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11.
12.
Jorge Assis Nelson Castilho Coelho Filipe Alberto Myriam Valero Pete Raimondi Dan Reed Ester Alvares Serr?o 《PloS one》2013,8(7)
The genetic consequences of living on the edge of distributional ranges have been
the subject of a largely unresolved debate. Populations occurring along
persistent low latitude ranges (rear-edge) are expected to retain high and
unique genetic diversity. In contrast, currently less favourable environmental
conditions limiting population size at such range-edges may have caused genetic
erosion that prevails over past historical effects, with potential consequences
on reducing future adaptive capacity. The present study provides an empirical
test of whether population declines towards a peripheral range might be
reflected on decreasing diversity and increasing population isolation and
differentiation. We compare population genetic differentiation and diversity
with trends in abundance along a latitudinal gradient towards the peripheral
distribution range of
Saccorhiza
polyschides
, a large brown
seaweed that is the main structural species of kelp forests in SW Europe.
Signatures of recent bottleneck events were also evaluated to determine whether
the recently recorded distributional shifts had a negative influence on
effective population size. Our findings show decreasing population density and
increasing spatial fragmentation and local extinctions towards the southern
edge. Genetic data revealed two well supported groups with a central contact
zone. As predicted, higher differentiation and signs of bottlenecks were found
at the southern edge region. However, a decrease in genetic diversity associated
with this pattern was not verified. Surprisingly, genetic diversity increased
towards the edge despite bottlenecks and much lower densities, suggesting that
extinctions and recolonizations have not strongly reduced diversity or that
diversity might have been even higher there in the past, a process of shifting
genetic baselines. 相似文献
13.
Domenico Schillaci Salvatore Petruso Maria Valeria Raimondi Maria Grazia Cusimano Stella Cascioferro Marianna Scalisi 《Biofouling》2013,29(4):433-438
With the goal of discovering new anti-infective agents active against microbial biofilms, this investigation focused on some natural pyrrolomycins, a family of halogenated pyrrole antibiotics. In this study the anti-staphylococcal biofilm activity of pyrrolomycins C, D, F1, F2a, F2b, F3 and of the synthesized related compounds I, II, III were investigated. The susceptibility of six staphylococcal biofilms was determined by methyltiazotetrazolium staining. Most of the compounds were active at concentrations of 1.5 μg ml?1 with significant inhibition percentages. A few of the compounds were active at the lowest screening concentration of 0.045 μg ml?1. The population log reduction of activity against the two best biofilm forming Staphylococcus aureus strains as determined by viable plate counts is also reported. In order to adequately assess the utility of these compounds, their toxicity against human cells was evaluated. It is concluded that pyrrolomycins and synthetic derivatives are promising compounds for developing novel effective chemical countermeasures against staphylococcal biofilms. 相似文献
14.
Paola Ruffa Stefano Raimondi Paolo Boccacci Simona Abbà Anna Schneider 《Tree Genetics & Genomes》2016,12(3):50
A great number of flavored grape varieties, of significant oenological potential, are traditionally cultivated in north-western Italy, besides the renowned “Moscato bianco” (syn. “Muscat à petits grains blancs”). Understanding their origin, besides its historical and scientific interest, would help to increase market appeal and consequently facilitate the commercial exploitation of these products. Twenty-four aromatic genotypes were investigated for their identity, kinship relations, and genetic origins through molecular markers (SSR and SNPs) supported by plant morphology and historical information. Flavored grape genotypes from other regions, possible ancestors, and reference cultivars of known pedigree were also included in the analysis. Kinship analysis used a likelihood-based approach (IBS, IBD, relatedness coefficients, and likelihood ratios) to achieve strong statistical support. The analyses revealed two possible leading genitors, in turn closely related by a parent/offspring relationship: “Moscato bianco” and “Malvasia aromatica di Parma,” a female grape cultivar that is today almost extinct. The outlined molecular and statistical approach could be applied for the investigation on the origin of ancient traditional cultivars of other vegetative propagated species. 相似文献
15.
16.
