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71.
Environmental gradients in a southern Europe estuarine system: Ria de Aveiro,Portugal implications for soft bottom macrofauna colonization 总被引:4,自引:0,他引:4
Four seasonal sampling surveys were carried out between December 1985 and September 1986 in Canal de Mira (Ria de Aveiro,
Portugal). A total of 40 sampling stations, distributed over 13 transects, was used. Salinity, temperature, dissolved oxygen
and pH of the water mass were measured. Sediment temperature, and salinity and pH of interstitial water were determined. Sediment
variables also included granulometric composition and organic matter contents. Bottom macrofauna samples were collected at
each station.
Ordination (PCA and MDS) and classification of the sampling stations were performed, using the physicochemical and the biological
data sets separately. Average linkage cluster analysis using the unweighted paired-group method, arithmetic averages, was
used for both sets of data.
With a salinity range from 35.1‰ to 0.0‰, Canal de Mira behaves like a tidally and seasonally poikilohaline estuary. Water
temperature (8.5–24.7°C) decreased along the channel towards its inner part during the cold season; an inverse and more pronounced
trend was observed during the hot season. Dissolved oxygen contents was generally high during the day (50% to 240% saturation).
Oversaturation was observed throughout the growing season, with peaks in areas with large amounts of rooted vegetation. The
pH values, largely correlated with dissolved oxygen, ranged from 6.8 to 8.9. Four types of sediment were present in Canal
de Mira, medium and muddy sands being dominant.
Two major gradients were identified: (i) a typical longitudinal estuarine gradient, associated with distance from the mouth,
representing physicochemical variables such as tidal amplitude, salinity and temperature; this gradient was accompanied by
an upstream increase in dominance; the community composition changes were mainly related to salinity; (ii) a lateral gradient,
related to current velocity, depth and sediment composition; the subtidal community had a comparatively low species richness
and abundance. Groups of stations could be recognized along the environmental gradients. Benthic community changes, however,
appeared to be gradual rather than marked by abrupt transitions. 相似文献
72.
Martine de Boer Maaike te Lintel Hekkert Jiang Chang Bibi S. van Thiel Leonie Martens Maxime M. Bos Marion G. J. de Kleijnen Yanto Ridwan Yanti Octavia Elza D. van Deel Lau A. Blonden Renata M. C. Brandt Sander Barnhoorn Paula K. Bautista-Niño Ilona Krabbendam-Peters Rianne Wolswinkel Banafsheh Arshi Mohsen Ghanbari Christian Kupatt Leon J. de Windt A. H. Jan Danser Ingrid van der Pluijm Carol Ann Remme Monika Stoll Joris Pothof Anton J. M. Roks Maryam Kavousi Jeroen Essers Jolanda van der Velden Jan H. J. Hoeijmakers Dirk J. Duncker 《Aging cell》2023,22(3):e13768
73.
The effect of exogenous RNA on many cellular functions has been studied in a variety of eukaryotic cells but there are few reports on macrophages. In the present study, it is demonstrated that cytoplasmatic RNA extracted from rat macrophages stimulated with Escherichia coli lipopolysaccharide (LPS), referred to as L-RNA, induced the release of TNF-alpha and IL-1 from monolayers of peritoneal resident macrophages. The activity of L-RNA was not altered by polymyxin B but was abolished by ribonuclease (RNase) pretreatment, indicating the absence of LPS contamination and that the integrity of the polynucleotide chain is essential for this activity. Both the poly A(-) and poly A(+) fractions obtained from L-RNA applied to oligo(dT)-cellulose chromatography induced TNF-alpha and IL-1 release. The L-RNA-induced cytokine release was inhibited by dexamethasone and seemed to be dependent on protein synthesis since this effect was abolished by cycloheximide or actinomycin-D. The LPS-stimulated macrophages, when pre-incubated with [5-(3)H]-uridine, secreted a trichloroacetic acid (TCA) precipitable material which was sensitive to RNase and KOH hydrolysis, suggesting that the material is RNA. This substance was also released from macrophage monolayers stimulated with IL-1beta but not with TNF-alpha, IL-6 or IL-8. The substance secreted ((3)H-RNA) sediments in the 4-5S region of a 5-20% sucrose gradient. These results show that L-RNA induces cytokine secretion by macrophage monolayers and support the idea that, during inflammation, stimulated macrophages could release RNA which may further induce the release of cytokines by the resident cell population. 相似文献
74.
da Cunha Cruz Yasmini Scarpa Ana Lívia Martins Díaz Alejandro Sandria Pereira Marcio Paulo de Castro Evaristo Mauro Pereira Fabricio José 《Journal of plant research》2023,136(5):665-678
Journal of Plant Research - Precipitation is an important climatic element that defines the hydrological regime, and its seasonal variation produces annual dry and wet periods in some areas. This... 相似文献
75.
Renata Novakova Jana Bistakova Dagmar Homerova Bronislava Rezuchova Lubica Feckova Jan Kormanec 《DNA sequence》2004,15(3):188-195
We cloned a new polyketide gene cluster, aur2, in Streptomyces aureofaciens CCM3239. Sequence analysis of the 9531-bp DNA fragment revealed 10 open reading frames, majority of which showed high similarity to the previously characterized type II polyketide synthase (PKS) genes. An unusual feature of the aur2 cluster is a disconnected organization of minimal PKS genes; ACP is located apart from the genes for ketosynthases KSalpha and KSbeta. The aur2 gene cluster was disrupted in S. aureofaciens CCM3239 by a homologous recombination, replacing the four genes (aur2A, E, F, G) including ketosynthase KSalpha, with antibiotic resistance marker gene. The disruption did not affect growth and differentiation, and disrupted strain produced spores with wild-type grey-pink pigmentation. The biochromatographic analysis of the culture extracts from S. aureofaciens wild type and aur2-disrupted strains did not reveal any difference in the pattern of antibacterial compounds. 相似文献
76.
