Patterns of Root Colonization in Epacridaceous Plants Collected from Different Sites

Root colonization was studied in ten species of the Epacridaceaeat three sites in Victoria by morphological and cross-inoculationexperiments. The sites and genera chosen were Cranbourne [Epacrisimpressa Labill. andLeucopogon ericoides(Smith) R. Br.] andRye [L. parviflorus(Andrews) Lindley] on the Mornington Peninsula,and the Grampians[Astroloma conostephioides(Sond.) Benth.,A.humifusum(Cav.) R. Br.,A pinifolium(R. Br.) Benth,Brachylomadaphnoides(Smith) Benth.,E. impressa, E. impressavar.grandifloraBenth.andStyphelia adscendensR. Br.] in western Victoria. For morphologicalstudies, samples of roots from each species at each site werecleared and stained and examined microscopically. For cross-inoculationstudies, cuttings from each site were struck in potting mediuminoculated with soil from the same and other sites. The ericoidmycorrhizae in the roots of plants found at or grown in Cranbourneand Rye soils were similar. Both were significantly differentfrom the internal hyphae found in the roots of plants foundat or grown in Grampians soils, which were three times largerin diameter and formed dense coils which filled the host celland invaded adjacent epidermal cells. This suggests that morethan one fungus is involved in the relationships, that the MorningtonPeninsula sites had a different fungus from the Grampians siteand that host specificity is low. Vesicular structures werealso found commonly on plants at the Grampians site, in contrastwith other sites. Epacridaceae; root; fungus; mycorrhiza; morphology; inoculation     

Comparison of Techniques for the Production of Sclerotinia trifoliorum Ascospores in the Laboratory for Forage Legumes Resistance Tests

This study aimed to improve the production, under controlled conditions, of Sclerotinia trifoliorum ascospores to be used for selection tests on forage legumes. Sclerotia of this fungus, produced in the laboratory, were buried 1–2 cm deep in permanently soaked vermiculite, at T = 15°C, 12/24 h of fluorescent light, air moisture >80% in order to differentiate apothecia. The ascospores were harvested by aspiration and collected on a membrane filter. Various types of apparatus containing sclerotia have been tested for their ability to maintain live apothecia and for the facility of spore catching. The aspiration method has been found to be much more efficient than the previous method of cutting off apothecia. Moreover, it was observed that using this harvesting technique the best apparatus presented small and independent compartments (truncated plastic bottles). The ascospores can be stored, on the membrane filter at 5°C and in dry conditions in order to preserve their germinating abilityfor, a period of 3 months at least. This spore harvesting method permits avaibility of large quantities of a cheap inoculum for S. trifoliorum resistance test on forage legumes all year round.     

L'espace minéral au Paléolithique moyen dans le Sud du Massif central : premiers résultats pétroarchéologiques

The Middle Palaeolithic mineral environment in the South of the Massif Central: preliminary petroarchaeological results. Five Middle-Palaeolithic assemblages coming from archaeological sites in the Haute-Loire and Ardèche dated to isotopic stages 7 to 5 have been studied using a petroarchaeological method based on the optimization of observation techniques at different scales with respect to genetic and postgenetic characteristics of flint raw materials. The method reveals a relatively large collection area for the middle mountain sites (Sainte-Anne I, Baume-Vallée, Le Rond-de-Saint-Arcons, Rochelimagne), but apparently a smaller one for the site of Payre, located nearby the side of the Rhône Valley. For all sites, gathering is predominantly local, but some distant sources are utilised too. The rare exogenous materials, for example the Bedoulian flint from Ardèche identified in the Velay assemblages (Sainte-Anne I, Baume-Vallée) are in fact located in the heart of the massif as well as in secondary deposits and thus do not allow one to establish firm circulation routes for, or certain contact between the relevant human groups. To cite this article: P. Fernandes et al., C. R. Palevol 5 (2006).     

Cadmium uptake in isolated adrenocortical cells of rainbow trout and yellow perch

Cadmium uptake was studied in isolated adrenocortical cells of rainbow trout (Oncorhynchus mykiss) and yellow perch (Perca flavescens) to test the hypothesis that the greater sensitivity of trout cells to Cd-induced disruption of cortisol secretion observed in previous studies is correlated to higher level of metal accumulation. There was no evidence for interspecies differences in accumulation level, and a specific transport mechanism of similar affinity has been characterized in both fish species. However, inhibition of Cd uptake by calcium was observed in rainbow trout exclusively. The free metal ion Cd(2+) and chlorocomplexes CdCl(n)(2-n) both contribute to Cd accumulation with different level of contribution between fish species. We conclude that interspecies differences in sensitivity to Cd endocrine disrupting effect are not necessarily related to different levels of metal accumulation but would rather be linked to transport pathways and metal speciation. Cadmium/calcium competition for uptake could be a determinant of the early Cd-induced impaired cortisol secretion in trout but not perch cells.     

Integrating gene expression and GO classification for PCA by preclustering

Background  

Gene expression data can be analyzed by summarizing groups of individual gene expression profiles based on GO annotation information. The mean expression profile per group can then be used to identify interesting GO categories in relation to the experimental settings. However, the expression profiles present in GO classes are often heterogeneous, i.e., there are several different expression profiles within one class. As a result, important experimental findings can be obscured because the summarizing profile does not seem to be of interest. We propose to tackle this problem by finding homogeneous subclasses within GO categories: preclustering.     

Marfan syndrome-causing mutations in fibrillin-1 result in gross morphological alterations and highlight the structural importance of the second hybrid domain

Mutations in fibrillin-1 result in Marfan syndrome, which affects the cardiovascular, skeletal and ocular systems. The multiorgan involvement and wide spectrum of associated phenotypes highlights the complex pathogenesis underlying Marfan syndrome. To elucidate the genotype to phenotype correlations, we engineered four Marfan syndrome causing mutations into a fibrillin-1 fragment encoded by exons 18-25, a region known to interact with tropoelastin. Biophysical and biochemical approaches, including small angle x-ray scattering, analytical ultracentrifugation, and circular dichroism, were used to study the impact of these mutations upon the structure and function of the protein. Mutations G880S, C862R, and C908R, situated within the second hybrid domain, disrupted the ratio of alpha-helix to beta-sheet leading to a more compact conformation. These data clearly demonstrate the importance of the previously uncharacterized hybrid domain in fibrillin-1 structure. In contrast, mutation K1023N situated within the linker region between the third eight cysteine motif and cbEGF 11 markedly extended the length of the fragment. However, none of the mutations affected tropoelastin binding. The profound effects of all four mutations on fragment conformation suggest that they contribute to the pathogenesis of Marfan syndrome by disrupting protein folding and its assembly into fibrillin-rich microfibrils.     

Quantification of global transcription patterns in prokaryotes using spotted microarrays

We describe an analysis, applicable to any spotted microarray dataset produced using genomic DNA as a reference, that quantifies prokaryotic levels of mRNA on a genome-wide scale. Applying this to Mycobacterium tuberculosis, we validate the technique, show a correlation between level of expression and biological importance, define the complement of invariant genes and analyze absolute levels of expression by functional class to develop ways of understanding an organism's biology without comparison to another growth condition.