Dietary analysis across breeding seasons of Eleonora's Falcon Falco eleonorae on the western coast of Algeria

The study of the contents of 318 Eleonora's Falcon Falco eleonorae pellets, collected from three islands off the western coast of Algeria, allowed us to identify 134 prey items. These are divided into 55 families, 21 orders and five classes. These represent 92 insect species, 39 birds, one mammal, one gastropod and one fish. In terms of abundance, insects constituted the main part of the diet (80.7%), followed by birds (18.5%), mammals (0.7%), and fish and gastropods (0.1% each). Among the insects, the Hymenoptera were the most numerous (45.2%), with ants being the most frequent family. In the class of birds, passeriforms were most frequently found (12.3%). The dominant family in the bird class was the Apodidae with a frequency of 5%. In terms of biomass, birds dominated with 98.1% of the total biomass, followed by insects with 1.2%. The diet of these Eleonora Falcons of Algeria was thus diverse, but varied with breeding status. The study of the dietary variation of the Eleonora Falcon during the breeding period shows that insects were most frequently encountered during the three breeding stages, whereas birds were highly consumed during the fledging stage, with frequencies of 43.9%.     

Charge clusters signatures in prokaryotic proteomes: Temperature-dependence and distribution

The identification and the screening of Charged Clusters (CCs) residues in proteins is a key analysis to assess any quantitative structure-function correlation in proteins. Here, we present a proteome wide scan for the occurrence of (CCs) in 99292 proteins using a new tool. Finding Clusters Charge in Protein Sequences Program (FCCP). The FCCP has been employed to search CCs in 35 prokaryotic proteomes (7 Psychrophiles, 10 Mesophiles, 9 thermophiles and for 9 hyperthermophiles). A new repository of 855 CC has been created. Results showed that the mapped proteins containing positive and negative charge clusters are mostly transmembrane proteins while the conserved CCs within the same proteome are transposases or involved in DNA binding and integration. Interestingly, the negative charged cluster was associated to bacteria growth's temperature (p=0.002) acting as proteins' core signature. Taken together the various results provide a consistent picture of these screened CCs in terms of its potentials functional roles.     

Biomass and nutrients in tree root systems–sustainable harvesting of an intensively managed Pinus pinaster (Ait.) planted forest

To develop sources of renewable energy and to reduce greenhouse gas emissions, increasing attention has been given to the extraction of forest biomass, especially in the form of harvest residues. However, increasing the removal of biomass, and hence nutrients, has raised concerns about the sustainability of site fertility and forest productivity. The environmental cost of harvesting belowground biomass is still not fully understood. The objectives of this study were to (i) estimate the stocks of belowground biomass that potentially can be collected; (ii) measure the nutrient (N, P, K, Ca, Mg) concentrations of the different root compartments (stumps, coarse and thin roots); and to (iii) quantify the biomass and nutrient exports under different scenarios, including harvests of above and belowground compartments. The study was carried out on Pinus pinaster stands located in south‐western France. Results showed that roots could be a significant fuelwood resource, particularly at forest clear cutting. Negative relationships between root diameter and root nutrient concentration were observed, independently of root function or tree age. Such relationships can be used to accurately simulate nutrient concentrations in roots as well as nutrient exports. Combining our original results on roots with previously published data on the aboveground compartments showed that nutrient losses were higher in canopy harvest scenarios than in root harvest scenarios. This was mainly due to high nutrient concentrations of needles. We concluded that stump and root harvest could be sustainable in our study context, conversely to foliage harvest. Because thin roots have higher nutrient concentrations than coarse roots and the proportion of thin roots increased with an increase in the distance from the tree, collecting roots only in the close vicinity of the stumps should limit nutrient exports (particularly N) without unnecessarily reducing fuelwood biomass.     

