Modelled hydraulic redistribution by sunflower (Helianthus annuus L.) matches observed data only after including night‐time transpiration

The movement of water from moist to dry soil layers through the root systems of plants, referred to as hydraulic redistribution (HR), occurs throughout the world and is thought to influence carbon and water budgets and ecosystem functioning. The realized hydrologic, biogeochemical and ecological consequences of HR depend on the amount of redistributed water, whereas the ability to assess these impacts requires models that correctly capture HR magnitude and timing. Using several soil types and two ecotypes of sunflower (Helianthus annuus L.) in split‐pot experiments, we examined how well the widely used HR modelling formulation developed by Ryel et al. matched experimental determination of HR across a range of water potential driving gradients. H. annuus carries out extensive night‐time transpiration, and although over the last decade it has become more widely recognized that night‐time transpiration occurs in multiple species and many ecosystems, the original Ryel et al. formulation does not include the effect of night‐time transpiration on HR. We developed and added a representation of night‐time transpiration into the formulation, and only then was the model able to capture the dynamics and magnitude of HR we observed as soils dried and night‐time stomatal behaviour changed, both influencing HR.     

Population Dynamics of Breeding Mallards in the Great Lakes States

Abstract: Mallard (Anas platyrhynchos) populations in the United States portion of the Great Lakes region increased through the 1990s but have since declined. To promote sustainable growth of this population, managers need to understand how perturbation of vital rates will affect annual population growth rate (Λ). We developed a stage-based model representing the female mallard population in the Great Lakes using vital rates generated from a landscape-level study documenting reproductive parameters from 2001 to 2003. We conducted perturbation analyses (i.e., sensitivity analyses) to identify vital rates that most influence Λ and variance decomposition analyses to determine the proportion of variation in Λ explained by variation in each vital rate. Perturbation analyses indicated that Λ was most sensitive to changes in nonbreeding survival, duckling survival, and nest success. Therefore, changes in these vital rates would be expected to result in the greatest ΔΛ. Process variation in breeding season parameters accounted for 63% of variation in Λ. Breeding season parameters explaining the most variation were duckling survival (32%) and nest success (16%). Survival of adult females outside the breeding season accounted for 36% of variation in Λ. Harvest derivation, high harvest, and high sensitivity of Λ to nonbreeding survival for Great Lakes female mallards suggests there is a strong potential for managing the Great Lakes mallard population via harvest management. Because Λ was highly sensitive to changes in duckling survival, we suggest programs that emphasize wetland protection, enhancement, and restoration as a management strategy to improve population growth for breeding mallards.     

Subgenus Systematics of Acanthamoeba: Four Nuclear 18S rDNA Sequence Types

ABSTRACT Classification of Acanthamoeba at the subgenus level has been problematic, but increasing reports of Acanthamoeba as an opportunistic human pathogen have generated an interest in finding a more consistent basis for classification. Thus, we are developing a classification scheme based on RNA gene sequences. This first report is based on analysis of complete sequences of nuclear small ribosomal subunit RNA genes ( Rns ) from 18 strains. Sequence variation was localized in 12 highly variable regions. Four distinct sequence types were identified based on parsimony and distance analyses. Three were obtained from single strains: Type T1 from Acanthamoeba castellanii V006, T2 from Acanthamoeba palestinensis Reich, and T3 from Acanthamoeba griffini S-7. T4, the fourth sequence type, included 15 isolates classified as A. castellanii, Acanthamoeba polyphaga, Acanthamoeba rhysodes , or Acanthamoeba sp., and included all 10 Acanthamoeba keratitis isolates. Interstrain sequence differences within T4 were 0%–4.3%, whereas differences among sequence types were 6%–12%. Branching orders obtained by parsimony and distance analyses were inconsistent with the current classification of T4 strains and provided further evidence of a need to reevaluate criteria for classification in this genus. Based on this report and others in preparation, we propose that Rns sequence types provide the consistent quantititive basis for classification that is needed.     

Clinical Studies and Physiological Properties of Hopkins-2 Haemoglobin

HAEMOGLOBIN Hopkins-2 (Ho-2) was discovered in a family in which haemoglobin S was also present¹. Independent segregation of the two abnormal haemoglobins provided the first convincing evidence that two genetic loci are concerned with synthesis of the haemoglobin molecule^1,2. Subsequently, evidence was obtained that the abnormality in haemoglobin Ho-2 is in the alpha chain³, whereas the lesion in haemoglobin S is in the beta chain of globin. We have reported the structural abnormality in Ho-2 and we now present a revised pedigree and the clinical status of carriers; we attempt to relate these findings to functional abnormalities exhibited by the haemoglobin.     

Factors Affecting Golden-Cheeked Warbler Nest Survival in Urban and Rural Landscapes

ABSTRACT We evaluated hypotheses concerning temporal, landscape, and habitat effects on nest survival of golden-cheeked warblers (Dendroica chrysoparia) in an urban and a rural landscape during the breeding seasons of 2005 and 2006 in central Texas, USA. We found support for temporal effects of year and cubic effect of date and included them in candidate models that evaluated habitat and landscape effects. Nest survival was lower in 2006 than in 2005 and decreased nonlinearly as the breeding season progressed. We found support for edge effects with decreased nest survival nearer edges and in areas with increased open edge density (wooded habitat abutting open habitat) or decreased trail density. However, confidence intervals for the model-averaged odds ratios overlapped 1.0 for all edge variables. Overall daily survival rate was 0.964 (95% CI = 0.949-0.975), resulting in a 25-day period survival of 0.398 (95% CI = 0.269-0.524). Period survival in Austin's urban landscape (0.399, 95% CI = 0.270-0.526) was similar to survival in Fort Hood's rural landscape (0.396, 95% CI = 0.261-0.528). Both landscapes likely support self-sustaining populations based on reasonable assumptions for adult survival and number of nesting attempts. We suggest that some large urban preserves can provide breeding habitat of comparable quality to rural locations and recommend protecting large parcels (>100 ha) of breeding habitat with limited fragmentation and reducing the amount of wooded edge abutting open habitat to ensure nest survival regardless of their landscape context.     

