Cysteine based novel noncompetitive inhibitors of urease(s)--distinctive inhibition susceptibility of microbial and plant ureases

Based on the catalysis mechanism of urease, a homologous series of 10 cysteine derivatives (CysDs) was designed and synthesized, and their inhibitory activities were evaluated for microbial ureases (Bacillus pasteurii, BPU, and Proteus mirabilis, PMU) and for a plant urease [jack bean (Cavavalia ensiformis), JBU]. As already described, thiol-compounds might inhibit urease activity by chelating the nickel atoms involved in the catalysis process. In contrast to cysteine, which has been reported to be a very weak urease inhibitor, we verified a potential inhibitory activity of these CysDs. The kinetic data demonstrate that thiol derivatives are more effective than the respective thioether derivatives. Besides, thiol-CysDs had a reduced activity in acidic pH (5.0). Lineweaver-Burk plots indicated that the nature of inhibition was of noncompetitive type for all 10 compounds, with the minimum Ki value of 2 microM for N,N-dimethyl L-cysteine. It is proposed that these classes of compounds are more potent inhibitors of the bacterial ureases, compared with the plant-originated urease. Since microbial urease is directly involved in the infection process of many pathological organisms, this work demonstrates that thiol-CysDs represent a class of new potential urease inhibitors.     

Studies on the Redox Characteristics of Ferrioxamine E

Thermodynamic parameters for the reduction of ferrioxamine E as calculated from redox potentials determined at four different temperatures were found to be ΔH ^≠ =7.1±3.4 kJ mol^?1 and ΔS^≠=?146 J mol^?1 K^?1. The negative entropy value is large, because the decrease in the charge at the metal center and an increase in its ionic radius force the structure of the complex to become less rigid and resemble the desferrisiderophore. The hydrophilic groups of the system are now (relatively more) available for solvent interaction. Thus, a large negative entropy change accompanies the reduction of the complex. Kinetics of reduction of ferrioxamine by V^II, Cr^II, Eu^II, and dithionite were measured at different temperatures and by dithionite at different pH values. The Cr^II and Eu^II reactions proceed by an inner‐sphere mechanism and have second‐order rate constants at 25° of 1.37×10⁴ and 1.23×10⁵ M ^?1 s^?1, respectively. For the V^II reduction, the corresponding rate constant was 1.89×10³ M ^?1 s^?1. The activation parameters for the V^II reduction were ΔH^≠ = 8.3 kJ mol^?1; ΔS^≠ = ?154 J mol^?1 K^?1. These values are indicative of an outer‐sphere mechanism for V^II reduction. The reduction by dithionite is half order in dithionite concentration indicating that SO ^. is the sole reducing species. log of reduction rate constants of different trihydroxamates by this reductant were correlated with their respective redox potentials, and the variation was found to be in approximate correspondence with the expectations of Marcus relationship.     

Continuous fill intermittent decant type sequencing batch reactor application to upgrade the UASB treated sewage

The performance of continuous flow intermittent decant type sequencing batch (CFID) reactor treating the effluent of an UASB reactor treating domestic wastewater and operated at 8 h hydraulic retention time (HRT) was investigated. The CFID was operated at three different HRTs (22, 8 and 6 h) and three different dissolved oxygen (DO) patterns (<0.5, 2.5–3.5 and 3.5–4.5 mg/L). The highest effluent quality was observed at the 8 h HRT and 2.5–3.5 mg/L DO concentration. At this operational condition, the average BOD, TSS, ammonia nitrogen and fecal coliform removal efficiencies were 83, 90, 74 and 99 %, respectively. The CFID is a promising post-treatment option for existing UASB systems, with a final effluent quality that comply with receiving water and effluent reuse criteria.     

Epithelial cancer cells exhibit different electrical properties when cultured in 2D and 3D environments

Background

Many drug development and toxicology studies are performed using cells grown in monolayers in well-plates and flasks, despite the fact that these are widely held to be different to cells found in the native environment. 3D, tissue engineered, organotypical tissue culture systems have been developed to be more representative of the native tissue environment than standard monolayer cultures. Whilst the biochemical differences between cells grown in 2D and 3D culture have been explored, the changes on the electrophysiological properties of the cells have not.

Methods

We compared the electrophysiological properties of primary normal oral keratinocytes (nOK) and cancerous abnormal oral keratinocytes (aOK), cultured in standard monolayer and reconstituted 3D organotypical tissue cultures. The electrophysiological properties of populations of the cells were analysed using dielectrophoresis. The intracellular conductivity of aOK was significantly increased when grown in organotypical cultures compared to counterpart cells grown in monolayer cultures.

Results

3D cultured aOK showed almost identical intracellular conductivity to nOK also grown in organotypical cultures, but significantly different to aOK grown in monolayers. The effective membrane capacitance of aOK grown in 3D was found to be significantly higher than nOK, but there was no significant difference between the electrophysiological properties of nOK grown in 2D and 3D cultures.

General significance

This work suggests that factors such as cell shape and cytoplasmic trafficking between cells play an important role in their electrophysiology, and highlights the need to use in vitro models more representative of native tissue when studying cell electrophysiological properties.     

