The Chimonanthus salicifolius genome provides insight into magnoliid evolution and flavonoid biosynthesis

Chimonanthus salicifolius, a member of the Calycanthaceae of magnoliids, is one of the most famous medicinal plants in Eastern China. Here, we report a chromosome‐level genome assembly of C. salicifolius, comprising 820.1 Mb of genomic sequence with a contig N50 of 2.3 Mb and containing 36 651 annotated protein‐coding genes. Phylogenetic analyses revealed that magnoliids were sister to the eudicots. Two rounds of ancient whole‐genome duplication were inferred in the C. salicifolious genome. One is shared by Calycanthaceae after its divergence with Lauraceae, and the other is in the ancestry of Magnoliales and Laurales. Notably, long genes with > 20 kb in length were much more prevalent in the magnoliid genomes compared with other angiosperms, which could be caused by the length expansion of introns inserted by transposon elements. Homologous genes within the flavonoid pathway for C. salicifolius were identified, and correlation of the gene expression and the contents of flavonoid metabolites revealed potential critical genes involved in flavonoids biosynthesis. This study not only provides an additional whole‐genome sequence from the magnoliids, but also opens the door to functional genomic research and molecular breeding of C. salicifolius.     

四川省蝶类物种组成及名录

通过整理鉴定四川大学自然博物馆馆藏的100多年间采自四川省的1万余号蝶类标本,最早的四川蝶类标本(宽带凤蝶西部亚种Papilio nephelus chaon)采于1910年,结合文献和专著资料,参考《中国蝶类志》的分类系统,得到四川省蝶类644种,隶属于12科240属。其中,蛱蝶科Nymphalidae 162种、弄蝶科Hesperiidae 125种、眼蝶科Satyridae 114种、灰蝶科Lycaenidae 100种、粉蝶科Pieridae 59种、凤蝶科Papilionidae 45种、蚬蝶科Riodinidae 14种、绢蝶科Parnassiidae 11种、斑蝶科Danaidae 8种、环蝶科Amathusiidae 4种、喙蝶科Libytheidae 1种、珍蝶科Acraeidae 1种。四川省蝶类物种组成丰富,其中,蛱蝶科、弄蝶科、眼蝶科和灰蝶科物种数均超过或达到100种。建议在全省范围内选择不同生境建立长期监测点,持续监测蝶类物种多样性分布及变化情况,这对于保护全省生态环境和维持生物多样性都是至关重要的。建议尽快开展相关研究,包括四川省蝶类的经典分类学、系统发育及区系、生物地理学、生态学、行为学和进化生态学等研究。     

播种季节和种植方式对多年生苦荞主要农艺性状的影响

该研究选取六个多年生苦荞新品系,对春季、秋季直播与秋季再生其主要农艺性状进行调查。结果表明:(1)不同播种季节对多年生苦荞新品系主花序的花粉可育率、总结实率、有效结实率、植株株高、主茎粗、主茎分枝数、主茎节数、籽粒百粒重、单株粒数、单株产量的影响均达到显著或极显著水平;秋播主花序花粉可育率、总结实率、有效结实率、植株主茎分枝数、籽粒百粒重、单株粒数、单株产量均极显著高于春播;植株株高、主茎粗、主茎节数均极显著低于春播;主花序花朵大小、籽粒种子长宽比无显著差异。(2)不同种植方式对主花序花粉可育率、有效结实率、植株主茎节数及籽粒百粒重的影响达到显著或极显著水平;秋季再生主花序花粉可育率、籽粒单株粒数显著高于秋季直播;主花序有效结实率、植株主茎粗、主茎节数、籽粒百粒重显著低于秋季直播;主花序花朵大小、总结实率、植株株高、主茎分枝数、籽粒种子长宽比、单株产量无显著差异;相关分析表明,各生长季节下主花序有效结实率及单株粒数与单株产量的相关系数均最高。(3)所有参试品系中,1612-241秋季直播的单株产量显著高于其他品系; 1612-16、1612-33秋季再生单株产量较正季优势显著。该研究结果有助于筛选出适宜一季播种两季收获的优良品系,为今后多年生苦荞的选择育种提供线索基础。     

金山西部地区5~7岁儿童H.pylori感染调查及与胃蛋白酶原相关性分析

目的了解金山西部地区5~7岁健康儿童幽门螺杆菌(H.pylori)感染情况,并探讨其与胃蛋白酶原(PG)的相关性。方法选取2019年3-5月金山地区5~7岁健康儿童共464例,分析不同年龄及性别幼儿H.pylori感染、胃蛋白酶原Ⅰ(PGⅠ)、胃蛋白酶原Ⅱ(PGⅡ)水平以及PGⅠ/PGⅡ比值的差异,采用Spearman相关性分析H.pylori感染与PGⅠ、PGⅡ水平和PGⅠ/PGⅡ的相关性。结果5~7岁儿童H.pylori阳性率达11.96%,5岁组、6岁组、7岁组儿童H.pylori阳性率分别为10.07%、12.96%、13.73%,阳性率逐年升高。不同年龄和性别幼儿的PGⅠ、PGⅡ水平和PGⅠ/PGⅡ间差异有统计学意义(P<0.05)。H.pylori是否感染与PGⅠ/PGⅡ呈显著正相关,与PGⅠ/PGⅡ呈显著负相关(P<0.05)。结论本地区5~7岁儿童H.pylori感染率相对较低且有着自身的特点,而且H.pylori感染与血清PG水平的关系密切,未来应加强对幼儿H.pylori感染与血清PG 水平的监测及防治。     

