Adaptation and acclimatization to ocean acidification in marine ectotherms: an in situ transplant experiment with polychaetes at a shallow CO2 vent system

Metabolic rate determines the physiological and life-history performances of ectotherms. Thus, the extent to which such rates are sensitive and plastic to environmental perturbation is central to an organism''s ability to function in a changing environment. Little is known of long-term metabolic plasticity and potential for metabolic adaptation in marine ectotherms exposed to elevated pCO₂. Consequently, we carried out a series of in situ transplant experiments using a number of tolerant and sensitive polychaete species living around a natural CO₂ vent system. Here, we show that a marine metazoan (i.e. Platynereis dumerilii) was able to adapt to chronic and elevated levels of pCO₂. The vent population of P. dumerilii was physiologically and genetically different from nearby populations that experience low pCO₂, as well as smaller in body size. By contrast, different populations of Amphiglena mediterranea showed marked physiological plasticity indicating that adaptation or acclimatization are both viable strategies for the successful colonization of elevated pCO₂ environments. In addition, sensitive species showed either a reduced or increased metabolism when exposed acutely to elevated pCO₂. Our findings may help explain, from a metabolic perspective, the occurrence of past mass extinction, as well as shed light on alternative pathways of resilience in species facing ongoing ocean acidification.     

Structural Dynamics and Topology of Phosphorylated Phospholamban Homopentamer Reveal Its Role in the Regulation of Calcium Transport

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Composition,abundance and distribution of holoplanktonic polychaetes within the Strait of Magellan (southern America) in austral summer

This study enlarge the knowledge on species composition, distribution and community structure of pelagic polychaetes on the basis of finely stratified spatial sampling representing austral summer conditions in the Strait of Magellan. Zooplankton samples were collected in late austral summer 1995. A total of 56,489 pelagic polychaete specimens were collected. Eight holopelagic polychaete taxa were recorded in addition to Spionidae and Terebellidae larvae and reproductive stolons of Autolytinae. Pelagobia longicirrata (Lopadorhynchidae) was the most abundant species, representing about 96 % (54,092 specimens, 184.6 ind. 100 m^?3) of all individuals, followed by Tomopteris planktonis (Tomopteridae) at 3 % (1,725 specimens, 5.9 ind. 100 m^?3). The longest measured individuals belonged to T. planktonis, which also showed the largest size range, whereas the smallest individuals belonged to P. longicirrata. Spatial distribution of polychaetes in terms of abundance was not related to bottom depth, but rather the number of taxa was lower in the central part of the Strait. P. longicirrata and T. planktonis were negatively related to chlorophyll a. In addition, the first was negatively related to temperature instead the second was positively affected by salinity. Polychaetes were widely distributed in both epi- and mesopelagic realms, whereas they were almost absent above 80 m depth. Both of the most abundant species were concentrated in the deepest layers sampled (below 100 m) throughout day and night hours without showing any specific migratory behavior.     

Progressive decrease of heart period variability entropy-based complexity during graded head-up tilt.

Complexity (or its opposite, regularity) of heart period variability has been related to age and disease but never linked to a progressive shift of the sympathovagal balance. We compare several well established estimates of complexity of heart period variability based on entropy rates [i.e., approximate entropy (ApEn), sample entropy (SampEn), and correct conditional entropy (CCE)] during an experimental protocol known to produce a gradual shift of the sympathovagal balance toward sympathetic activation and vagal withdrawal (i.e., the graded head-up tilt test). Complexity analysis was carried out in 17 healthy subjects over short heart period variability series ( approximately 250 cardiac beats) derived from ECG recordings during head-up tilt with table inclination randomly chosen inside the set {0, 15, 30, 45, 60, 75, 90}. We found that 1) ApEn does not change significantly during the protocol; 2) all indices measuring complexity based on entropy rates, including ad hoc corrections of the bias arising from their evaluation over short data sequences (i.e., corrected ApEn, SampEn, CCE), evidence a progressive decrease of complexity as a function of the tilt table inclination, thus indicating that complexity is under control of the autonomic nervous system; 3) corrected ApEn, SampEn, and CCE provide global indices that can be helpful to monitor sympathovagal balance.     

