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31.
Zhang Yi Liang Yi Han Jing Hu Xiaohui Li Xiaojing Zhao Hailiang Bai Longqiang Shi Yu Ahammed Golam Jalal 《Journal of Plant Growth Regulation》2023,42(1):376-389
Journal of Plant Growth Regulation - Photoperiod and micronutrient iron (Fe) are critical for plant growth and development. However, the interactive effects of Fe nutrition and photoperiod on... 相似文献
32.
为了探究三角帆蚌(Hyriopsis cumingii)糖原合成激酶-3β(GSK3β)基因对壳色的影响,研究采用RACE技术获得Hc-GSK3β基因cDNA全长1867 bp,其中包含1261 bp的ORF区编码420个氨基酸, ORF中含有一个S_TKc结构域,该结构域序列高度保守。组织差异表达分析发现Hc-GSK3β基因在紫色蚌鳃、斧足、内脏团和边缘膜组织中表达量高于白色蚌的表达量(P<0.05),且在斧足和边缘膜表达差异水平达到极显著(P<0.01),而在紫色蚌闭壳肌组织中表达量显著低于白色蚌(P<0.05)。原位杂交(ISH)实验结果显示在三角帆蚌外套膜的外褶、中褶、內褶、背膜区和腹膜区均有阳性信号产生,且在外褶的信号表达较强烈。该基因经重测序比较,共鉴定出6个SNP位点,其中在C+185A位点的CA基因型在紫色蚌的分布频率显著高于白色三角帆蚌(P<0.05);在紫色蚌中, T+341G位点TT基因型三角帆蚌内壳颜色参数b值显著低于TG基因型(P<0.05)。研究表明, Hc-GSK3β基因参与了三角帆蚌壳色形成,筛选的SNP标记可用于三角帆蚌壳... 相似文献
33.
Mingzhu Sun Erli Pang Wei-Ning Bai Da-Yong Zhang Kui Lin 《Molecular ecology resources》2023,23(2):499-510
Polyploidy is ubiquitous and its consequences are complex and variable. A change of ploidy level generally influences genetic diversity and results in morphological, physiological and ecological differences between cells or organisms with different ploidy levels. To avoid cumbersome experiments and take advantage of the less biased information provided by the vast amounts of genome sequencing data, computational tools for ploidy estimation are urgently needed. Until now, although a few such tools have been developed, many aspects of this estimation, such as the requirement of a reference genome, the lack of informative results and objective inferences, and the influence of false positives from errors and repeats, need further improvement. We have developed ploidyfrost , a de Bruijn graph-based method, to estimate ploidy levels from whole genome sequencing data sets without a reference genome. ploidyfrost provides a visual representation of allele frequency distribution generated using the ggplot2 package as well as quantitative results using the Gaussian mixture model. In addition, it takes advantage of colouring information encoded in coloured de Bruijn graphs to analyse multiple samples simultaneously and to flexibly filter putative false positives. We evaluated the performance of ploidyfrost by analysing highly heterozygous or repetitive samples of Cyclocarya paliurus and a complex allooctoploid sample of Fragaria × ananassa. Moreover, we demonstrated that the accuracy of analysis results can be improved by constraining a threshold such as Cramér's V coefficient on variant features, which may significantly reduce the side effects of sequencing errors and annoying repeats on the graphical structure constructed. 相似文献
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35.
Xinyue Ye Jian Wang Pengfei Xu Xiaoqian Yang Qixue Shi Genyan Liu Zhaoshi Bai Changlin Zhou Lingman Ma 《Microbial biotechnology》2023,16(9):1755-1773
Polymyxin resistance is conferred by MCR-1 (mobile colistin resistance 1)-induced lipopolysaccharide (LPS) modification of G− bacteria. However, the peptide MSI-1 exerts potent antimicrobial activity against mcr-1-carrying bacteria. To further investigate the potential role of MCR-1 in improving bacterial virulence and facilitating immune evasion, and the immunomodulatory effect of peptide MSI-1, we first explored outer membrane vesicle (OMV) alterations of mcr-1-carrying bacteria in the presence and absence of sub-MIC MSI-1, and host immune activation during bacterial infection and OMV stimulation. Our results demonstrated that LPS remodelling induced by MCR-1 negatively affected OMV formation and protein cargo by E. coli. In addition, MCR-1 diminished LPS-stimulated pyroptosis but facilitated mitochondrial dysfunction, further aggravating apoptosis in macrophages induced by OMVs of E. coli. Similarly, TLR4-mediated NF-κB activation was markedly alleviated once LPS was modified by MCR-1. However, peptide MSI-1 at the sub-MIC level inhibited the expression of MCR-1, further partly rescuing OMV alteration and attenuation of immune responses in the presence of MCR-1 during both infection and OMV stimulation, which can be exploited for anti-infective therapy. 相似文献
36.
