Argali Abundance in the Afghan Pamir Using Capture–Recapture Modeling From Fecal DNA

Abstract: Estimating population size in a mark-recapture framework using DNA obtained from remotely collected genetic samples (e.g., feces) has become common in recent years but rarely has been used for ungulates. Using DNA extracted from fecal pellets, we estimated the size of an argali (Ovis ammon) population that was believed to be isolated from others within the Big Pamir Mountains, Afghanistan, an area where access was difficult and expensive. We used closed-capture models to estimate abundance, and Pradel models to examine closure assumptions, both as implemented in Program MARK. We also made visual counts of argali in the Big Pamirs, allowing comparison of count indices of abundance with modeled estimates. Our model-averaged estimate for female argali in the Big Pamir was 172 (95% CI = 117–232), which was about 23% higher than our best assessment using uncorrected visual counts. However, mark-recapture models suggested that males were not a closed population; thus, we were unable to provide a meaningful estimate of overall population size. Males either suffered much higher mortality than females during the sampling period, or, more likely, males moved in and out of the Big Pamir area. Although information from DNA did not provide a clear overall population estimate, it suggested that the Big Pamir was not isolated from other argali populations, which could not have been confirmed with visual observations alone. Estimating argali population size using mark-recapture models and fecal DNA is feasible but may be too expensive for frequent monitoring of large and remote populations. Our study demonstrates the importance of sex identification and separate abundance estimation for each sex, especially if movement ecology differs by sex.     

Clutch size manipulation, hatching success and offspring phenotype in the ball python (Python regius)

In a diverse array of avian and mammalian species, experimental manipulations of clutch size have tested the hypothesis that natural selection should adjust numbers of neonates produced so as to maximize the number of viable offspring at the end of the period of parental care. Reptiles have not been studied in this respect, probably because they rarely display parental care. However, females of all python species brood their eggs until hatching, but they do not care for their neonates. This feature provides a straightforward way to experimentally increase or reduce clutch size to see whether the mean clutch size observed in nature does indeed maximize hatching success and/or optimize offspring phenotypes. Eggs were removed or added to newly laid clutches of Ball Pythons ( Python regius ) in tropical Africa (nine control clutches, eight with 50% more eggs added, six with 42% of eggs removed). All clutches were brooded by females throughout the 2-month incubation period. Experimental manipulation of clutch-size did not significantly affect the phenotypes (morphology, locomotor ability) of hatchlings, but eggs in 'enlarged' clutches hatched later, and embryos were more likely to die before hatching. This mortality was due to desiccation of the eggs, with females being unable to cover 'enlarged' clutches sufficiently to retard water loss. Our results support the notion of an optimal clutch size, driven by limitations on parental ability to care for the offspring. However, the proximate mechanisms that generate this optimum value differ from those previously described in other kinds of animals. © 2003 The Linnean Society of London . Biological Journal of the Linnean Society 2003, 78 , 263–272.     

新西兰霍克湾普卡瓦湖岩芯植硅体分析所揭示的火山喷发事件后的植被变化

含火山灰层沉积的植硅体分析为了解植被对从空中下降的火山灰的反应提供新的信息。新西兰霍克湾的一个深197m钻孔的上部50m样品,提供了距今约50ka以来连续的植被记录。植硅体组合在4个主要的火山灰层都发生了明显的变化,表现在树木和灌木的急剧下降及禾草类和莎草科的繁盛。在每次火山灰降落后,都会有一系宁继后变化,木本类最早死亡,禾草类和莎草科取而代之,并很快占据裸露的地表。经过一个相当长的滞后时间,树木和／或灌木重新替代草本和莎草科。     

Concerning invasive species: Reply to Brown and Sax

Abstract Biological invasions have commonly occurred, and to a lesser degree continue to do so, without human assistance. It is, however, a combination of the rate and magnitude, as well as the distances and agency involved, that separates human‐driven invasion processes from self‐perpetuated colonization events. Exotic species are a pervasive and major component of human‐induced global change. Decisions to manage invasive species will require judgements to be communicated from scientists to policy makers, because scientists may often be the only ones in the position to make them.     

Does intraspecific niche partitioning in a native predator influence its response to an invasion by a toxic prey species?

Abstract The introduced and highly toxic cane toad (Bufo marinus) is rapidly spreading across northern Australia where it may affect populations of large terrestrial vertebrate predators. The ecological impact of cane toads will depend upon the diets, foraging modes and habitat use of native predators, and their feeding responses to cane toads. However, intraspecific niche partitioning may influence the degree of vulnerability of predators to toxic prey, as well as the time course of the impact of alien invaders on native species. We studied the diet of the northern death adder Acanthophis praelongus and their feeding responses to cane toads. In the laboratory, death adders from all size classes and sexes readily consumed frogs and cane toads. Diets of free ranging A. praelongus from the Adelaide River floodplain were more heterogeneous. Juvenile snakes ate mainly frogs (39% of prey items) and small scincid lizards (43%). Both sexes displayed an ontogenetic dietary shift from lizards to mammals, but adult males fed on frogs (49%) and mammals (39%) whereas adult females (which grew larger than males) fed mainly on mammals (91%) and occasionally, frogs (9%). Feeding rates and body condition of adult snakes varied temporally and tracked fluctuations in prey availability. These results suggest that cane toads may negatively affect populations of northern death adders in the Darwin region. However, we predict that different size and sex classes of A. praelongus will experience differential mortality rates over different timescales. The initial invasion of large toads may affect adult males, but juveniles may be unaffected until juvenile toads appear the following year, and major affects on adult female death adders may be delayed until annual rainfall fluctuations reduce the availability of alternative (rodent) prey.     

The management of crop structure: a general approach to reversing the impacts of agricultural intensification on birds?

Agricultural intensification is accepted widely as a cause of bird population declines on farmland in Europe and North America. Although intensification is multivariate, one common theme is the impact on variation in crop structure, both within and between fields. Intensification creates simpler, more homogeneous and denser swards in both tillage crops and grassland. This influences predation risk, exposure to weather extremes and the diversity, abundance and accessibility of food. Birds trade off these pressures in different ways, so that the more uniform and dense the vegetation, the fewer the number of birds and range of species that are able to nest and forage successfully. Reversing recent trends towards dense, simplified and homogeneous swards will improve nesting and foraging habitat conditions for a wide range of species across farming systems, and may represent a cost-effective mechanism for the further improvement of agri-environment scheme options designed to assist the recovery of farmland bird populations.     

Non-inversion tillage and farmland birds: a review with special reference to the UK and Europe

This paper reviews the current knowledge of the effects of non-inversion tillage (NIT) on farmland birds and their food resources. NIT is a method of establishing a crop without using a mouldboard plough and is becoming increasingly popular in the UK. NIT generally disturbs the soil to shallower depths than conventional tillage and is therefore expected to have beneficial effects on biodiversity on arable land as compared with mouldboard ploughing. The diets of farmland birds change throughout the year, and many species take invertebrates over the breeding season. Seeds are also important for many species of farmland birds throughout the year and especially over the winter months. The effects of NIT on these farmland bird food resources, in particular ground beetles (Coleoptera: Carabidae), spiders (Arachnida: Araneae), earthworms (Annelida) and seeds (arable weeds and cereal crops) are reviewed.