruence and phylogenetic accuracy using three tests of incongruence.
These tests were applied to pairs of mitochondrial DNA data partitions from
two well-corroborated vertebrate phylogenies. Of the three tests, the most
useful was the incongruence length difference test (ILD, also called the
partition homogeneity test). This test distinguished between cases in which
combining the data generally improved phylogenetic accuracy (P > 0.01)
and cases in which accuracy of the combined data suffered relative to the
individual partitions (P < 0.001). In contrast, in several cases, the
Templeton and Rodrigo tests detected highly significant incongruence (P
< 0.001) even though combining the incongruent partitions actually
increased phylogenetic accuracy. All three tests identified cases in which
improving the reconstruction model would improve the phylogenetic accuracy
of the individual partitions.
相似文献
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Complete nucleotide sequences of bovine alpha S2- and beta-casein cDNAs: comparisons with related sequences in other species 总被引:2,自引:0,他引:2
Stewart AF; Bonsing J; Beattie CW; Shah F; Willis IM; Mackinlay AG 《Molecular biology and evolution》1987,4(3):231-241
The nucleotide sequences corresponding to bovine alpha S2- and beta- casein
mRNAs have been determined by cDNA analysis. Both sequences appear to be
complete at their 5' ends. The nucleotide sequence of alpha S2-casein, when
compared with the corresponding cavine A sequence, helps to define the
boundaries of a large amino acid repeat (approximately 80 residues) whereas
comparisons with the nucleotide sequences of rat gamma- and mouse
epsilon-casein mRNAs also reveal extensive sequence similarities. An
alignment of these four sequences shows that the divergence of their
translated regions has been characterized by the duplication and deletion
of discrete segments of sequence that probably correspond to exons. A high
degree of nucleotide substitution is also found when the four sequences are
compared, except for well-conserved leader-peptide and phosphorylation-site
sequences and, to a lesser extent, the 5'-untranslated regions. Similar
comparison of the bovine and rat beta-caseins shows that their divergence
has involved a high rate of nucleotide substitution but that no major
insertions or deletions of sequence have occurred. The several splice sites
that have veen defined in the rat beta-casein gene are likely to have been
conserved in the bovine. The contrasting evolutionary histories of the
alpha- and beta-casein coding sequences correlate with the distinctive
functions of these proteins in the casein micelle system in milk.
相似文献
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Nanotoxicity: the growing need for in vivo study 总被引:1,自引:0,他引:1
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This study focuses on the cytotoxic effects of fumonisin B1 (FB1) on both immortalised and immortalised and subsequently transfected normal human bronchial epithelial (NHBE) cells of human
origin using four bioassays. While the MTT, Neutral Red and hexosaminidase colorimetric assays showed little difference between
the toxic effects on the two related cell lines, the clonogenic assay, measuring cell survival and proliferation, indicated
that FB1 had a more toxic effect on the nontransfected cells. This kind ofin vitro approach using cells which retain many characteristics of normal cell growth and differentiation can go some way to developing
evaluation models for food safety in the case of mycotoxin contamination without resorting totally to whole animal testing.
Nevertheless, one or two cytotoxicity tests may be inadequate for a complete appraisal of toxic potential: rather, as wide
a range of methodologies as feasible should be employed initially before meaningful conclusions may be drawn. 相似文献