Soil Heavy Metal Pollution and Risk Assessment in Shenyang Industrial District,Northeast China

To investigate the soil heavy metal pollution characteristics and ecological risk factors, 42 samples and six typical soil profiles were collected from the Shenyang industrial district in northeast China and were analyzed for contents of titanium (Ti), copper (Cu), lead (Pb), zinc (Zn), cobalt (Co), nickel (Ni), chromium (Cr) and arsenic (As). Through statistical analysis, it was found that the mean concentrations were higher than their background values (Ti = 4.77>3.8g/kg, Cu = 33.75>22.6 mg/kg, Pb = 45.95>26 mg/kg, Zn = 81.54>74.2 mg/kg, Co = 12.91>12.7 mg/kg, Ni = 32.26>26.9 mg/kg, Cr = 83.36>61 mg/kg and As = 13.69>11.2 mg/kg) but did not exceed their corresponding pollution limits for the Chinese Environmental Quality Standard for Soils (State Environmental Protection Administration of China, 1995). There were contamination hotspots that may be caused by human activities such as smelting plants and sewage irrigation. The Enrichment Factor and Ecological Risk Index were used to identify the anthropogenic contamination and ecological risks of heavy metals. Soil in the study area could be considered lightly or partially polluted by heavy metals. According to clustering analysis, distinct groups of heavy metals were discriminated between natural or anthropogenic sources.     

Identification and characterization of SNJ2, the first temperate pleolipovirus integrating into the genome of the SNJ1‐lysogenic archaeal strain

Proviral regions have been identified in the genomes of many haloarchaea, but only a few archaeal halophilic temperate viruses have been studied. Here, we report a new virus, SNJ2, originating from archaeal strain Natrinema sp. J7‐1. We demonstrate that this temperate virus coexists with SNJ1 virus and is dependent on SNJ1 for efficient production. Here, we show that SNJ1 is an icosahedral membrane‐containing virus, whereas SNJ2 is a pleomorphic one. Instead of producing progeny virions and forming plaques, SNJ2 integrates into the host tRNA^Met gene. The virion contains a discontinuous, circular, double‐stranded DNA genome of 16 992 bp, in which both nicks and single‐stranded regions are present preceded by a ‘GCCCA’ motif. Among 25 putative SNJ2 open reading frames (ORFs), five of them form a cluster of conserved ORFs homologous to archaeal pleolipoviruses isolated from hypersaline environments. Two structural protein encoding genes in the conserved cluster were verified in SNJ2. Furthermore, SNJ2‐like proviruses containing the conserved gene cluster were identified in the chromosomes of archaea belonging to 10 different genera. Comparison of SNJ2 and these proviruses suggests that they employ a similar integration strategy into a tRNA gene.     

A genome‐wide survey reveals abundant rice blast R genes in resistant cultivars

Plant resistance genes (R genes) harbor tremendous allelic diversity, constituting a robust immune system effective against microbial pathogens. Nevertheless, few functional R genes have been identified for even the best‐studied pathosystems. Does this limited repertoire reflect specificity, with most R genes having been defeated by former pests, or do plants harbor a rich diversity of functional R genes, the composite behavior of which is yet to be characterized? Here, we survey 332 NBS‐LRR genes cloned from five resistant Oryza sativa (rice) cultivars for their ability to confer recognition of 12 rice blast isolates when transformed into susceptible cultivars. Our survey reveals that 48.5% of the 132 NBS‐LRR loci tested contain functional rice blast R genes, with most R genes deriving from multi‐copy clades containing especially diversified loci. Each R gene recognized, on average, 2.42 of the 12 isolates screened. The abundant R genes identified in resistant genomes provide extraordinary redundancy in the ability of host genotypes to recognize particular isolates. If the same is true for other pathogens, many extant NBS‐LRR genes retain functionality. Our success at identifying rice blast R genes also validates a highly efficient cloning and screening strategy.     

