Total Hourglass Control - A Robust Finite Element Formulation for the Calculation of Organ Deformations

For use in a virtual reality based laparoscopic surgery simulator methods have been developed to model the mechanical behavior of soft tissue. Explicit Finite Element analysis turned out to be a robust basis when the approximation of hyperelastic materials is used. To reduce calculation times reduced volume integration schemes were applied, where classical hourglass control leads to drastic errors which make a simulation expanding over a long period of time impossible. Therefore, the total hourglass control scheme was developed and is presented here for several material laws. This new formulation takes the existence of the elastic potential of a hyperelastic material into account and leads to robust simulations without loss of accuracy. This is demonstrated with the off-line simulation of a model of an uterus and its adnexe.     

Fishes collected by the Zaire River Expedition, 1974-75

An annotated list of the fishes collected by the Zaire River Expedition, October 1974 -January 1975, is presented, and five new species are described. The majority of the collections came from the River Lualaba and associated water bodies and provide new information on the distribution of die ichthyofauna in the Zaire basin. A re-examination of the available geomorphological and zoogeographical evidence failed to substantiate the hypothesis that the upper Lualaba was formerly a tributary of the Nile.     

Urine — a source for noninvasive genetic monitoring in wildlife

Noninvasive samples are of increasing importance to study wild populations. In this study, we investigate the applicability of urine samples as the sole source of DNA for routine noninvasive genetic monitoring of wildlife using wolves (Canis lupus) as an example. Within the scope of a long‐term wolf population survey, we collected during winter snow tracking in Bieszczady Mountains, Poland 41 urine samples considered as utilizable for genetic analyses. DNA concentration was determined by quantitative real‐time polymerase chain reaction (qPCR) and six microsatellite loci were genotyped in threefold repeated genotyping experiments to assess the reliability of genetic analyses of urine. DNA concentration of 33 urine samples was successfully quantified and of 14 samples, we obtained congruent results for all analysed loci and all repeated genotyping experiments. The gender of urine samples was identified with a Y‐chromosome‐linked marker. Considering the high discovery rate of urine in conjunction with its genotype reliability, our study confirms that urine is a valuable source in noninvasive genetic monitoring. Additionally, preselection of samples via qPCR proved to be a powerful tool contributing to a beneficial cost‐value ratio of genetic analyses by minimizing genotyping errors.     

Genetic differentiation between populations of the European rose hip fly Rhagoletis alternata

We tested for genetic differentiation between populations of Rhagoletis alternata Fall. (Diptera: Tephritidae) on three different host species. We collected larvae from three rose species of the section Caninae ( Rosa canina L., Rosa corymbifera Borkh . , and Rosa rubiginosa L.) from 15 sites across Germany, where the three roses occurred together. Additionally, we sampled three sites in Switzerland. Roses differ in morphology (e.g. leaf glands) as well as phenology. We were able to score nine allozyme loci (five polymorphic). Populations from the three hosts did not differ in genetic variability. We found significant genetic differentiation between populations from different host species. However, the differentiation was very low (0.9%). Hence, we found no indication for host races. Furthermore, surprisingly little geographical structure of genetic differentiation was found between populations of this fruit fly across central Europe. We offer three mutually non-exclusive explanations for these findings. First, gene flow between populations of Rh. alternata is high. Second, the pattern of genetic differentiation is based on a recent expansion of the distributional range . Third, the ongoing gene flow between roses of the section Caninae acts as a hybrid bridge.  © 2007 The Linnean Society of London, Biological Journal of the Linnean Society , 2007, 90 , 619–625.     

Development of a stable isotope index to assess decadal-scale vegetation change and application to woodlands of the Burdekin catchment, Australia

Forty-four study sites were established in remnant woodland in the Burdekin River catchment in tropical north-east Queensland, Australia, to assess recent (decadal) vegetation change. The aim of this study was further to evaluate whether wide-scale vegetation ‘thickening’ (proliferation of woody plants in formerly more open woodlands) had occurred during the last century, coinciding with significant changes in land management. Soil samples from several depth intervals were size separated into different soil organic carbon (SOC) fractions, which differed from one another by chemical composition and turnover times. Tropical (C₄) grasses dominate in the Burdekin catchment, and thus δ¹³C analyses of SOC fractions with different turnover times can be used to assess whether the relative proportion of trees (C₃) and grasses (C₄) had changed over time. However, a method was required to permit standardized assessment of the δ¹³C data for the individual sites within the 13 Mha catchment, which varied in soil and vegetation characteristics. Thus, an index was developed using data from three detailed study sites and global literature to standardize individual isotopic data from different soil depths and SOC fractions to reflect only the changed proportion of trees (C₃) to grasses (C₄) over decadal timescales. When applied to the 44 individual sites distributed throughout the Burdekin catchment, 64% of the sites were shown to have experienced decadal vegetation thickening, while 29% had remained stable and the remaining 7% had thinned. Thus, the development of this index enabled regional scale assessment and comparison of decadal vegetation patterns without having to rely on prior knowledge of vegetation changes or aerial photography.     

