下辽河平原降雨中氮素的动态变化

为了了解降雨中氮对农田生态系统的影响,分析了2004-2006年下辽河平原连续3年定位收集的降雨观测资料与历史资料.结果表明:降雨中氮输入量季节变化显著,夏季最高,这主要与降雨量及空气中NH4 -N浓度变化有关;降雨中DON量与NO3--N含量相当,均接近24%,是雨水中氮的重要组分;与1985年相比,近3年降雨输入到该地区农田生态系统的年氮通量已有较大提高,降雨较多的2005年输入的无机氮量更是20年前的2倍以上;2004-2006年随降雨输入农田生态系统的氮平均占可利用肥料氮的28.3%,对农田生态系统有着重要影响.     

First record of Cricetops rodent in the Oligocene of southwestern China

The muroid Cricetops Matthew and Granger, 1923 commonly occurred in the Oligocene terrestrial deposits in central and northern Asia. Here we report the first record of Cricetops in the southern part of Asia. Isolated rodent molars named as a new species, Cricetops auster sp. nov., were discovered from the early Oligocene sediments at the Lijiawa locality in Yunnan Province in southwestern China. Compared to previously known Cricetops, C. auster is smaller than Cricetops dormitor Matthew and Granger, 1923 and Cricetops aeneus Shevyreva, 1965, but larger than Cricetops minor Wang, 1987. The cusps of C. auster are less conical. The ridges and crests are longer, higher and thicker. Relatively long and high crests, ridges and arms extending from the main cusps in the new species make those cusps more crescent in appearance than in C. dormitor, C. aeneus and C. minor. C. auster is a rare species in the Lijiawa mammalian fauna. Well-developed shearing tooth crests and ridges of C. auster probably suggest a different diet from the Cricetops from the northern part of Asia.     

Spectrin folding versus unfolding reactions and RBC membrane stiffness

Spectrin (Sp), a key component of the erythrocyte membrane, is routinely stretched to near its fully folded contour length during cell deformations. Such dynamic loading may induce domain unfolding as suggested by recent experiments. Herein we develop a model to describe the folding/unfolding of spectrin during equilibrium or nonequilibrium extensions. In both cases, our model indicates that there exists a critical extension beyond which unfolding occurs. We further deploy this model, together with a three-dimensional model of the junctional complex in the erythrocyte membrane, to explore the effect of Sp unfolding on the membrane's mechanical properties, and on the thermal fluctuation of membrane-attached beads. At large deformations our results show a distinctive strain-induced unstiffening behavior, manifested in the slow decrease of the shear modulus, and accompanied by an increase in bead fluctuation. Bead fluctuation is also found to be influenced by mode switching, a phenomenon predicted by our three-dimensional model. The amount of stiffness reduction, however, is modest compared with that reported in experiments. A possible explanation for the discrepancy is the occurrence of spectrin head-to-head disassociation which is also included within our modeling framework and used to analyze bead motion as observed via experiment.     

SCNVSim: somatic copy number variation and structure variation simulator

Background

Somatically acquired structure variations (SVs) and copy number variations (CNVs) can induce genetic changes that are directly related to tumor genesis. Somatic SV/CNV detection using next-generation sequencing (NGS) data still faces major challenges introduced by tumor sample characteristics, such as ploidy, heterogeneity, and purity. A simulated cancer genome with known SVs and CNVs can serve as a benchmark for evaluating the performance of existing somatic SV/CNV detection tools and developing new methods.

Results

SCNVSim is a tool for simulating somatic CNVs and structure variations SVs. Other than multiple types of SV and CNV events, the tool is capable of simulating important features related to tumor samples including aneuploidy, heterogeneity and purity.

Conclusions

SCNVSim generates the genomes of a cancer cell population with detailed information of copy number status, loss of heterozygosity (LOH), and event break points, which is essential for developing and evaluating somatic CNV and SV detection methods in cancer genomics studies.     

亚致死剂量杀虫剂对意蜂工蜂嗅觉敏感性的影响

喙伸反应(PER)试验适用于评价杀虫剂对蜜蜂行为的影响。本实验利用喙伸反应研究了亚致死剂量(LD50/100～LD50/10)溴氰菊酯和吡虫啉对意蜂Apis mellifera ligustica L.工蜂嗅觉敏感性的影响。结果发现,经口饲喂溴氰菊酯5ng和10ng后,工蜂对0.1%的蔗糖溶液的敏感性显著下降(P<0.05),水应激指数降低,但对0.3%,1%,3%,10%和30%的蔗糖溶液的敏感性没有显著变化;而经口饲喂吡虫啉0.3ng和0.6ng后,工蜂对上述各浓度蔗糖溶液的敏感性变化不明显,但其水应激指数升高。     

A hybrid model for erythrocyte membrane: a single unit of protein network coupled with lipid bilayer

To investigate the nanomechanics of the erythrocyte membrane we developed a hybrid model that couples the actin-spectrin network to the lipid bilayer. This model features a Fourier space Brownian dynamics model of the bilayer, a Brownian dynamics model of the actin protofilament, and a modified wormlike-chain model of the spectrin (including a cable-dynamics model to predict the oscillation in tension). This model enables us to predict the nanomechanics of single or multiple units of the protein network, the lipid bilayer, and the effect of their interactions. The present work is focused on the attitude of the actin protofilament at the equilibrium states coupled with the elevations of the lipid bilayer through their primary linkage at the suspension complex in deformations. Two different actin-spectrin junctions are considered at the junctional complex. With a point-attachment junction, large pitch angles and bifurcation of yaw angles are predicted. Thermal fluctuations at bifurcation may lead to mode-switching, which may affect the network and the physiological performance of the membrane. In contrast, with a wrap-around junction, pitch angles remain small, and the occurrence of bifurcation is greatly reduced. These simulations suggest the importance of three-dimensional molecular junctions and the lipid bilayer/protein network coupling on cell membrane mechanics.     

Lipid production by microalgae <Emphasis Type="Italic">Chlorella protothecoides</Emphasis> with volatile fatty acids (VFAs) as carbon sources in heterotrophic cultivation and its economic assessment

Volatile fatty acids (VFAs) that can be derived from food wastes were used for microbial lipid production by Chlorella protothecoides in heterotrophic cultures. The usage of VFAs as carbon sources for lipid accumulation was investigated in batch cultures. Culture medium, culture temperature, and nitrogen sources were explored for lipid production in the heterotrophic cultivation. The concentration and the ratio of VFAs exhibited significant influence on cell growth and lipid accumulation. The highest lipid yield coefficient and lipid content of C. protothecoides grown on VFAs were 0.187 g/g and 48.7 %, respectively. The lipid content and fatty acids produced using VFAs as carbon sources were similar to those seen on growth and production using glucose. The techno-economic analysis indicates that the biodiesel derived from the lipids produced by heterotrophic C. protothecoides with VFAs as carbon sources is very promising and competitive with other biofuels and fossil fuels.