不同来源甜高粱种质资源的表型遗传多样性分析

通过对主要农艺性状的方差分析及聚类分析,对194份不同来源的甜高粱种质资源进行了表型性状的遗传多样性分析。结果表明,不同来源品种间的性状差异较大,与中国品种相比,国外品种具有植株高大、生物产量高及含糖量高等优异性状,可用于国内资源的种质创新及品种改良。遗传距离为0.66时将所有资源划分为6类,各类群主要按农艺性状进行了划分。研究结果将为杂交育种的亲本选择提供理论参考。     

Screening,production, and characterization of dextranase from Catenovulum sp.

A psychrotolerant dextranase-producing bacterium was isolated from the Gaogong island seacoast near Jiangsu, China. The bacterium, denoted as DP03, was identified as Catenovulum sp. based on its phenotype, biochemical characteristics, and 16S rRNA gene comparison. The optimal enzyme production time, initial pH, temperature, and aeration conditions of strain DP03 were found to be 28 h, 8.0, 30 °C, and 25 % volume of liquid in 100-ml Erlenmeyer flasks, respectively. The ability of 1 % dextran T20 to induce dextranase was investigated. Dextranase from strain DP03 displayed its maximum activity at pH 8.0 and 40 °C and was found to be stable at 30 °C and over a broad range of pH values (pH 6–11). Scanning electron microscopy showed that dextranase from the isolate DP03 could at least partially prevent Streptococcus mutans from forming biofilms on glass coverslips.     

Role of Na+/Ca2+ Exchanger (NCX) in Modulating Postovulatory Aging of Mouse and Rat Oocytes

We studied the role of the Na⁺/Ca²⁺ exchanger (NCX) in modulating oocyte postovulatory aging by observing changes in NCX contents and activities in aging mouse and rat oocytes. Whereas the NCX activity was measured by observing oocyte activation following culture with NCX inhibitor or activator, the NCX contents were determined by immunohistochemical quantification. Although NCX was active in freshly-ovulated rat oocytes recovered 13 h post hCG injection and in aged oocytes recovered 19 h post hCG in both species, it was not active in freshly-ovulated mouse oocytes. However, NCX became active when the freshly-ovulated mouse oocytes were activated with ethanol before culture. Measurement of cytoplasmic Ca²⁺ revealed Ca²⁺ increases always before NCX activation. Whereas levels of the reactive oxygen species (ROS) and the activation susceptibility increased, the density of NCX member 1 (NCX1) decreased significantly with oocyte aging in both species. While culture with H₂O₂ decreased the density of NCX1 significantly, culture with NaCl supplementation sustained the NCX1 density in mouse oocytes. It was concluded that (a) the NCX activity was involved in the modulation of oocyte aging and spontaneous activation; (b) ROS and Na⁺ regulated the NCX activity in aging oocytes by altering its density as well as functioning; and (c) cytoplasmic Ca²⁺ elevation was essential for NCX activation in the oocyte.     

衰老对2种猕猴血液基因表达的影响及与人类的对比

衰老是导致免疫功能和代谢活动下降的危险因素.作为最常用的非人灵长类动物模型,猕猴属Macaca被用来探索与衰老过程相关的因素.为了比较2种猕猴和人类在衰老过程基因表达变化的异同,本研究收集比较了3个物种的血液转录组.在藏酋猴M.thibetana(TM)、普通猕猴M.mulatta(CR)和人类中分别获得了2523个、...     

Actinotetraoses I–K: Tetrasaccharide Metabolites Produced by an Insect‐Derived Actinobacteria,Amycolatopsis sp. HCa1

An isolate of rare actinobacteria strain Amycolatopsis sp. HCa1 obtained from the gut of grasshopper produced seven different metabolites in vitro. The metabolites isolated from its mycelia cakes were characterized by NMR and MS analyses. Actinotetraose hexatiglate (or tigloside; 1 ) with nonreducing glucotetraose skeleton was isolated as a major constituent; three new tetrasaccharide derivatives actinotetraoses I–K ( 2 – 4 , resp.) and three known actinotetraoses A–C ( 5 – 7 , resp.) were also isolated.