Self incompatibility (SI) in Phalaris coerulescens is gametophytically determined by two unlinked multi allelic loci (S and Z). Neither the S nor Z genes have yet been cloned. As part of a map-based cloning strategy, high-resolution maps of the S and Z regions were generated from distorted segregating populations using RFLP probes from wheat, barley, oat, and Phalaris. The S locus was delimited to 0.26 cM with two boundary markers (Xwg811 and Xpsr168) and cosegregated with Xbm2 and Xbcd762. Xbcd266 was the closest marker linked to Z (0.9 cM). A high level of colinearity in the S and Z regions was found in both self-incompatible and -compatible species. The S locus was localized to the subcentromere region of chromosome 1 and the Z locus to the long arm end of chromosome 2. Several rice BAC clones orthologous to the S and Z locus regions were identified. This opens the possibility of using the rice genome sequence data to generate more closely linked markers and identify SI candidate genes. These results add further support to the conservation of gene order in the S and Z regions of the grass genomes. 相似文献
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38.
高原适应过程中大鼠脑内β-内啡肽含量变化的研究 总被引:1,自引:0,他引:1
选用成年雄性Wistar大鼠,由平原(海拔5m,上海)直接运送到高原(2261m,西宁和3460m,天峻)。以放射免疫分折法研究了大鼠在高原24h.急性缺氧期和30d慢性缺氧期中枢脑内β-内啡肽样免疫活性物质(β-EP)的含量变化。结果表明:1.大鼠在两个不同海拔(2261m,3460m)环境24h急性缺氧期与平原对照组相比,脑垂体内β-EP含量降低非常显著(P<0.01),纹状体、丘脑、下丘脑、桥-延脑、海马内β-EP含量均增加非常显著(P<0.01)。2.大鼠在3460m高原30d慢性习服期,垂体及各脑区内β-EP的含量变化呈时相性:即1—3d均呈进行性增加(P<0.01):3-15d呈持续性减少,除中脑、纹状体、丘脑外,均为P<0.01。15-30d垂体、丘脑、皮层、纹状体内β-EP含量仍持续减少(毒体、皮层P<0.01),桥-延脑、下丘脑、海马趋于回升(P<0.01),中脑亦趋于回升(P>0.05)。脑内β-EP的这种变化可能具有十分重要的生物学意义。 相似文献
39.
以Wistar大鼠肝为材料,确立了一个简便的纯化鼠肝DNA甲基化酶的程序,包括:细胞的超声破碎、去内源核酸、硫酸铵盐析、磷酸纤维素亲和层析、DEAE-SephadexA-50柱层析及SephadexG-150凝胶过滤。用不同浓度聚丙烯酰胺凝胶电泳和孔梯度凝胶电泳检测,纯化后的酶已达电泳均一,且酶的比活力提高112倍。以聚丙烯酰胺孔梯度凝胶电泳测得其天然酶的分子量为365kD,以SDS-聚丙烯酰胺凝胶电泳测得该酶有两种亚基,大亚基为95kD,小亚基为85kD,推测该酶由两个大亚基和两个小亚基组成。 相似文献
40.
A reinvestigation of the alphatic nitro-compounds in Astragalus canadensis resulted in the identification of two new esters of glucose with 3-nitropropanoic acid and 5-oxotetrahydrofuran-3-acetic acid, together with six known conjugates of 3-nitropropanoic acid. 1H and 13CNMR data are reported for the new compounds. 相似文献