miRNA参与植物胚和胚乳发育调控的研究进展

籽粒性状是构成产量的重要基础,是粮食产量的最终体现,也是育种最复杂的性状之一。籽粒主要由胚和胚乳组成,胚乳是积累和贮藏营养物质的场所,主要为胚的萌发和生长提供营养。胚乳细胞的发育、增殖和充实情况决定了籽粒的重量和品质。籽粒发育是一个非常复杂的生物过程,涉及许多基因的时空表达以及转录水平和转录后水平的调控。微小RNA（microRNAs,miRNAs）是一类内源性的非编码小RNA（21～24 nt）,可通过靶向降解和翻译抑制在转录后水平调控植物基因表达。miRNA及其靶基因组成精密的调控网络参与籽粒的发育。基于此,概述了植物miRNAs的生成及作用机制,综述了miRNAs在植物胚和胚乳发育中的调控功能研究进展,以期为进一步鉴定与玉米籽粒发育相关的miRNAs并解析其调控功能提供更好的研究方向。     

Mass loss and nutrient release during the decomposition of sixteen types of plant litter with contrasting quality under three precipitation regimes

Mass loss and nutrient release during litter decomposition drive biogeochemical cycling in terrestrial ecosystems. However, the relationship between the litter decomposition process and the decomposition stage, precipitation, and litter quality has rarely been addressed, precluding our understanding of how litter decomposition regulates nutrient cycling in various ecosystems and their responses to climate change. In this study, we measured mass loss as well as carbon and nutrient releases during the decomposition of 16 types of leaf litter under three precipitation treatments over 12 months in a common garden experiment (i.e., using standardized soil and climatic conditions). Sixteen types of leaves were divided into three functional groups (evergreen, deciduous, and herbaceous). The objectives were to understand the effects of decomposition stages and precipitation regimes on litter decomposition and to examine the relationship between this effect and chemical properties. The mass loss and release of nitrogen and potassium were significantly higher in the 6‐ to 12‐month stage of decomposition (high temperature and humidity) than in the 0‐ to 6‐month stage. Phosphorus was relatively enriched in evergreen leaves after 6 months of decomposition. The rates of mass loss and nutrient release were significantly greater in herbaceous than in deciduous and evergreen leaves. Increasing precipitation from 400 to 800 mm accelerated mass loss and potassium release but decreased phosphorus release in the 0‐ to 6‐month stage of decomposition. These results highlighted the contribution to and complexity of litter chemical properties in litter decomposition.     

碳纳米管固定化纤维素酶的最佳工艺研究

纤维素酶在环保、医药、食品等领域都具有广泛的应用前景,但由于纤维素酶的生产成本较高,生物活性较低,使得纤维素酶的应用受到了限制。为了寻找一种固定化纤维素酶的方法,使酶可以重复多次使用,首次以多壁碳纳米管为载体固定化纤维素酶,研究功能化的多壁碳纳米管固定化纤维素酶的固定化条件,采用正交试验对酶固定化中的主要条件进行优化,并通过傅里叶变换红外光谱仪对多壁碳纳米管（multiwalled carbon nanotube,MWCNTs）、纤维素酶及固定化纤维素酶的结构进行表征。结果表明,固定化纤维素酶的最佳工艺条件为：酶浓度5 mg·mL-1,温度40 ℃,pH 5.0,固定化时间3 h;通过傅里叶变换红外光谱证实纤维素酶成功固定到多壁碳纳米管上。     

The correlation of microRNA-499 rs3746444 T>C locus with the susceptibility of gastric cancer: from a case–control study to a meta-analysis

The relationship between rs3746444 T>C single-nucleotide polymorphism (SNP) in microRNA (mir)-499 and risk of gastric cancer (GC) has been widely investigated. However, the association was still unconfirmed. Here, we first recruited 490 GC patients and 1476 controls, and conducted a case-control study. And we did not find any association between rs3746444 T>C SNP polymorphism and risk of GC. Subsequently, we conducted a meta-analysis to explore the association of mir-499 rs3746444 polymorphism with GC development. Two authors searched the PubMed and EMBASE databases up to October 15, 2019 independently. Finally, nine literatures involving 12 independent studies were included. In total, 3954 GC cases and 9745 controls were recruited for meta-analysis. The results suggested that allele model, homozygote model and recessive model could increase the risk of overall GC (P = 0.002, 0.009 and 0.013, respectively). When we excluded the studies violated HWE, this association was also found in allele model (P = 0.020) and dominant model (P= 0.044). In subgroup analyses, we identified that rs3746444 SNP in mir-499 increased the risk of GC in Asians and gastric cardiac adenocarcinoma (GCA) subgroups. No significant bias of selection was found (all P>0.1). Test of sensitivity analysis indicated that our findings were stable. Additionally, we found that the power value was 0.891 in the allele model, suggesting the reliability of our findings. In summary, our analysis confirmed the association between rs3746444 and the risk of GC, especially in Asians and in patients with GCA.     

Variation in rare earth element (REE), aluminium (Al) and silicon (Si) accumulation among populations of the hyperaccumulator Dicranopteris linearis in southern China

Plant and Soil - Dicranopteris linearis is a rare earth element (REE), aluminium (Al) and silicon (Si) hyperaccumulator plant which occurs in southern China. To date, there have been no studies on...