Quantitative Determination of Gymnodimine-A by High Performance Liquid Chromatography in Contaminated Clams from Tunisia Coastline

Quantitative determination by high performance liquid chromatography (HPLC) was performed for gymnodimine-A (GYM-A), a phycotoxin responsible for the contamination of Tunisian clams. This study demonstrates a rapid and reproducible HPLC-ultraviolet (UV) method for extraction, detection and quantification of GYM-A in toxic clams. The extraction of GYM-A from the digestive gland of clams in acetone, subsequent clean-up with diethyl ether and extraction with dichloromethane is the more valid protocol. Chromatography analyses were performed using a gradient of acetonitrile–water (10:90 to 90:10), containing trifluoroacetic acid (0.1%) for 20 min at 1 mL/min rate with a C18 column. Recovery rates exceeded 96%, and limits of detection and quantification were 5 ng/mL and 8 ng/g digestive gland, respectively. Repeatability and reproducibility were tested for various samples containing different levels of GYM-A. A significant correlation was observed between toxicity level of samples and the determined amount of GYM-A. Also, the persistence of GYM-A in contaminated clams from Boughrara lagoon was demonstrated. The kinetics discharge study of GYM-A in controlled medium, during 1 month, showed that the process of depuration was biphasic with an exponential discharge of 75% of the total amount of sequestered GYM-A during the first 12 days followed by a slow discharge (>10%) for the subsequent days up to the seventeenth day. This is the first time that a quantitative study of GYM-A in clams from Tunisian coasts is performed through the development of a new method for detection and quantify of this phycotoxin. We found HPLC-UV a reliable and suitable alternative to the mouse bioassay.     

The marine phycotoxin gymnodimine targets muscular and neuronal nicotinic acetylcholine receptor subtypes with high affinity

Gymnodimines (GYMs) are phycotoxins exhibiting unusual structural features including a spirocyclic imine ring system and a trisubstituted tetrahydrofuran embedded within a 16-membered macrocycle. The toxic potential and the mechanism of action of GYM-A, highly purified from contaminated clams, have been assessed. GYM-A in isolated mouse phrenic hemidiaphragm preparations produced a concentration- and time-dependent block of twitch responses evoked by nerve stimulation, without affecting directly elicited muscle twitches, suggesting that it may block the muscle nicotinic acetylcholine (ACh) receptor (nAChR). This was confirmed by the blockade of miniature endplate potentials and the recording of subthreshold endplate potentials in GYM-A paralyzed frog and mouse isolated neuromuscular preparations. Patch-clamp recordings in Xenopus skeletal myocytes revealed that nicotinic currents evoked by constant iontophoretical ACh pulses were blocked by GYM-A in a reversible manner. GYM-A also blocked, in a voltage-independent manner, homomeric human alpha7 nAChR expressed in Xenopus oocytes. Competition-binding assays confirmed that GYM-A is a powerful ligand interacting with muscle-type nAChR, heteropentameric alpha3beta2, alpha4beta2, and chimeric alpha7-5HT(3) neuronal nAChRs. Our data show for the first time that GYM-A broadly targets nAChRs with high affinity explaining the basis of its neurotoxicity, and also pave the way for designing specific tests for accurate GYM-A detection in shellfish samples.     

2,4-D induction of somaclonal variations in in vitro grown date palm (Phoenix dactylifera L. cv Barhee)

Plant Cell, Tissue and Organ Culture (PCTOC) - The present study is a part of a program designed at improving the date palm, Phoenix dactylifera L. cv. Barhee, through induced somaclonal variation....     

Differential tolerance to iron deficiency of chickpea varieties and Fe resupply effects

The consequences of direct iron deficiency and iron resupply were evaluated during development stages of two Tunisian chickpea varieties (INRAT88 and Chetoui) cultivated in continuously aerated solution with or without 20 muM Fe. The chlorosis score was estimated during culture. Growth parameters, chlorophyll concentration, acidification capacity and Fe concentration were measured every three days during the 21-day treatment. After three weeks of treatment, the chlorosis index was 3-fold higher in Chetoui than in INRAT88, and a considerable decrease of chlorophyll concentration was observed in Chetoui plants since the 6th day of -Fe deprivation. Iron deficiency significantly inhibited whole-plant biomass deposition in both varieties. However, the growth reduction appeared earlier, and was more pronounced in Chetoui than in INRAT88. The whole-plant Fe content decreased dramatically under deficient conditions, and we note an Fe enrichment in shoots at the expense of roots. The sensitivity of Chetoui as compared to INRAT88 was confirmed by the behaviour of resupplied (-Fe/+Fe) plants. In fact, the addition of iron to deficient plants had no significant effect in Chetoui, whereas it led to a total recovery in INRAT88. The capacity of INRAT88 to maintain plant growth and to preserve adequate chlorophyll synthesis under limited iron conditions is related to its better Fe-use efficiency, in addition to its capacity to rapidly recover from this stress.