Quantifying components of risk for European woody species under climate change

Estimates of species extinction risk under climate change are generally based on differences in present and future climatically suitable areas. However, the locations of potentially suitable future environments (affecting establishment success), and the degree of climatic suitability in already occupied and new locations (affecting population viability) may be equally important determinants of risk. A species considered to be at low risk because its future distribution is predicted to be large, may actually be at high risk if these areas are out of reach, given the species' dispersal and migration rates or if all future suitable locations are only marginally suitable and the species is unlikely to build viable populations in competition with other species. Using bioclimatic models of 17 representative European woody species, we expand on current ways of risk assessment and suggest additional measures based on (a) the distance between presently occupied areas and areas predicted to be climatically suitable in the future and (b) the degree of change in climatic suitability in presently occupied and unoccupied locations. Species of boreal and temperate deciduous forests are predicted to face higher risk from loss of climatically suitable area than species from warmer and drier parts of Europe by 2095 using both the moderate B1 and the severe A1FI emission scenario. However, the average distance from currently occupied locations to areas predicted suitable in the future is generally shorter for boreal species than for southern species. Areas currently occupied will become more suitable for boreal and temperate species than for Mediterranean species whereas new suitable areas outside a species' current range are expected to show greater increases in suitability for Mediterranean species than for boreal and temperate species. Such additional risk measures can be easily derived and should give a more comprehensive picture of the risk species are likely to face under climate change.     

Nitrous oxide fluxes from a grain–legume crop (narrow‐leafed lupin) grown in a semiarid climate

Understanding nitrous oxide (N₂O) fluxes from grain–legume crops in semiarid and arid regions is necessary if we are to improve our knowledge of global terrestrial N₂O losses resulting from biological N₂ fixation. N₂O fluxes were measured from a rain‐fed soil, cropped to a grain–legume in a semiarid region of southwestern Australia for 1 year on a subdaily basis. The site included plots planted to narrow‐leafed lupin (Lupinus angustifolius; ‘lupin’) and plots left bare (no lupin). Fluxes were measured using soil chambers connected to a fully automated system that measured N₂O by gas chromatography. Daily N₂O fluxes were low (?0.5 to 24 g N₂O‐N ha^?1 day^?1) and not different between treatments, culminating in an annual loss of 127 g N₂O‐N ha^?1. Greatest daily N₂O fluxes occurred from both treatments in the postharvest period, and following a series of summer and autumn rainfall events. At this time of the year, soil conditions were conducive to soil microbial N₂O production: elevated soil water contents, increased inorganic nitrogen (N) and dissolved organic carbon concentrations, and soil temperatures generally > 25 °C; furthermore, there was no active plant growth to compete for mineralized N. N₂O emissions from the decomposition of legume crop residue were low, and approximately half that predicted using the currently recommended IPCC methodology. Furthermore, the contribution of the biological N₂ fixation process to N₂O emissions appeared negligible in the present study, supporting its omission as a source of N₂O from the IPCC methodology for preparing national greenhouse gas inventories.     

The plagiosaurid temnospondyl Plagiosuchus pustuliferus (Amphibia: Temnospondyli) from the Middle Triassic of Germany: anatomy and functional morphology of the skull

The cranial anatomy of the plagiosaurid temnospondyl Plagiosuchus pustuliferus, from the Middle Triassic of Germany, is described in detail on the basis of a newly discovered skull and mandibular material. The highly derived skull is characterized by huge orbitotemporal fenestrae, a reduction of the circumorbital bones – the prefrontal, postfrontal and (probably) postorbital are lost – and the expansion of the jugal to occupy most of the lateral skull margin. Ventrally the extremely long subtemporal vacuities correlate with the elongate adductor fossa of the mandible. The dentition is feebly developed on both skull and mandible. Ossified ?ceratobranchials and ‘branchial denticles’ indicate the presence of open gills clefts in life. The remarkably divergent cranial morphology of P. pustuliferus highlights the extraordinary cranial diversity within the Plagiosauridae, probably unsurpassed within the Temnospondyli. Specific structural aspects of the skull – including an extremely short marginal tooth row, feeble dentition and an elongated chamber for adductor musculature – together with evidence for a hyobranchial skeleton, suggests that P. pustuliferus utilized directed suction feeding for prey capture. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 348–373.     

Unravelling the genetic complexity of sorghum seedling development under low‐temperature conditions

Sorghum is a promising alternative to maize for bioenergy production in Europe; however, its use is currently limited by poor adaptation to low temperatures during and after germination. We collected multi‐trait phenotype data under optimal and suboptimal temperatures in a genetically diverse recombinant inbred line (RIL) mapping population showing contrasting segregation patterns for pre‐ and post‐emergence chilling tolerance. Germination, emergence, seedling development, root architecture and seedling survival were assessed in two different seedlots. Emergence and root establishment were found to be the key determinants of development and survival under chilling stress. Highly interactive epistatic quantitative trait loci (QTL) hotspots, including a previously unknown QTL on Sb06 with a significant effect on prolonged chilling survival, were found to regulate different physiological mechanisms contributing to maintenance of growth and development despite the chilling temperatures. The major QTL regions harbour promising candidate genes with known roles in abiotic stress tolerance. Identification of loci in the QTL hotspot regions conferring maintenance of cell division and growth under early chilling stress represents a promising step towards breeding for successful establishment of sorghum in temperate climates.     