Influence of simulated climate change and eutrophication on three‐spined stickleback populations: a large scale mesocosm experiment

1. Shallow lakes and their ectothermic inhabitants are particularly vulnerable to the effects of climatic warming. These impacts are likely to depend on nutrient loading, especially if the combination of warming and eutrophication leads to severe hypoxia. 2. To investigate effects of realistic warming and nutrient loading on a fish species with high tolerance of warming and hypoxia, we observed population changes and timing of reproduction of three‐spined sticklebacks in 24 outdoor shallow freshwater ecosystems with combinations of temperature (ambient and ambient +4 °C) and three nutrient treatments over 16 months. 3. Warming reduced stickleback population biomass by 60% (population size by 76%) and nutrient‐addition reduced biomass by about 80% (population size 95%). Nutrients and warming together resulted in extinction of the stickleback populations. These losses were mainly attributed to the increased likelihood of severe hypoxia in heated and nutrient‐addition mesocosms. 4. Warming of nutrient‐rich waters can thus have dire consequences for freshwater ectotherm populations. The loss even of a hardy fish suggests a precarious future for many less tolerant species in such eutrophic systems under current climate change predictions.     

Comprehensive paternity assignment: genotype,spatial location and social status in song sparrows,Melospiza Melodia

Comprehensive, accurate paternity assignment is critical to answering numerous questions in evolutionary ecology. Yet, most studies of species with extra‐pair paternity (EPP) fail to assign sires to all offspring. Common limitations include incomplete and biased sampling of offspring and males, particularly with respect to male location and social status, potentially biasing estimated patterns of paternity. Studies that achieve comprehensive sampling and paternity assignment are therefore required. Accordingly, we genotyped virtually all males and >99% of 6‐day‐old offspring over 16 years in a song sparrow (Melospiza melodia) population and used three complementary statistical methodologies to attempt complete paternity assignment for all 2207 offspring. Assignments were highly consistent across maximum likelihood methods that used solely genotype data, and heuristic and integrated Bayesian analyses that included data describing individual locations. Sires were assigned to >99% of all genotyped offspring with ≥95% confidence, revealing an EPP rate of c. 28%. Extra‐pair sires primarily occupied territories neighbouring their extra‐pair offspring; spatial location was therefore highly informative for paternity assignment. EPP was biased towards paired territorial males, although unpaired territorial and floater males sired c. 13% of extra‐pair offspring. Failing to sample and include unpaired males as candidate sires would therefore substantially reduce assignment rates. These analyses demonstrate the integration of genetic and ecological information to achieve comprehensive paternity assignment and direct biological insight, illustrate the potential biases that common forms of incomplete sampling could have on estimated patterns of EPP, and provide an essential basis for understanding the evolutionary causes and consequences of EPP.     

High rates of infidelity in the Grey Fantail Rhipidura albiscapa suggest that testis size may be a better correlate of extra‐pair paternity than sexual dimorphism

The Grey Fantail Rhipidura albiscapa is a socially monogamous passerine endemic to Australia. Behavioural and morphological clues point to opposing conclusions as to its breeding system; sexual monomorphism and monochrome colorations suggest monogamy, whereas relatively large testes and a prominent cloacal protruberance are more indicative of multiple mating and sperm competition. We used five highly variable microsatellite loci to investigate the genetic breeding system of this species. Paternity was assigned to 49 of 69 (71%) offspring tested and the overall rate of partner infidelity was high, with 55% of offspring being sired by an extra‐pair male and 64% of all clutches containing extra‐pair young. This puts the Grey Fantail amongst the most promiscuous socially monogamous species yet studied. Where extra‐pair fathers were identified, these were invariably in neighbouring territories, and although larger males did not gain more paternities overall, extra‐pair offspring tended to be fathered by larger males than expected by chance. We interpret our findings in light of some of the potential costs and benefits associated with extra‐pair paternity.     

Ecological consequences of ontogenetic changes in head shape and bite performance in the Jamaican lizard Anolis lineatopus

It has been documented extensively that body size affects the physiology and musculoskeletal function of organisms. However, less well understood is how body size affects the ecology of organisms through its effects on physiology and performance. We explored the effects of body size on morphology and performance in different ontogenetic classes and sexes of a common Anolis lizard ( A. lineatopus ). Next, we tested whether these morphological and performance differences may affect functional aspects of the diet such as prey size and prey hardness. Our data showed that males, females and juveniles differ significantly in head size, head shape and bite force. Multiple regression models indicated that head shape and bite force are significantly correlated to prey size and hardness. Yet juveniles had relatively large heads and bit disproportionately hard for their size, allowing them to eat prey as large as those of females. However, for a given prey size, males and females ate more robust prey than did juveniles. Additionally, males ate relatively harder prey than did juveniles. These data suggest that: (1) body size affects the dietary ecology of animals through its effect on head size and bite force; (2) changes in head morphology independent of changes in overall size also have important effects on performance and diet.  © 2006 The Linnean Society of London, Biological Journal of the Linnean Society , 2006, 89 , 443–454.