77.
Mapping of resistance to the potato cyst nematode Globodera rostochiensis from the wild potato species Solanum vernei 总被引:1,自引:0,他引:1
Jeanne M. E. Jacobs Herman J. van Eck Karin Horsman Paul F. P. Arens Brigitte Verkerk-Bakker Evert Jacobsen Andy Pereira Willem J. Stiekema 《Molecular breeding : new strategies in plant improvement》1996,2(1):51-60
A population of diploid potato (Solanum tuberosum) was used for the genetic analysis and mapping of a locus for resistance to the potato cyst nematode Globodera rostochiensis, introgressed from the wild potato species Solanum vernei. Resistance tests of 108 genotypes of a F1 population revealed the presence of a single locus with a dominant allele for resistance to G. rostochiensis pathotype Ro1. This locus, designated GroV1, was located on chromosome 5 with RFLP markers. Fine-mapping was performed with RAPD and SCAR markers. The GroV1 locus was found in the same region of the potato genome as the S. tuberosum ssp. andigena H1 nematode resistance locus. Both resistance loci could not excluded to be allelic. The identification of markers flanking the GroV1 locus offers a valuable strategy for marker-assisted selection for introgression of this nematode resistance.Abbreviations BSA
bulked segregant analysis
- RAPD
random-amplified polymorphic DNA
- RFLP
restriction fragment length polymorphism
- SCAR
sequence-characterized amplified region 相似文献
78.
Measurements of anther (length, width, depth), pollen grain (percent fertility, polar diameter, equatorial diameter, polar diameter/equatorial diameter ratio, volume) and pistil (stigma length, style length, ovary length, total pistil length, stigma width, style width, ovary width) were taken on 12 diverse sesame (Sesamum indicum L.) genotypes on each of four collection dates in 1994. Highly significant differences among genotype means were obtained for all characters except polar diameter. Highly significant differences among environment (collection date) means were found for ten of the 15 characters measured. Highly significant genotype x environment interactions were obtained for all characters except anther length. For the anther characters measured, relatively high repeatability values were found, ranging from 99.8% for length to 87.6% for depth. For the pollen grain characters measured, the repeatability values ranged from 67.6% for percent fertility to 23.1% for polar diameter. For the pistil characters measured, the repeatability values ranged from 94.0% for style width to 49.6% for total pistil length. These results indicate that genotype and environment influence anther, pollen grain and pistil characters. Variation in some of these morphological aspects could influence the consistency and interpretation of male transmission studies on both the applied and evolutionary levels. 相似文献
79.
Anna Filipek Agnieszka Zasada Urszula Wojda Robert Makuch Renata Dbrowska 《Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology》1996,113(4):745-752
Using a procedure developed to purify calcyclin from mouse Ehrlich ascites tumor cells calcyclin was purified from smooth muscle of chicken gizzard. Chicken gizzard calcyclin bound to phenyl-Sepharose in a calcium dependent manner as did mouse EAT cells and rabbit lung calcyclin but appeared to be more acidic than its mammalian counterparts as revealed by ion exchange chromatography on Mono Q. Chicken gizzard calcyclin bound 45Ca2+ on nitrocellulose filters and exhibited a shift in electrophoretic mobility on urea-PAGE depending on Ca2+ concentration. Crosslinking experiments with BS3 showed that chicken gizzard calcyclin was able to form noncovalent dimers. As indicated by a decrease in maximum tryptophan fluorescence emission of caldesmon (about 14% at 1:1 molar ratio) and displacement of calmodulin from its complex with caldesmon, chicken gizzard calcyclin binds caldesmon. This binding was, however, much weaker than that of calmodulin and could not influence the interaction of caldesmon with actin. In consequence, calcyclin was unable to reverse the inhibitory effect of caldesmon on actin-activated Mg2+-ATPase activity of myosin in the presence of Ca2+. 相似文献
80.
A genetic map of potato (Solanum tuberosum) integrating molecular markers,including transposons,and classical markers 总被引:2,自引:0,他引:2
J. M. E. Jacobs H. J. Van Eck P. Arens B. Verkerk-Bakker B. te Lintel Hekkert H. J. M. Bastiaanssen A. El-Kharbotly A. Pereira E. Jacobsen W. J. Stiekema 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1995,91(2):289-300
A genetic map of potato (Solanum tuberosum L.) integrating molecular markers with morphological and isozyme markers was constructed using a backcross population of 67 diploid potato plants. A general method for map construction is described that differs from previous methods employed in potato and other outbreeding plants. First, separate maps for the female and male parents were constructed. The female map contained 132 markers, whereas the male map contained 138 markers. Second, on the basis of the markers in common the two integrated parental maps were combined into one with the computer programme JoinMap. This combined map consisted of 175 molecular markers, 10 morphological markers and 8 isozyme markers. Ninety-two of the molecular markers were derived from DNA sequences flanking either T-DNA inserts in potato or reintegrated maize transposable elements originating from these T-DNA constructs. Clusters of distorted segregation were found on chromosomes 1,2,8 and 11 for the male parent and chromosome 5 for both parents. The total length of the combined map is 1120 cM. 相似文献