Predicting the points of interaction of small molecules in the NF-κB pathway

Background  

The similarity property principle has been used extensively in drug discovery to identify small compounds that interact with specific drug targets. Here we show it can be applied to identify the interactions of small molecules within the NF-κB signalling pathway.     

Exploring the natural variation for seedling traits and their link with seed dimensions in tomato

The success of germination, growth and final yield of every crop depends to a large extent on the quality of the seeds used to grow the crop. Seed quality is defined as the viability and vigor attribute of a seed that enables the emergence and establishment of normal seedlings under a wide range of environments. We attempt to dissect the mechanisms involved in the acquisition of seed quality, through a combined approach of physiology and genetics. To achieve this goal we explored the genetic variation found in a RIL population of Solanum lycopersicum (cv. Moneymaker) x Solanum pimpinellifolium through extensive phenotyping of seed and seedling traits under both normal and nutrient stress conditions and root system architecture (RSA) traits under optimal conditions. We have identified 62 major QTLs on 21 different positions for seed, seedling and RSA traits in this population. We identified QTLs that were common across both conditions, as well as specific to stress conditions. Most of the QTLs identified for seedling traits co-located with seed size and seed weight QTLs and the positive alleles were mostly contributed by the S. lycopersicum parent. Co-location of QTLs for different traits might suggest that the same locus has pleiotropic effects on multiple traits due to a common mechanistic basis. We show that seed weight has a strong effect on seedling vigor and these results are of great importance for the isolation of the corresponding genes and elucidation of the underlying mechanisms.     

Characterization of high rate composting of vegetable market waste using Fourier transform-infrared (FT-IR) and thermal studies in three different seasons

Fourier transform-infrared (FT-IR), Thermogravimetry (TG), Differential thermal analyses (DTA) and Differential Thermogravimetric (DTG) studies of a mixture of vegetable waste, saw dust, tree leaves and cow dung for microbial activity (feedstock) and their compost were reported in three different seasons i.e. winter, spring and summer. The correlation between spectral studies and compost composition provide information regarding their stability and maturity during composting. FT-IR spectra were conferred the functional groups and their intensity and TG, DTG and DTA for wt. loss, rate of wt. loss and enthalpy change in compost. Weight loss in feedstock and compost at two different temperatures 250–350 and 350–500°C was found 38.06, 28.15% for inlet and 14.08, 25.67% for outlet zones in summer and 50.59, 29.76% for inlet and 18.08, 25.67% in outlet zones in spring season, higher (5–10%) than winter. The corresponding temperatures in DTA in the samples from inlet to outlet zone were; endotherm (100–200°C), due to dehydration, exotherm (300–320°C), due to peptidic structure loss and exotherm (449–474°C) due to the loss of polynuclear aromatic structures, which were higher by 4°C and 10–20°C and rate of wt. loss was higher by 5–10% in spring and summer season, respectively than winter season composting, reported regardless of the maturation age of the compost. Relative intensity of exotherms (300–320/449–474°C) gave the thermally more stable fractions of organic compound. Our results indicated that the rotary drum composting of organic matters in spring and summer season gave higher molecular complexity and stability than the winter season.     

UASB/Flash aeration enable complete treatment of municipal wastewater for reuse

A simple, efficient and cost-effective method for municipal wastewater treatment is examined in this paper. The municipal wastewater is treated using an upflow anaerobic sludge bed (UASB) reactor followed by flash aeration (FA) as the post-treatment, without implementing aerobic biological processes. The UASB reactor was operated without recycle, at hydraulic retention time (HRT) of 8 h and achieved consistent removal of BOD, COD and TSS of 60-70% for more than 12 months. The effect of FA on UASB effluent post-treatment was studied at different HRT (15, 30 and 60 min) and dissolved oxygen (DO) concentrations (low DO = 1-2 mg/L and high DO = 5-6 mg/L). The optimum conditions for BOD, COD and sulfide removal were 30-60 min HRT and high DO concentration inside the FA tank. The final effluent after clarification was characterized by BOD and COD values of 28-35 and 50-58 mg/L, respectively. Sulfides were removed by more than 80%, but the fecal coliform only by ~2 log. The UASB followed by FA is a simple and efficient process for municipal wastewater treatment, except for fecal coliform, enabling water and nutrients recycling to agriculture.     

Melatonergic Receptors (Mt1/Mt2) as a Potential Additional Target of Novel Drugs for Depression

Neurochemical Research - A complex pathogenesis involving several physiological systems is theorized to underline the development of depressive disorders. Depression is accompanied by circadian...     

Polymicrobial infection in Campylobacter jejuni enteritis in Karachi

Between September 1984 and April 1985, 210 stool specimens from patients with acute enteritis, in the city of Karachi, Pakistan were cultured for the presence of different enteropathogenic bacterial agents.Campylobacter jejuni was isolated from 62 (29.5%) of these specimens from children under 2 years of age. The highest incidence of C. jejuni was found among infants from birth to 6 months of age. The frequency of isolation gradually decreased among the 7–12-month-old infants and again among children from 13–24 months of age, respectively. C. jejuni was more frequently isolated in stool specimens from males (61.2%) and reflected the higher incidence of illness caused by C. jejuni in males. Our results emphasise the importance of this newly recognised enteropathogen, C. jejuni, in the etiology of diarrhoeal disease in Pakistan.