The importance of the littoral epiphyton as food for commercial fish in the recent African man-made lake, Nyumba ya Mungu reservoir, Tanzania

Nyumba ya Mungu reservoir is a man-made lake in the Kilimanjaro region of northern Tanzania. The commercial fisheries are principally based on the cichlids, Sarotherodon pangani Lowe, S. jipe Lowe, S. esculentus Graham, and Tilapia rendalli Boulenger.
Examination of gut contents revealed that the dominant species, S. pangani and S. jipe , fed on the epiphyton attached to the vegetation in the littoral zone, S. esculentus was a phytoplankton filter feeder, and T. rendalli consumed macrophytes and associated epiphytes.
A fish exclosure quantitatively demonstrated that the epiphyton community was appreciably depleted by the grazing of fish. After 35 days the mean epiphyton density on the submerged surfaces of Cyperus articulatus L. within the exclosure was 285 times 10³ individuals cm^-2 shoot, but only 181 times 10³ individuals cm^-2 shoot on grazed surfaces outside the exclosure. The differences were statistically significant, and corresponded to a difference in biomass of about 6.5 g organic dry weight m^-2 lake surface. Vertical profiles of periphyton density on Cyperus indicated that fish grazed mainly below a depth of 100 mm from the water surface.
The littoral epiphyton → commercial fish food chain, which may be unique, is considered to predominate in Nyumba ya Mungu, and is compared with the major food chains of commercial fish in some other African natural and man-made lakes.     

First nest description, breeding behaviour and distribution of the Madagascar Serpent-Eagle Eutriorchis astur

The critically endangered, endemic Madagascar Serpent-Eagle Eutriochis astur was searched for and studied from 1993-98 on Masoala Peninsula, northeastern Madagascar. Fifteen individual serpent-eagles were detected at nine different localities throughout the Masoala Peninsula. The first nest of the Madagascar Serpent-Eagle was discovered on 7 November 1997. The nest was in an epiphytic fern Asplenium nidus supported by vines and branches, 20.1 m above the ground in a Potameia capuroni of 36.2 cm diameter at breast height. The epiphytic fern was lined with leaves in the centre and twigs were positioned to form a nest rim. The nest measured 76 times 57 cm and contained one white egg. The female and male incubated for 77% and 21% of 118 hours of nest observations, respectively. The egg hatched on 21 November 1997, and the young fledged 62 days later on 22 January. Chameleons Furcifer and Calumma spp., and leaf-tailed geckos Uroplatus sp., made up the most numerous prey types taken, representing 83% of the 133 identified prey. Currently, the Masoala Peninsula forest contains the greatest number of sightings and known density of serpent-eagles in Madagascar.     

Phylogeny of Trichomonads Based On Partial Sequences of Large Subunit Rrna and On Cladistic Analysis of Morphological Data

ABSTRACT. Several domains of large subunit rRNA from nine trichomonad species have been sequenced. Molecular phylogenies obtained with parsimony and distance methods demonstrate the trichomonads are a monophyletic group which branches very early in the eukaryotic tree. the topology of the trees is in general agreement with traditional views on evolutionary and systematic relationships of trichomonads. A clear dichotomy is noted between the subfamily Trichomonadinae and the subfamily Tritrichomonadinae. In the latter subfamily, a second division separates the " Tritrichomonas muris -type" species from the " Tritrichomonas augusta -type" ones. Previous evolutionary schemes in which the Monocercomonadidae were regarded as the most "primitive" and the Trichomonadidae as more "evolved" are not in agreement with our molecular data. the emergence of Monocercomonas and Hypotrichomonas at the base of the Tritrichomonas lineage suggests a secondary loss of some cytoskeletal structures, the costa and undulating membrane in these genera. This is corroborated by the early branching position of Trichomitus. which possesses a costa and an undulating membrane and has usually been placed among the Trichomonadidae on the basis of cytological characters. A cladistic analysis was applied to the available morphological characters in order to produce a hierarchical grouping of the taxa reflecting their morphological diversity. Supplementary key words. Evolution, molecular phylogeny, morphological cladistic analysis.     

The Anchorage of Leek Seedlings: The Effect of Root Length and Soil Strength

The mechanical behaviour of single roots being extracted fromsoil was modelled as a process in which tension is transferredfrom the upper regions of the root to the soil via shear. Quantitativepredictions were made about the extraction forces and the shapeof the uprooting curves, and these were tested using leek radiclesof different lengths in soil of two different strengths. Results of uprooting tests were qualitatively similar to thepredictions. The pullout resistance rose with root length, untilthe breaking strength of the root was reached, at around 30mm: longer roots all broke before the tip was stressed. In wholeroot systems, therefore, failure will occur proximally beforethe line distal roots are mechanically stressed, so these canhave no anchorage function. Resistance to an upward force will be most economically achievedby having many strengthened proximal root axes, as in the adventitiousroot systems of grasses, sedges and stoloniferous dicots. Allium porrum, root, anchorage, shear, tension, soil