Quantitative analysis of soft-bottom polychaetes of the Bellingshausen Sea and Gerlache Strait (Antarctica)

The basin off the Bellingshausen Sea, in contrast to other better known areas such as the Antarctic Peninsula and the Ross and Weddell Seas, has been little investigated due to remoteness and the prevalence of ice for most of the year. The present study focuses on an analysis of polychaetes collected from soft bottoms of this sea and off the west coast of the Antarctic Peninsula (Gerlache Strait) by means of a box-corer (25 × 25 cm) in two intensive surveys carried out during austral summers of 2002–2003 and 2005–2006 (BENTART-03 and BENTART-06). Three different polychaete assemblages were determined from the classification and ordination analyses of sampling stations based on the Bray-Curtis similarity index. One group of stations encompassed the deep stations from the shelf of the Bellingshausen Sea, the second one the shallower stations from the same area and the third one those stations located near the coast of Peter I Island and Gerlache Strait, off the Antarctic Peninsula. The environmental variables involved in segregating these groups were several sedimentary features (redox potential, gravel content) and depth. The present study provides further support to previous ones that considered the shelf of the Bellingshausen Sea as a differentiated region within the Southern Ocean, clearly distinct to the adjacent Weddell and Scott Seas and the Antarctic Peninsula.     

A refinement protocol to determine structure,topology, and depth of insertion of membrane proteins using hybrid solution and solid-state NMR restraints

To fully describe the fold space and ultimately the biological function of membrane proteins, it is necessary to determine the specific interactions of the protein with the membrane. This property of membrane proteins that we refer to as structural topology cannot be resolved using X-ray crystallography or solution NMR alone. In this article, we incorporate into XPLOR-NIH a hybrid objective function for membrane protein structure determination that utilizes solution and solid-state NMR restraints, simultaneously defining structure, topology, and depth of insertion. Distance and angular restraints obtained from solution NMR of membrane proteins solubilized in detergent micelles are combined with backbone orientational restraints (chemical shift anisotropy and dipolar couplings) derived from solid-state NMR in aligned lipid bilayers. In addition, a supplementary knowledge-based potential, E _z (insertion depth potential), is used to ensure the correct positioning of secondary structural elements with respect to a virtual membrane. The hybrid objective function is minimized using a simulated annealing protocol implemented into XPLOR-NIH software for general use. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Biodiversity response to experimental induced hypoxic-anoxic conditions in seagrass sediments

The effects of induced hypoxic-anoxic conditions on the metazoan meiofaunal assemblages and nematode diversity were investigated with an in situ experiment in a Posidonia oceanica meadow. The experiment, of the duration of five months, was performed in three experimental sets of plots. Two of them were enriched with organic matter to induce anoxic conditions (1 set with sucrose and 1 set with sugar plus nutrients, i.e. nitrogen and phosphorus) whereas the last set of plots was kept undisturbed and used as Control. Metazoan meiofauna displayed a fast response to the induced anoxic conditions with an immediate reduction of the richness of taxa (only nematodes and copepods tolerated the hypoxic-anoxic conditions). Nematodes were the most tolerant organisms as their species richness did not change in hypoxic-anoxic conditions, but their species composition and trophic structure displayed significant changes. Some genera (Desmoscolex and Bolbolaimus) were replaced by other (Chromadorella, Sabatiera and Polysigma) more tolerant to the extreme conditions. No significant differences were observed in the Control plots, whereas in treated plots, selective deposit feeders and predators decreased significantly, being replaced by non-selective deposit feeders and epistrate feeders. These results indicate that, events causing a reduction in oxygen availability, can have an impact on the nematode beta-diversity and functional diversity with potential important implications on the benthic food web and functioning of the seagrass systems.     

Effect of habitat fragmentation on the genetic diversity and structure of peripheral populations of beech in Central Italy

Fragmentation can affect the demographic and genetic structure of populations near the boundary of their biogeographic range. Higher genetic differentiation among populations coupled with lower level of within-population variability is expected as a consequence of reduced population size and isolation. The effects of these 2 factors have been rarely disentangled. Given their high gene flow, anemophilous forest trees should be more affected, in terms of loss of genetic diversity, by small population size rather than geographic isolation alone. We studied the impact of distance from the main range (a measure of isolation) and reduced population size on the within-population and among population components of genetic variability. We assayed 11 isozyme loci in a total of 856 individuals in 27 marginal populations of European beech (Fagus sylvatica L.) in Central Italy. Populations were divided into 3 groups with an increasing level of fragmentation. In the most fragmented group, the within-population genetic variability was slightly smaller and the among population differentiation significantly larger than in the other 2 groups. Isolation-by-distance was lost when only pairs of populations involving at least one from the most fragmented group were considered and maintained in the other groups. These results support the role of random genetic drift having a larger impact on the most fragmented group, whereas gene flow seems to balance genetic drift in the 2 less fragmented ones. Given that average distance from the main range is not different between the intermediate and the most fragmented group, but average population size is smaller, we can conclude that gene flow is effective, even at relatively long distances, in balancing the effect of fragmentation if population size is not too small.