Determination of Affinity and Activity of Ligands at the Human Neuropeptide Y Y4 Receptor by Flow Cytometry and Aequorin Luminescence

Fluorescence-labeled neuropeptide Y (NPY) has been used in flow cytometric binding assays for the determination of affinity constants of NPY Y₁, Y₂, and Y₅ receptor ligands. Because the binding of fluorescent NPY is insufficient for competition studies at the human Y₄ receptor (hY₄R), we replaced Glu-4 in hPP with Lys for the derivatization with cyanine-5. Because cy5-[K⁴]hPP has high affinity (K_d 5.6 nM) to the hY₄R, it was used as a probe in a flow cytometric binding assay. Specific binding of cy5-[K⁴]hPP to hY₄R was visualized by confocal microscopy. The hY₄R, the chimeric G protein G_qi5 and mitochondrially targeted apoaequorin were stably coexpressed in CHO cells. Aequorin luminescence was quantified in a microplate reader and by a CCD camera. By application of these methods 3-cyclohexyl-N-[(3-1H-imidazol-4-ylpropylamino)(imino)methyl]propanamide (UR-AK49) was discovered as the first nonpeptidic Y₄R antagonist (pK_i 4.17), a lead to be optimized in terms of potency and selectivity.     

Light-dependent Anaerobic Induction of the Maize Glyceraldehyde-3-Phosphate Dehydrogenase 4 (GapC4) Promoter in Arabidopsis thaliana and Nicotiana tabacum

The maize glyceraldehyde-3-phosphate dehydrogenase 4 (GapC4)promoter confers strong and specific anaerobic gene expressionin tobacco (Nicotiana tabacum) and potato (Solanum tuberosum).Here we show that the promoter is also anaerobically inducedin Arabidopsis thaliana. Histochemical analysis demonstratesthat the promoter is anaerobically induced in roots, leaves,stems and flower organs. Surprisingly, the strong anaerobicinduction of the promoter is dependent on light and on the substitutionof oxygen with carbon dioxide. High carbon dioxide concentrationalone does not induce the promoter in the presence of oxygenand light. If anaerobic conditions are generated under completedarkness or if plants are submerged, no induction above backgroundis observed. When transgenic tobacco harbouring a GapC4 promoter–reportergene construct is analysed for light dependent anaerobic induction,the results are indistinguishable from those with arabidopsis.The implications for using the GapC4 promoter as an anaerobicreporter for monitoring alterations in the anaerobic signaltransduction pathway are discussed.     

Ontogeny and homology of the neural complex of otophysan Ostariophysi

The development and homology of the neural complex in the ostariophysan subgroup Otophysi were studied, including for the first time representatives of all four major otophysan lineages. Previous hypotheses concerning the homology of the different elements of the neural complex have also been reviewed and these are discussed in light of our new findings. We found that supradorsal cartilages, paired autogenous elements at the medial side of the neural arches, play a previously unrecognized major role during the ontogeny and evolution of the neural complex. In most otophysan taxa, supradorsals 3 and 4 fuse with supraneurals 2 and 3 (cypriniforms) or supraneural 3 (characiforms, some siluriforms, gymnotiforms) during ontogeny to form the neural complex. In the majority of siluriforms, the neural complex is exclusively formed by supradorsals 3 and 4. In loricarioid siluriforms, a neural complex is missing, the fourth neural arch fuses to the occiput in development, and the first free vertebra is the fifth. Of the four otophysan subgroups, siluriforms are the most and cypriniforms the least diverse in the structure and development of their neural complex.  © 2006 The Linnean Society of London, Zoological Journal of the Linnean Society , 2006, 147 , 301–330.     

Leaf growth dynamics of two congener gymnosperm tree species reflect the heterogeneity of light intensities given in their natural ecological niche

Chamaecyparis obtusa var. formosana and Chamaecyparis formosensis are congener gymnosperm tree species native to Taiwan cloud forests; occupying different niches there. While the seedlings of C. formosensis occur predominantly under bright conditions in large forest gaps, seedlings of C. obtusa var. formosana are mainly found below the canopy of mature forests or in small gaps. It is well known that congener species occupying different niches typically differ in several ecophysiological and morphological traits, but the differences in growth dynamics of such species are still totally unclear, as the diurnal growth dynamics of gymnosperm leaves have not been investigated before. Modern methods of digital image sequence processing were used in this study to analyse the leaf growth dynamics of the two species. We found that both species show similar base–tip gradients and pronounced diurnal growth rhythms with maxima in the evening. Differences between the two species concerning their growth dynamics correlated closely with their ecological amplitudes and abundances. Chamaecyparis obtusa var. formosana grew faster than C. formosensis in low light intensity, typical for closed-canopy situations, and reacted quickly by increasing or decreasing growth rate when light intensity changed within a range typically found below small canopy gaps. In contrast to this, C. formosensis grew better in light intensities typical for open vegetation situations, but reacted slower towards changes of light intensity. Based on those results, the hypothesis can be developed that fluctuations of leaf growth dynamics reflect heterogeneities of the light environment within the niche occupied by a given species.