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11.
Alex Gutteridge J. Michael Rukstalis Daniel Ziemek Mark Tié Lin Ji Rebeca Ramos-Zayas Nancy A. Nardone Lisa D. Norquay Martin B. Brenner Kim Tang John D. McNeish Rebecca K. Rowntree 《PloS one》2013,8(2)
We have used a previously unavailable model of pancreatic development, derived in vitro from human embryonic stem cells, to capture a time-course of gene, miRNA and histone modification levels in pancreatic endocrine cells. We investigated whether it is possible to better understand, and hence control, the biological pathways leading to pancreatic endocrine formation by analysing this information and combining it with the available scientific literature to generate models using a casual reasoning approach. We show that the embryonic stem cell differentiation protocol is highly reproducible in producing endocrine precursor cells and generates cells that recapitulate many aspects of human embryonic pancreas development, including maturation into functional endocrine cells when transplanted into recipient animals. The availability of whole genome gene and miRNA expression data from the early stages of human pancreatic development will be of great benefit to those in the fields of developmental biology and diabetes research. Our causal reasoning algorithm suggested the involvement of novel gene networks, such as NEUROG3/E2F1/KDM5B and SOCS3/STAT3/IL-6, in endocrine cell development We experimentally investigated the role of the top-ranked prediction by showing that addition of exogenous IL-6 could affect the expression of the endocrine progenitor genes NEUROG3 and NKX2.2. 相似文献
12.
Daniel Lucas José M. Delgado-García Beatriz Escudero Carmen Albo Ana Aza Rebeca Acín-Pérez Yaima Torres Paz Moreno José Antonio Enríquez Enrique Samper Luis Blanco Alfonso Fairén Antonio Bernad Agnès Gruart 《PloS one》2013,8(1)
A definitive consequence of the aging process is the progressive deterioration of higher cognitive functions. Defects in DNA repair mechanisms mostly result in accelerated aging and reduced brain function. DNA polymerase µ is a novel accessory partner for the non-homologous end-joining DNA repair pathway for double-strand breaks, and its deficiency causes reduced DNA repair. Using associative learning and long-term potentiation experiments, we demonstrate that Polµ−/− mice, however, maintain the ability to learn at ages when wild-type mice do not. Expression and biochemical analyses suggest that brain aging is delayed in Polµ−/− mice, being associated with a reduced error-prone DNA oxidative repair activity and a more efficient mitochondrial function. This is the first example in which the genetic ablation of a DNA-repair function results in a substantially better maintenance of learning abilities, together with fewer signs of brain aging, in old mice. 相似文献
13.
Rebeca Martínez Teresa Núñez de Villavicencio-Díaz Aniel Sánchez Yassel Ramos Jesús Noda Ferro Lázaro Gil González Milagros Méndez Elsa Rodríguez Ernesto Marcos Belinda Sánchez Yordanka Masforrol Hilda Garay Fernando Albericio Lisset Hermida Luis Javier González Eva Vonasek Mario P Estrada Vladimir Besada 《Biochemistry and Biophysics Reports》2016
BackgroundGrowth hormone secretagogues (GHS), among other factors, regulate the release of GH. The biological activity of the secretagogue peptide A233 as a promoter of growth and innate immunity in teleost fish has previously been demonstrated, but its role in the immune system of mammals is not well understood.MethodsThe effect of the peptide was investigated in J774A.2 macrophage cells using a comparative proteomics approach after 6 and 12 h of peptide stimulation.ResultsThe functional analysis of differentially modulated proteins showed that A233 peptide treatment appears to promote activation and ROS-dependent cytotoxic functions in macrophages and enhanced expression of antiviral protein complexes such as MAVS. In accordance with this hypothesis, we found that A233 treatment enhanced superoxide anion production and the IFN-γ level in J774A.2 cells and mouse splenocytes, respectively, and reduced viral load in a dengue virus mouse model of infection.ConclusionsThe growth hormone secretagogue A233 peptide promotes activation of ROS-dependent cytotoxic functions and exerts immunomodulatory effects that enable an antiviral state in a dengue virus mouse model.General SignificanceThe increase of IFN-γ level and the differential modulation of antiviral proteins by the A233 peptide suggest that the molecule could activate an innate immune response with a possible further impact in the treatment of acute and chronic diseases. 相似文献
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Juan Antonio Surez‐Cuenca Rogelio Robledo‐Nolasco Marco Antonio Alcntara‐Melndez Luis Javier Díaz Hernndez Eduardo Vera‐Gmez Alejandro Hernndez‐Patricio Karla Susana Snchez‐Díaz Juan Ariel Buendía‐Gutirrez Alejandra Contreras‐Ramos Atzin Su Ruíz‐Hernndez Rebeca Prez‐Cabeza de Vaca Paul Mondragn‐Tern 《Journal of cellular and molecular medicine》2019,23(7):4844-4849
16.