Georg J. Furtmüller Byoungchol Oh Johanna Grahammer Cheng-Hung Lin Robert Sucher Madeline L. Fryer Giorgio Raimondi W.P. Andrew Lee Gerald Brandacher 《Journal of visualized experiments : JoVE》2016,(108)
In vivo animal model systems, and in particular mouse models, have evolved into powerful and versatile scientific tools indispensable to basic and translational research in the field of transplantation medicine. A vast array of reagents is available exclusively in this setting, including mono- and polyclonal antibodies for both diagnostic and interventional applications. In addition, a vast number of genotyped, inbred, transgenic, and knock out strains allow detailed investigation of the individual contributions of humoral and cellular components to the complex interplay of an immune response and make the mouse the gold standard for immunological research. Vascularized Composite Allotransplantation (VCA) delineates a novel field of transplantation using allografts to replace "like with like" in patients suffering traumatic or congenital tissue loss. This surgical methodological protocol shows the use of a non-suture cuff technique for super-microvascular anastomosis in an orthotopic mouse hind limb transplantation model. The model specifically allows for comparison between established paradigms in solid organ transplantation with a novel form of transplants consisting of various different tissue components. Uniquely, this model allows for the transplantation of a viable vascularized bone marrow compartment and niche that have the potential to exert a beneficial effect on the balance of immune acceptance and rejection. This technique provides a tool to investigate alloantigen recognition and allograft rejection and acceptance, as well as enables the pursuit of functional nerve regeneration studies to further advance this novel field of transplantation. 相似文献
17.
18.
Lopes João Victor Saraiva Raimondi Young Robert John de Azevedo Cristiano Schetini 《Acta ethologica》2019,22(2):113-123
acta ethologica - Chemical pollution of aquatic environments has been increasing in recent times, causing great damage to the ecosystems and to the fishery sector. Pollutants can negatively alter... 相似文献
19.
Li YT Li SC Hasegawa A Ishida H Kiso M Bernardi A Brocca P Raimondi L Sonnino S 《The Journal of biological chemistry》1999,274(15):10014-10018
To understand the reason why, in the absence of GM2 activator protein, the GalNAc and the NeuAc in GM2 (GalNAcbeta1-->4(NeuAcalpha2-->3)Galbeta1-->4Glcbet a1-1'Cer) are refractory to beta-hexosaminidase A and sialidase, respectively, we have recently synthesized a linkage analogue of GM2 named 6'GM2 (GalNAcbeta1-->6(NeuAcalpha2-->3)Galbeta1-->4Glcbet a1-1'Cer). While GM2 has GalNAcbeta1-->4Gal linkage, 6'-GM2 has GalNAcbeta1-->6Gal linkage (Ishida, H., Ito, Y., Tanahashi, E., Li, Y.-T., Kiso, M., and Hasegawa, A. (1997) Carbohydr. Res. 302, 223-227). We have studied the enzymatic susceptibilities of GM2 and 6'GM2, as well as that of the oligosaccharides derived from GM2, asialo-GM2 (GalNAcbeta1-->4Galbeta1--> 4Glcbeta1-1'Cer) and 6'GM2. In addition, the conformational properties of both GM2 and 6'GM2 were analyzed using NMR spectroscopy and molecular mechanics computation. In sharp contrast to GM2, the GalNAc and the Neu5Ac of 6'GM2 were readily hydrolyzed by beta-hexosaminidase A and sialidase, respectively, without GM2 activator. Among the oligosaccharides derived from GM2, asialo-GM2, and 6'GM2, only the oligosaccharide from GM2 was resistant to beta-hexosaminidase A. Conformational analyses revealed that while GM2 has a compact and rigid oligosaccharide head group, 6'GM2 has an open spatial arrangement of the sugar units, with the GalNAc and the Neu5Ac freely accessible to external interactions. These results strongly indicate that the resistance of GM2 to enzymatic hydrolysis is because of the specific rigid conformation of the GM2 oligosaccharide. 相似文献
20.
Sandro Sonnino Paola Brocca Domenico Acquotti Anna Bernardi Laura Raimondi Makoto Kiso Hideharu Ishida Su-Chen Li Yu-Teh Li 《Bioscience reports》1999,19(3):163-168
The conformational properties of GM2, GalNac-4(Neu5Ac-3) Gal-4Glc-1Cer have been compared to those of 6-GM2, in which the linkage between the GalNAc and Gal was altered from GalNac-4Gal- to GalNac-6Gal-, and to those of GD1a, Neu5Ac-3Gal-3GalNAc-4(Neu5Ac-3)Gal-4Glc-1Cer, and GalNAc-GD1a.Our results revealed that unlike the compact and rigid oligosaccharide head group found in GM2, where the Neu5Ac and the GalNAc residues interact, the sugar chain of 6-GM2 is in an open spatial arrangement, with the Neu5Ac no longer interacting with GalNAc, freely accessible to external interactions.The structure of GD1a can be regarded as that of GM2 with an extension of the terminal Neu5Ac-3Gal-disaccharide. The inner portion of GD1a is that of GM2 comprising the very rigid GalNAc-[Neu5Ac-]Gal trisaccharide. The terminal Neu5Ac-Gal linkage is flexible and fluctuates between two limiting conformations. In GalNAc-GD1a the outer sialic acid gains conformational rigidity due to the presence of the outer GalNAc in position 4 of galactose. This ganglioside has two core GalNAc-[Neu5Ac-]Gal trisaccharide linked in tandem. 相似文献