Sayantani Chatterjee Ling Y. Lee Rebeca Kawahara Jodie L. Abrahams Barbara Adamczyk Merrina Anugraham Christopher Ashwood Zeynep Sumer‐Bayraktar Matthew T. Briggs Jenny H. L. Chik Arun Everest‐Dass Sarah Frster Hannes Hinneburg Katia R. M. Leite Ian Loke Uwe Mginger Edward S. X. Moh Miyako Nakano Saulo Recuero Manveen K. Sethi Miguel Srougi Kathrin Stavenhagen Vignesh Venkatakrishnan Katherine Wongtrakul‐Kish Simone Diestel Peter Hoffmann Niclas G. Karlsson Daniel Kolarich Mark P. Molloy Michael H. Muders Martin K. Oehler Nicolle H. Packer Giuseppe Palmisano Morten Thaysen‐Andersen 《Proteomics》2019,19(21-22)
While aberrant protein glycosylation is a recognized characteristic of human cancers, advances in glycoanalytics continue to discover new associations between glycoproteins and tumorigenesis. This glycomics‐centric study investigates a possible link between protein paucimannosylation, an under‐studied class of human N‐glycosylation [Man1‐3GlcNAc2Fuc0‐1], and cancer. The paucimannosidic glycans (PMGs) of 34 cancer cell lines and 133 tissue samples spanning 11 cancer types and matching non‐cancerous specimens are profiled from 467 published and unpublished PGC‐LC‐MS/MS N‐glycome datasets collected over a decade. PMGs, particularly Man2‐3GlcNAc2Fuc1, are prominent features of 29 cancer cell lines, but the PMG level varies dramatically across and within the cancer types (1.0–50.2%). Analyses of paired (tumor/non‐tumor) and stage‐stratified tissues demonstrate that PMGs are significantly enriched in tumor tissues from several cancer types including liver cancer (p = 0.0033) and colorectal cancer (p = 0.0017) and is elevated as a result of prostate cancer and chronic lymphocytic leukaemia progression (p < 0.05). Surface expression of paucimannosidic epitopes is demonstrated on human glioblastoma cells using immunofluorescence while biosynthetic involvement of N‐acetyl‐β‐hexosaminidase is indicated by quantitative proteomics. This intriguing association between protein paucimannosylation and human cancers warrants further exploration to detail the biosynthesis, cellular location(s), protein carriers, and functions of paucimannosylation in tumorigenesis and metastasis. 相似文献
17.
Arias-Real Rebeca Gutirrez-Cnovas Cayetano Muoz Isabel Pascoal Cludia Menndez Margarita 《Ecosystems》2022,25(4):780-794
Ecosystems - Investigating the influence of biodiversity on ecosystem functioning over environmental gradients is needed to anticipate ecosystem responses to global change. However, our... 相似文献
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Juana Durán-Luz César Antonio Sandoval-Ruiz 《Studies on Neotropical Fauna and Environment》2019,54(1):40-47
We recorded and analyzed the diversity of Phlebotominae and Trichomyiinae in two types of landscape (conserved and anthropized) over the course of three seasons (rainy, cold and dry) in southwestern Puebla, Mexico. A total of 578 specimens belonging to five genera and 10 species were obtained. Phlebotominae was represented by eight species, six of them new records for the state of Puebla, and for Trichomyiinae two species were recorded in the state of Puebla for the first time. There were eight species in the anthropized area and 10 species were recorded in the conservation area. The abundance of both subfamilies was high in the conservation area, representing 83.6% of the total sample, whereas in the anthropized area only 16.4% of the total sample was recorded. Eight species were found during the rainy and dry seasons, and seven species during the cold season. Abundance was highest in the dry season (76.30%), and lowest in the rainy season (5.9%). This kind of information is useful for understanding the transmission patterns of visceral leishmaniasis – endemic to central Mexico – by phlebotomine sand flies. 相似文献
20.
Willian Batista‐Silva David B. Medeiros Accio Rodrigues‐Salvador Danilo M. Daloso Rebeca P. Omena‐Garcia Franciele Santos Oliveira Lilian Ellen Pino Lzaro Eustquio Pereira Peres Adriano Nunes‐Nesi Alisdair R. Fernie Agustín Zsgn Wagner L. Araújo 《Plant, cell & environment》2019,42(2):448-465
Auxin modulates a range of plant developmental processes including embryogenesis, organogenesis, and shoot and root development. Recent studies have shown that plant hormones also strongly influence metabolic networks, which results in altered growth phenotypes. Modulating auxin signalling pathways may therefore provide an opportunity to alter crop performance. Here, we performed a detailed physiological and metabolic characterization of tomato (Solanum lycopersicum) mutants with either increased (entire) or reduced (diageotropica—dgt) auxin signalling to investigate the consequences of altered auxin signalling on photosynthesis, water use, and primary metabolism. We show that reduced auxin sensitivity in dgt led to anatomical and physiological modifications, including altered stomatal distribution along the leaf blade and reduced stomatal conductance, resulting in clear reductions in both photosynthesis and water loss in detached leaves. By contrast, plants with higher auxin sensitivity (entire) increased the photosynthetic capacity, as deduced by higher Vcmax and Jmax coupled with reduced stomatal limitation. Remarkably, our results demonstrate that auxin‐sensitive mutants (dgt) are characterized by impairments in the usage of starch that led to lower growth, most likely associated with decreased respiration. Collectively, our findings suggest that mutations in different components of the auxin signalling pathway specifically modulate photosynthetic and respiratory processes. 相似文献